Salvelinus sp. IW2-2015 (Arctic char): 111958111
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Entry
111958111 CDS
T05762
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
salp02000
]
111958111
03037 Cilium and associated proteins [BR:
salp03037
]
111958111
Transporters [BR:
salp02000
]
Other transporters
Pores ion channels [TC:
1
]
111958111
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111958111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
Piezo_TM1-24
COX16
Toddler
Motif
Other DBs
NCBI-GeneID:
111958111
NCBI-ProteinID:
XP_023835061
LinkDB
All DBs
Position
LG33:complement(9953084..9963526)
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AA seq
979 aa
AA seq
DB search
MPYHAPPPRLPPPLPHSPPSLGWVRVGRDGVAAFSPSEEPAVSIGLEDADEEDTVIDSDG
RQERAKEKERKKDRHRKRRRNVARRASSARKEGKELEDRPEREERRGRKKRDKEGKGKWE
GGEDERQEEVKNDTVAKIQKNFSNENTRKLEQKEIEVVGEEDGDTEGKRKNGHSKKDEKK
EDNGRGEKVEKKQKKRRVETSSEHESTEEEEDEEEKEGEEKPEVLSPEELEKLKEEVDER
KKLISTLRGKPWAMRKKLLTLRESHEFVEKYEGALGKGKSRKLYAYKVMMLKKWMKFQRD
FENFKTACVPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGR
PYGSMPRKTVPRADEANAMDFAVLWDFGGYAQYSVLFYGYYNSQRAIGWLKFRMPLSYFL
VGVGTVAYSYMVVIRTMARNANEDGGGDNNNFNFSWKMFTSWDYLIGNPETADNKFASIT
TSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALEGLE
SHSWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRIALQWQLGRIFALFLGNLYTFII
ALMDEINLKREEEEVLKLNMTMWEASLYNGTLGANSTVPPITVHPADIPRGPCWETMVGQ
EFVRLIVSDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIF
NQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLV
ILFLSTLPAIYTIVTIPPSFDCGPFSGKSRMFDVIQETLESDFPAWFGKVFSYASNPGLV
LPFLLLMVLAIYYLQSTSKSYKQANLELKKKLQTQNEENKKKTKIAALKAAMDLEEAQNA
RSEAPRQQRNNNASQQSYREDREKKGEEHRAHQGKSDHQIPPSATSPPAPRGHRIPGPLP
GNQRQPAPSVQRVPNSQRH
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgccttatcatgccccccctccccgcctcccccctcctcttcctcactcccctcccagt
ttgggttgggtcagggtgggccgggatggggtggctgctttctccccctctgaggaacca
gcagtcagcattggcttggaggatgcagatgaagaggacacagttattgactctgatggg
aggcaggagagggcaaaagagaaggagagaaagaaagataggcacagaaagagaagaaga
aatgtagcaagaagagcttccagtgcaagaaaagaaggaaaggaattggaggacagacca
gaaagagaggagaggagaggacgaaaaaagagggataaggaggggaaagggaaatgggaa
gggggagaggatgagaggcaggaagaagtaaagaatgacacggttgctaaaattcaaaag
aatttcagcaatgaaaacaccagaaaactggagcaaaaagagatagaggttgtaggagag
gaggatggggataccgaggggaagaggaaaaatggacactcaaaaaaagatgagaaaaag
gaggacaatggaagaggagagaaagttgagaagaaacagaagaaaagaagggttgagaca
agttcagagcatgagtcaactgaggaagaggaggatgaggaagagaaagagggagaggag
aaaccagaggtcttgtctcccgaggagttggagaagctgaaggaggaagtggatgagagg
aagaaacttatctcaaccctaagaggaaagccttgggccatgaggaagaaactgctaact
ctacgggagtcccatgagtttgtggagaaatatgagggagctcttgggaaaggaaagagc
agaaaactgtacgcatataaagtcatgatgttgaagaaatggatgaagtttcagagggac
tttgaaaacttcaaaactgcttgcgttccatgggagatgaaaatcaaagagattgagagc
cattttggctcctcggttgcctcctacttcatattcctgaggtggatgtatggcatcaac
atgatcctctttgggctgacgtttggcctggtcatggtgccagaggctctgatgggcagg
ccgtatggtagcatgcccagaaagactgtccctagagctgacgaagccaacgccatggac
tttgctgtcctatgggactttgggggctacgcccagtattctgtcctcttttatggctac
tacaacagccagcgtgctattggctggctcaagttccgcatgcccctctcctacttcctg
gttggcgtgggaactgtggcctatagctatatggtggtgataaggactatggcccggaat
gctaatgaggacgggggcggagacaacaacaacttcaatttcagctggaagatgttcacc
agctgggattacctcatcggcaaccctgagacagccgacaacaagtttgcctccatcacc
accagctttaaggaggccattctggaggaacaggagagcaggaaggatgacaacatccac
ttgacccgttttctgcgggttctggccaacttcctggtgctgtgctgtctagcaggaagt
ggatatctcatctactttgtggtgcgtcgctcccagaagtttgctttagagggactggag
agccatagctggtgggagaggaatgaggtgaacatggtgatgtccctcctggggatgttc
tgtcccatgctgtttgacgtgatcagtgcactagagaactatcacccccgcattgctcta
cagtggcagctgggacgcatcttcgccctattcctggggaacctttacaccttcatcatc
gcactcatggatgagatcaacctcaaacgggaggaggaggaggtgctgaagcttaatatg
actatgtgggaggccagtctgtacaatgggaccttgggagcgaatagcacagttcctccc
atcaccgtccaccctgccgacatcccacgaggaccctgctgggaaaccatggtgggacag
gagtttgtccgactcattgtgtcggatactatgacaacctacatcacgctgctgatcggt
gacttcttgcgtgctgtgcttgtgcgtttcctcaactactgctggtgttgggacttggag
gctggatttccctcctactcagagttcgatgtcagtgggaatgtcctgggcctgatcttc
aaccaaggcatgatatggatgggtgcgttctatgccccctgcctgcctgctctgaacgtg
ctgagactgcatgtgtcaatgtacctgcagtgctgggccgtcatgtgctgtaatgttcct
caggagagggtgttcaaggcctcaggctccaacaacttctacatggccatgctactggtc
atcctcttcctctcaacgctgcccgccatctacaccatagtcactatccccccctccttc
gactgtggccccttcagtgggaaaagccgcatgtttgatgtgatccaggagacgctggaa
tctgatttccctgcctggtttgggaaggtgttcagctacgcctccaaccctggcctggtg
ctgcctttcctactgctgatggttttggccatttattacttgcagtctacatccaaaagc
tacaagcaagccaacctggagttaaagaagaaacttcaaacccaaaatgaagagaacaag
aagaagactaaaattgcagcactgaaagctgctatggatttagaggaggctcaaaacgct
cgttcagaagcaccgcggcaacagagaaacaacaacgcctctcagcaatcttatagggaa
gacagagaaaagaagggtgaggaacacagagcacatcaaggaaagagcgaccatcaaatt
cccccttctgccaccagccccccggccccgaggggccacagaatccctgggcccctacca
ggtaaccagcggcaaccagcacccagtgttcagagggtcccaaactcccagagacactga
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