Salvelinus sp. IW2-2015 (Arctic char): 111958113
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Entry
111958113 CDS
T05762
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03440
Homologous recombination
salp04068
FoxO signaling pathway
salp04110
Cell cycle
salp04115
p53 signaling pathway
salp04210
Apoptosis
salp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111958113 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
111958113 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111958113 (atm)
04210 Apoptosis
111958113 (atm)
04115 p53 signaling pathway
111958113 (atm)
04218 Cellular senescence
111958113 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111958113 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salp03032
]
111958113 (atm)
03036 Chromosome and associated proteins [BR:
salp03036
]
111958113 (atm)
03400 DNA repair and recombination proteins [BR:
salp03400
]
111958113 (atm)
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111958113 (atm)
Protein kinases [BR:
salp01001
]
Serine/threonine kinases: Other
PIKK family [OT]
111958113 (atm)
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111958113 (atm)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
111958113 (atm)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
Check point factors
Other check point factors
111958113 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
HEAT_ATR
TTI1
TPR_ATM
DUF3349
Motif
Other DBs
NCBI-GeneID:
111958113
NCBI-ProteinID:
XP_023835065
LinkDB
All DBs
Position
LG4p:complement(175214..227502)
Genome browser
AA seq
3089 aa
AA seq
DB search
MSLVLHELLVCCRGLENDKATERKKEADRFRQLIRSPDTVEELDRISGTRAAKSSKQLTW
NAVFRFLQKYLQKETELLQSGKANVSATTQANRQKKMQEISSLVKYFIRCANKRGPRLNC
GELLNHVMEILRSSFSCSAYGEDYSSILLKNILSVRKYWCEITQQQWHNLLDLYCGLFTG
SSKAINRVLVSRIIHTAVQGCCLQTEGFSHTLFSFFSRALLNARQERHLAVVEHLVSALN
VFLRSAAMNCRIRVCRLGEELLPSVLYVWTQMRPSTTLKEEIVEFFNLQLCVHHPKGSKT
QDTGAYAEDWVKWQSLLYNLYDALVSEISQIGSRGKYATGSRHIAVKENLMELTAEICHQ
LFSEDCNLQVLEVTQAHLRATQRGSPHGTPSKRRRIELGWEVLRDHLQPHHSDFDIIPWL
QITSVLTSKYPSMVPGQELVPLLSVLCQLLGEQRRGDRGPYVLRCLREVARCQATHPERA
QSYRVELGRLWGRVWALALRGVSSPQTEALSLALLSTILQGAFIPIDRELWKLFSGSACK
PSDAAALCLAQALLKCPVLKSLGTGWDHAGAVEGVGPPSLKENIMSWLLMNEQSEEAEES
SRPHPIVCRDFPHNLIPRILVPLTLKDTRAGIMFLLGAKGLESAVMQDQTQVEVKGALSE
IESMYLQFSFDEMPSNPMVKEMVSSAGTQLTVVPSLKHKLEQGLLSVADHLLNCYSPDSQ
TTPPECLVRCSSLLTGXLAGYVSTGLLTEEEACHSQLFLKAKALVQDFSEYISNVKVKMA
EDGTMTTLRSVMRLCTQCVNRGVKDSMSSVSCNLFMKIFPARLLTELAEICKLLLNSSCK
RGSVGIEEETTDEDWDMTRTQADQQEDIDLFDDGDEPQTSTSKGTHRQNVDPNDTQCGPD
AKSLLAEEHLAQQDLAILASLEFLSLCVSAEFIHGLSFKPVEVRRKLLLLLEQIDCTKPL
HLNMYLVLLKKLPAEDTSLAAEEFDSLLRPLADLCSLYRQDQEICAAVLLGLLPSIRSLG
RTQDQHNDMRHVQGALLQVVSGFCILGRTGKCTAIVKVALIHCLLALLEADPCCKWAVLT
LREEELPVSVILPSHLSDSHHHVRMLAAMTVERLFLEMTPDSLEKRKMLPLKCQQTAFEN
IYLKAQEGMRVQKNSSPEDLSDETFNRKATLLKSVSVVLCCSPVCEKQSLFALFQSYKEN
NIEEPLIKKVLGSVSRALGYRSVEAFVSSHLDYLVAEWLGQHGYTLESFPYTLLNHATLK
DFYSSSYQVLIPHLVFLDDFKQVKSISTHLGKDWKKLLANCFPKIMVNILPYFAVSGQDA
QVAQQREKAHRVYDLLKDSNCLGKPQIDSLIHSNLSDIVVELLMTLYEGAATEEGGRGDL
RRFIGELDPAPNPPYFSSYVIKATLDYLSSCHSANLKSLVAILSKTPISIQRILLAVCQK
AAETINAYERHRILLMYYLFVSLLLKEVKDGLGGAWAFVLRDIIYTLIHHINSRPAQLDE
VSSRSFSLCCDLLTSVCRTAVQFCDDAVESHLQVIVGTLTAQVTNQLAISQQVLSLLKFL
VVESQDKLKSAIQKLEPFPDRPEFRELRAVQHTLKYSXGKFTLRQEIAHFLSVASCDSLP
LTRLEGLKDLRRQLHNNKSQIRPLLRECLADPEESVLVLLVLNLLQLCKLAANHPGGRDI
LEAAGSCLGELGPVDFSTIALLHGKDQLNARAVSLFSPVEPQWLYIILNCINNALTHHCI
EVRQAAVQSLKDILATQAGADFWEIHKDNRDPMLAYLNPFRSTKKKVVGMSEEVSLVARE
RLESQDLWVPEAGGHKAWLKTLCMVLLDSGGVRSEALLLSRPLCLVKTDFCQRVLPLIIH
DILLGDSDGSWRKLLSTHIQDFFTSCSSRARASSRSTTPLPSDSAGESDISNQGPLDKAS
LRTMLSVINYLRQQQRPLESDSNLCGTVCHSNFWLELNYLEVARAAQSCSAHFTALLYSE
IYVDKIKTNMEENRRNPARASRRITFDESSQNFPIFSLTEESVKDTGISLQDLLIEVYRS
IGEPDSLYGCGGGKMTSALTRIRTYEHEAMWGKALTSYDLHSNLPDGTRQVGIVEGLQNI
GLSSILATYLRGLESEGVEWGAELRELRFQAAWRNMQWDCDLSERNEKLNPGFNESVFCS
LQALRDKEFSTFDQTLKYARGNEVEELCRGSLEAVSSLYPALRNLQRISELESIRQLFSK
PLTDVGLAEVCSHWQQHSQLLVDSDFTLVEPILALRSVAQETLISQERDPXKNKYLSTVL
TSHLMELCQLARAAGNTQLAERAVFQMKQHGGGGGRGSTASSWQLEEAQVFWAKGEQGLA
LGLLRQMIHTLEEQVNFNPALVPVFTECLRLCGNWLAETCLESPGVILEKYLERAVEVIE
GHAIGSDTKLQSQRTQAFLSLARFSDAQYQGIDNYMKSSEFENKQALLEKAKEEVDLMRE
RKVGTNRYTVKVQRELELDERALSNLQADRRRFLCKAVENYIHCLEQGEEHDTWVFRLAS
LWLENADVKIVNDMMKGGVNRIPSYKFLPLMYQLAARMGTKMSATVAEDVGFHGVLNELI
CLSCLEHPHHTLFIILALVNANKDESFSRSRLSKSTPRHSSQLDLERSEVAQRIMNKIRK
KRAQMIRGIEVLCDAYITLAYMDASRHKTEKKAILIPSDQPIMQIKNLDDVIIPTMEIKV
DPSGKYDNLVTIKSFKPHFHLAGGVNLPKIIDCVGSDGKSRRQLVKGQDDLRQDAVMQQV
FHMCSMLLQRNTETRKRKLNIRRYKVVPFSQRSGVLEWCSGTVPIGDFLIDPQKGAHTRF
CPQDWTSITCRKKMMESQRLGSDGKTQAFSEVCQNFRPVFRYFCMERFLDPAVWLEKRLA
YTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLS
RDIVDGMGITGVEGVFRRCCEKTMEVMRSSQESLLTIVEVLLYDPLFDWTMNPLKAFYLQ
QQHDEQAELQATLNSTLGGDILEAHRKSSSDSQSFNKVAERVLLRLQEKLKGVEDGRVLS
VGGQVNLLIQQAMDPNNLSRLFPGWQAWV
NT seq
9270 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtcctacacgagctcctggtctgctgcagaggtttagagaatgacaaagca
actgagagaaagaaagaggctgatcgcttcagacagctcatccggtctcctgacacagtg
gaggagctggatcgcatttctggaaccagagctgctaaaagttccaagcagctcacctgg
aatgcagtcttcaggtttttgcagaagtatctgcagaaagagactgagctgctccagtca
gggaaagccaacgtgtcagccaccacacaggctaaccgtcagaagaagatgcaggagatc
agcagcctggtcaaatacttcatccgctgtgccaacaagagagggcctcggctgaattgt
ggtgagctcctgaatcatgtgatggagattctgcggagctcattcagctgctcggcctat
ggggaggactacagcagcatcttgctcaagaacatcctgtctgtccgcaagtactggtgt
gagatcacccagcagcagtggcacaatttgctggatctatattgtggccttttcactggt
tcctccaaggccataaatcgtgtgcttgtgagcaggatcatccacactgcagtccagggc
tgctgtctgcagactgagggcttcagccatacactcttcagcttcttctccagagcactg
ctcaatgccaggcaggagagacacttggcagtggtggagcacttggtctctgctctgaac
gtcttcctgaggtctgctgccatgaactgccgtatcagggtgtgtcggctgggtgaggag
ctcctgccctctgtgctctatgtgtggacacagatgaggcccagcaccactctcaaagag
gagatagtagagttcttcaacctgcagctctgtgtacatcatcccaaaggatcaaagaca
caagacacaggagcctacgctgaggactgggtcaaatggcagagtctactctataacctg
tatgatgccctggtgagtgagatcagccagattgggagccgggggaaatatgccacaggg
tcgcgccacatcgctgtgaaggagaaccttatggagctaactgcagaaatctgccatcag
ctctttagcgaggattgtaacctccaggttctggaggtgactcaggcccacctcagagcc
acccagagaggcagtccacacggcacgcccagcaagcgtagacgcatcgagctgggctgg
gaggttctccgagaccacctgcagccacaccatagtgactttgacatcataccatggtta
cagatcacatcagtgttgacctctaagtacccctccatggtgcctggccaggagctggtt
cctctgctgtccgtcctgtgccagctgctgggggagcagcggcggggtgacagggggccc
tacgtgctgcgctgcctgagggaggtggctcgctgccaggccacacacccagagagggcc
caatcctacagggttgaactgggcaggctgtggggccgtgtctgggccctggctctacgg
ggggtcagctccccccaaactgaggccctcagtctggccctgctgtccaccatcctccag
ggagccttcattcccattgacagagagctctggaagctcttctctggctcggcctgcaag
ccctctgatgctgctgctctgtgtttggcccaggcccttctcaagtgtcctgttcttaag
agcctgggcactgggtgggaccatgcaggggctgtggagggggtcgggccacccagcctc
aaggagaacatcatgagctggctgctgatgaacgaacagagtgaagaggcagaggagagc
tcaagaccacaccccatcgtctgcagggattttcctcataacctaatccccagaatcctt
gtgcctttgaccctcaaagacacccgagctggcattatgtttctccttggagcaaaggga
cttgagagtgctgtgatgcaagatcaaacacaagtggaagttaaaggtgccctgagtgag
attgagagcatgtacctgcagttcagctttgacgagatgccctctaaccccatggtgaaa
gagatggtgtcctcagccggcacccagctcactgttgtccccagcctaaaacacaagctg
gagcagggcctcttgtctgtggctgaccacctactcaactgctactccccagattctcag
accacaccaccagaatgcctggttcgttgttcaagtcttcttactggcgrtttagcagga
tatgtctctactggtctcctgactgaggaagaagcctgccattcccaactcttcctaaag
gccaaggcactggttcaggattttagtgagtacatatctaatgtgaaggtgaagatggca
gaggatgggacaatgaccacactcaggtctgtcatgcggctgtgcacacagtgtgtcaac
agaggggttaaggacagtatgagctctgtctcttgcaacttgttcatgaagattttccct
gcgagacttttgactgaactggcagaaatatgcaaactgttgctgaacagctcctgtaag
agaggcagtgtggggattgaggaggagaccacagatgaggactgggacatgacgaggaca
caggctgaccagcaggaggacattgacctgtttgatgatggagacgaaccacagaccagc
acatctaaggggactcacagacagaatgtggaccccaatgacacccagtgtggtcctgat
gctaaaagcctactggctgaggagcatttggcccagcaggatttagccatcttggccagt
ctggagttcctgtccctgtgtgtatcggctgagtttatccacgggctctctttcaaacca
gtggaggtccgccgcaagttactactgctgctggagcagatagactgcaccaagccacta
cacctcaacatgtacctggtccttctgaagaaactacctgctgaggacacatcgctggca
gctgaagagtttgactcactcctcagacctctggcggatctttgctcattgtaccgccag
gaccaggagatctgtgctgcagtgctgctgggtctgctaccgtctatccgtagtctgggc
cgtactcaggaccagcataatgacatgagacacgtccagggagctctgctccaagtggtc
tctggattctgcattttgggcagaacggggaaatgcacagcaattgtaaaggtggcatta
attcactgtctactggctctactggaggctgacccttgctgtaagtgggcggtccttacc
ctgagggaggaggagcttccagtgtccgtcatcctcccgtcccacctgtccgactctcac
catcacgtacgaatgcttgcagccatgacagtggaaaggctgttcttggagatgacacca
gacagcttggagaagagaaagatgcttcctctgaaatgccagcagacagcctttgagaac
atctacctgaaagcccaagaagggatgagggtccagaagaacagctctcctgaagacctg
agtgacgagacctttaaccgcaaggccacgctgttgaagagtgtgtcggtggtgctgtgc
tgcagccccgtctgtgagaaacagtccctcttcgccctcttccagtcctacaaggagaac
aacatagaggagccgctcatcaaaaaggtcctgggcagtgtgtccagagctctgggctac
aggagtgtggaggcatttgtcagctctcacctggattacctggtggcagagtggctgggc
cagcatggctacactctggagtccttcccatacacgctgctcaaccacgccactctcaag
gacttctacagctcctcctatcaggtccttatcccacacctggtcttcctggatgacttt
aagcaggtgaagtccatcagcacccacctgggtaaggactggaagaagctgctggccaac
tgcttccctaagatcatggttaacatcctgccctactttgccgtgtcgggccaggatgcc
caagtggcccagcagagagagaaggcccacagggtctatgacctactcaaggacagcaac
tgcctgggcaaaccgcaaatcgacagcctgattcacagtaacctgtcagacattgtggtg
gagctgttgatgaccctgtatgaaggggctgctactgaggaggggggcagaggggacctg
agaaggttcataggggaactggacccagccccaaacccaccctatttcagctcctatgtc
ataaaagccacactggactatctcagctcgtgtcacagtgccaatctcaagtccctggtg
gccattttatccaagactccgatctccatccagaggatcctactggcggtgtgtcagaag
gcagctgagacgatcaatgcctacgagaggcaccgcatcctgctgatgtactacctgttt
gtcagcctgctgctcaaggaggtcaaggacggtctggggggagcctgggccttcgtcctc
cgagacataatttacacactcatccaccacatcaacagcaggcctgcccagttggacgag
gtgtccagccgtagtttctccctgtgttgtgacctactgacctctgtgtgtcgcacggcc
gtgcaattctgtgacgatgctgtggagagccacctccaggtcatcgttggtactctcact
gcccaggtgacaaaccaacttgctatctcacagcaggtgctcagtctgttgaagttcctg
gtcgtagagagtcaggacaagctgaagagtgccatccagaagttagagcccttcccagac
cgacctgagttcagagagctgagggccgtgcagcacacactgaagtacagcycagggaaa
ttcactctcagacaggagatagcccacttcctgtctgtggcttcctgtgactccctgcct
ctgaccagactggaggggctgaaggacctgaggagacagctccacaacaacaagagccag
atcagaccgctgctgagagagtgcctcgcggaccctgaagagagtgtgttggtgctgctg
gtccttaacctactacagctctgtaagctagcagccaatcaccctggaggaagagacatc
ttagaggctgcagggagctgtctgggagagctggggcctgtggatttctccaccatcgct
ctactccatgggaaggaccagctcaatgccagagctgtatcactcttctctccagtggaa
ccacagtggctctacatcatcctgaactgcatcaacaacgccctcacacaccactgtatt
gaggtgaggcaagctgctgtccagagtctgaaggacatcttggccacccaggctggagct
gacttctgggagatccataaagacaaccgtgaccccatgctggcttacctcaaccctttt
agatctaccaagaagaaggtggtcgggatgagtgaggaggtgagcttggtggctagggag
cggttggagagccaggacctgtgggtgcctgaggctggcggccataaggcctggttgaag
acgctctgcatggttctgctggacagtggaggggtcaggagtgaggctctgctgctttcc
cggcccctgtgtctggtgaaaacagacttctgccagagggtgctgccgctcatcatccat
gacattctgctgggggactctgacggctcctggaggaagctcctctccacacacatccag
gactttttcaccagctgttccagtcgtgcccgggcctccagccgctccaccactcctctc
ccctccgactctgcaggagagtcggacatctccaaccagggtccgttggataaggcctct
ctgcgcaccatgctctctgtcattaactatctgaggcagcaacaaagacctctagaatct
gatagtaacttgtgtggtacggtgtgccactctaacttctggttggagctgaactacctg
gaggtggccagggcggcccagtcctgctcagcccacttcacagccctgctctactctgag
atctacgtagacaagatcaagactaacatggaggagaaccgcagaaatccagccagagcg
tcgcgcagaatcacatttgatgagagcagtcagaacttccccatcttcagtctgacagag
gagagtgtgaaagacactggtatcagtctacaggacctactgattgaggtgtatcgtagt
attggggagccagacagtctgtatgggtgtggaggtgggaagatgaccagcgctctcacc
aggattcggacctatgagcatgaggcgatgtggggaaaggctctgacctcctacgacctc
cactccaatcttcctgatggcacacggcaagtgggcattgtggagggtctgcagaacatt
ggtctgagcagtatcctggccacctacctgcggggtctggagagtgagggggtggagtgg
ggggcggagctaagggagctcaggtttcaggccgcctggaggaacatgcagtgggactgt
gacctatcagagaggaatgagaaattgaaccctggcttcaacgagtcagtgttctgctcc
ctgcaggctttgagagacaaagagttttccacattcgatcaaactcttaaatatgccagg
ggcaatgaggtggaggaactgtgcagaggcagtctggaggcagtgtcctctctctaccct
gctctacggaacctccagaggatcagtgagctggagagcatccgacaactcttctccaag
cccctgaccgacgtaggcctggccgaggtgtgttcccattggcagcagcactcccagctg
ctggtggacagtgactttacgctggtggagcccatcctggccctgcgctccgtggcccag
gagaccctaatctcccaggagagagaccctgawaagaacaagtacctcagcactgtcctc
acctcccacctcatggagctctgccaactggcccgcgccgcaggaaacacacagctggca
gagcgggcagttttccagatgaagcagcatggcggaggaggggggcggggctccacagcg
tcgtcatggcagctggaggaggcccaggtgttttgggcgaagggagagcagggtcttgct
ctggggctactgagacagatgatccacactctggaggagcaggttaactttaaccctgcc
ctggtgccggtgttcacggagtgcctgaggctgtgtggaaactggctggcagagacgtgc
ctggagagccctggggtcatcctggagaagtacctggagagggcagtggaggtgatcgag
ggccatgcgataggttcagacaccaagctgcagagccagaggacgcaggccttcctgtcc
ctggccaggttctcagatgcccagtaccagggcattgataactacatgaagtcatctgag
tttgagaacaaacaggctctgctggagaaggccaaggaggaggtggacttgatgagggag
cgcaaggtcggcaccaacaggtacacagtgaaggtgcagagggagttggagctggatgag
agggctctgtccaacctgcaggctgacagaaggaggttcctgtgtaaggctgtggagaac
tacatccattgtctggagcagggtgaggagcacgacacctgggtgttccgcctggcctca
ctgtggctggagaacgctgacgtcaagatagtcaacgacatgatgaagggaggtgtgaac
aggatcccgtcctataagtttctgcctctcatgtaccagctggctgcccgcatggggacc
aaaatgtctgctacagtggcagaggatgtgggcttccatggtgttctcaatgagctgatc
tgcctgtcgtgtctggagcaccctcaccacaccctcttcatcatcctggctctggtcaac
gctaacaaggacgagagcttctcccgcagccgcctgtccaagagcaccccgcgccattcc
tcccaactggacctggagcggtctgaggtggcccagaggataatgaacaagatcaggaag
aagagagctcagatgatcagaggcatagaggtcctctgtgatgcctacatcactctggcc
tacatggacgccagtcgacacaagacagagaaaaaagccatcctcatcccctctgaccag
cccatcatgcagataaagaacctagatgatgtcatcattcctacaatggagatcaaggtg
gacccctcgggtaaatatgacaacctggtgaccatcaagtccttcaagcctcactttcac
ctggccggaggggtcaacctgcccaagatcattgactgtgtgggatcagacgggaagagc
agacgacaactggtcaagggccaggatgacctgcggcaggatgctgtgatgcagcaggtg
ttccacatgtgttctatgctgctgcagcgcaacactgagacacgcaagaggaaactcaac
atccgacgctacaaggtggtgcccttctcccagcgtagtggggttctagaatggtgctcg
gggaccgtccctataggggatttcctcatagacccacaaaagggcgctcacacacgcttc
tgcccccaagactggaccagcataacctgccggaaaaagatgatggagtctcagaggctt
ggttccgatgggaagacccaggctttcagtgaggtgtgtcagaacttccgccctgtcttc
cggtacttctgcatggagcgattcctggacccggcagtgtggctggaaaaacggctggcc
tacactcgcagtgtggccacttcctccatcgtgggctacattgttggactgggggatagg
cacattcagaacatccttatagacgaacagacagctgaactggtgcatattgatttgggt
gtagcgtttgaacagggcaagattctcccaactcctgagactgttcccttcaggctatcc
agagatattgtggatgggatgggcataacgggggtggagggcgttttcagaagatgctgt
gagaagaccatggaggtcatgaggagttcacaagagtccttgctgactattgtagaggta
ctgctgtacgaccctctgtttgactggaccatgaaccctctcaaggccttctacctgcag
cagcagcatgatgagcaggctgagctccaggccacgctcaactctacactggggggagac
atcctggaggcccaccgcaagtccagcagtgatagccagagctttaacaaggtggcggag
cgcgtgctgctgcggctgcaggagaagctgaagggggtggaggatggcagggtgctcagt
gtaggagggcaggtcaacctcctcatccagcaggccatggaccctaacaatctcagccgc
ctcttccccggctggcaggcctgggtctag
DBGET
integrated database retrieval system
