Salvelinus sp. IW2-2015 (Arctic char): 111958137
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Entry
111958137 CDS
T05762
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111958137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111958137
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
111958137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF4820
DnaT
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
111958137
NCBI-ProteinID:
XP_023990553
LinkDB
All DBs
Position
LG33:complement(13855252..13986746)
Genome browser
AA seq
2148 aa
AA seq
DB search
MSSHPQSVPQGRRAVDTRHLPNPASLPLQLARAHTDVGLVDYHPHSRDYSSHLAQPHRRR
PSLLSEFQPGNERGQEQHIRYEHIYLPDPNSLSEMEYAEMKRPRLDMGPESLMRHSAHRP
QLPLGGAEDMSKDRGSSMGKLEPISPVSPAQMDPDLDLVPARFSKEELIQNMDRVDREIT
MVEQQICKLRKKQVQPQLEEEAAKPQEPERSMISPPPSEAKHRSLVQIIYDENRKKAEEA
HWILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQR
YDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSSRVGQRGGG
LASSSARSEHEVSEIIDGISEQENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPM
KVYKDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAESVLFYYLTKKNENYK
NIVRRNYRRRGRSQHGQQQQQQLQVNRSSQEEKEEKEKEKEKEKEKEKEKEGERDEEKTE
GEDKEDVMKDDTSGEDGEDKEPTVAFKGRRTANSQGRRKGRVTRSMTSEVEETTTPPLSS
ELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKL
DEILQQHKMKSERERKARRKGKALQSEEASAPSAAEEEEMEGSGASGNEEEAPEDGEGGA
NNSSDTESLPSPRSSEDSKAKEEGGGRAKAGSKPGDKEASGSHMVQGGDEKPPGDGDKAI
KQEVKTEAGDCSKELPSESTDGDRKPTTAEAEESKSSSKSSKRDHEPKTGSHADSDSSAT
CSADEVEESENTEKNRMTSPNRPSLLNYAHDGVISSPLQKPMDLKQLKQRAATIPPIMPQ
IPEGGPRGGVGKAVLPPHALALYQQQITMAHGESSQEAKQQQHAGQPSKQHPYPAQGDRD
PHNISSPRVRPRSPSTSDKDELEGNERWLQTLLHGLHKSRAFSPHGDPKKQAVGPEDLRA
TTLGRPVMSPYPMSPRDMAKLSHDQHLLHYNSSFQQVGHSGPPGLQQDGVRLAAVRPLHM
PEPPPLISSNKPGGSITQGTPVQLHSPAHGMDHGKMPPAQMGLSWMDQRKVGPYPVVKQE
QLSPRCSSSQAENLSTQGAPHDANAGRGSMPAVQGGSITKGIPGTRVHQDSPISYRGGSI
TQGTPADVLYKGTITRLITEDNPSRAERERDEALSKGHVVYEGISGHILTYDRLPSQNPK
EDSRGQPGEILGLKRPYDVMEGGISRGLPMRDSLSAANCEGLMGRAMPHERDSPHPTHHI
RGSISQGIPRHMEPQDGYMRREPKQMKREGSPPRGPGQMADPMKGRDGMVPTVKEGGRSI
HLIPREELRQMPDGMMMAKAGKDGIIAQGAPMKQEQGGLRKGHDVRSIIASSPRSHYGMP
PHLEMRGPEQRGRYEEGPKGRPSAVVSTASSMARSSPLAMGGEQGGKAHHSPVGYEEHKG
GMRAPYTGPSHRGSPLSRESGQRQHEGSNKNQPQERKSTPTPREMSSGKSPLPGVAEQQA
QQQAQQQASLASYERLLQGLGADVYRGQIPLAFDPAALRQGIPIDPAYYLPRHLAPNPGY
PHPYPYLIRGFPDTAALENRQTLLNDYITSQQMHQWPAAAAMAAQRSDLLRGLSPRDQPL
QLPYSAAPRGSSGSPMDRITYIPGAFPSQPYTSSPISPVGPQHMSKQHGTPSSADRERER
DRERDRERERERDRERDREQERERERDRERQRDRDRERERERDRDREKGISHGNVEHAPI
WRPGTEHSSGGSVRPSSHSGYGHQHSPVSPRTQDSVQQRPSVLHNTGGKSLPVSDHNNPS
VLRSMPGSNRYPGYGYQQSMDSKEMGRDGGKSRGGLPKHTQDQHGPSISSSKSDPKLASP
NQGGYPSPYPQGSSASHHSGRPPHLLPPQSDNAAGRGESGTPSREKTQNKPMSVQEQELR
ALGKTTMTAANFINAIIMRQISCETGMPETGSLVANSASDVQQKMMPMEQHGPYRSPSEE
RLSPGQQSPLTKGSQRVVTLAQHISEVITKDYTRQTQQAQQQVPMQQSYHSNSVLDLTRP
PSAPQAPPASQEPSQGPRYTPEGAGGDRARDRYCPGFILYMAPLCIFL
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccacccccagtctgtgcctcagggccggagggctgtggacacccgccacctg
ccaaaccctgccagtctaccactgcaactggcacgggcacacacggatgtgggactggtg
gactatcaccctcactctcgggactacagctcccacctggctcagccccaccgccgcaga
ccctctctgctgtccgagttccagccagggaatgagagaggtcaggagcaacacatccgc
tatgagcacatatacctgcccgatcccaacagcctatcagagatggaatatgctgagatg
aagcgtcctcggctggacatggggccggagtctctcatgaggcactcggcccaccgccca
caacttcctctgggaggggcagaggacatgtcaaaggaccgtggcagctccatggggaag
ctggagcccatctcccccgtcagcccggcccagatggaccctgatctggacctggtgccc
gcccgcttctccaaggaggagctcatccagaacatggatcgtgtggaccgggagattaca
atggtggagcaacagatctgcaagctacgcaagaaacaggtacagccacagctggaggag
gaggcagcaaagccccaggagcctgagcggtccatgatctcccctccgcccagcgaggcc
aagcaccgtagcctggtgcagatcatctacgacgaaaacaggaaaaaggcagaggaagct
cactggattctggaaggactgggaccccgagtagaactgcctctgtacaaccagccctcc
gataccaagcagtaccatgagaacatcaaaataaaccaggcgatgaggaagaagctcatt
ctttacttcaagaggagaaatcatgctcgtaagcagtgggaacagaagttctgccagcgc
tatgaccagttgatggaggcctgggagaagaaggtggagcgcattgagaacaacccccgg
cgccgggccaaggagagcaaggtacgcgagtactacgagaaacagttccctgagatccgc
aagcagagggagctgcaggagcgcatgcagagtagccgggtggggcagcgtggaggggga
ttggcctcgtcttcagcccgcagtgaacacgaggtctctgagatcatcgacggcatatca
gagcaagagaacaccgagaagcaaatgcgtcagctggcggtcatccctcccatgctattt
gacgcagagcagcaacgtatcaagttcatcaacatgaacggcctgatggacgaccccatg
aaggtgtacaaggaccggcaggtcatgaacatgtggagcgagcaggagaaggacaccttc
cgtgagaagttcatccagcacccaaaaaactttggcctgattgcttctttcctggagaga
aagacagtggcagagagtgtcctcttctactacctgaccaaaaagaacgagaactacaag
aacattgtgcgcaggaactatcggcgccgtggcaggagccagcatggccagcagcagcaa
caacaactgcaggtgaaccgcagcagccaggaggagaaggaggagaaggagaaggagaag
gagaaagagaaagagaaagagaaagagaaggagggagagagggatgaggagaagactgag
ggggaagacaaggaggatgtaatgaaggacgacacctccggcgaggacggggaggacaaa
gagcccacggtggctttcaagggtcgacgcacggccaacagccagggtcgccgcaagggg
cgcgtcacccgctccatgaccagcgaggtggaggagaccaccactccaccgctcagcagc
gaactagccaatctggagatgaatgagagctctcgctggactgaggaggagatggaaacc
gccaaaaaaggtcttctccagtatggtaggaattggtcggccatcgccaagatggttggc
tccaaaactgtgtcacagtgcaagaacttctacttcaactacaagaaaaggcagaaactg
gatgagattctgcagcagcataaaatgaaatcggagagagagcgtaaggcgcgccgtaaa
ggcaaagctctacaaagtgaagaggccagcgccccgtctgctgccgaggaagaggagatg
gagggttccggggccagcggcaacgaagaggaagctcccgaggatggagaaggtggggct
aacaacagctcggacacagagagcctgccctctccgcgttcctctgaggacagcaaggct
aaagaggagggtggcggtagggccaaggctggctccaaacctggggacaaggaggcctca
ggctcccacatggtccagggaggagatgaaaagcccccaggagatggggacaaggccatc
aagcaggaggtgaagactgaagcaggggattgtagcaaggagctacccagtgaatccaca
gacggagacagaaagcccaccactgcagaggcagaggagagcaagagctcctccaagagc
tccaagagggaccacgagcccaagacgggctcccatgcagacagtgactctagcgccacc
tgcagcgctgacgaggtcgaggagtcggagaacaccgagaagaacaggatgacgtcccca
aaccggcccagccttctaaactatgctcatgatggggtcatctcctcccccctgcagaag
cccatggacctgaagcagctcaaacagagggctgcgaccatcccccctattatgccccag
atcccggagggtggcccgcggggtggggttggtaaggccgtgctgcccccccatgccctg
gctctctaccagcagcagatcaccatggcccacggagagtcctcccaggaggccaagcag
cagcagcatgcaggtcagcccagcaaacagcacccttacccagcgcagggagacagagac
ccccacaacatcagcagcccccgcgtccgcccacgcagcccctccaccagcgacaaggac
gagctggaaggcaacgagaggtggctgcagactctacttcacggattacataagtcccgg
gccttctctccacacggagaccctaagaagcaggcggtggggccagaggacctgagggcc
actaccctgggccggcctgtcatgtccccctacccaatgtcccctcgagacatggccaag
ctcagccacgatcaacacctgctccattataactcctctttccagcaggttggacactct
gggccccctggtctgcagcaggatggcgtcaggttggcagcggtgcgccccctccacatg
ccagagccaccccctctcatctcctccaacaagccaggggggtctatcacacagggaacc
ccagtgcagctgcatagcccggctcacgggatggaccatgggaagatgccccctgcacag
atgggtttgtcctggatggatcagaggaaagtgggtccctaccccgtggtgaagcaggag
cagctgtccccgcggtgctcgtcctcccaggcagagaacctgtccacgcagggggcgccc
cacgacgccaacgctggacgtgggtccatgccagcggtgcaggggggcagcatcacgaag
ggcatccctgggaccagagttcaccaggactcccccatctcctaccgaggaggctccatc
acccagggcaccccggctgacgttctgtacaaggggaccataacccgtctgatcacggaa
gacaatcccagcagggcagagagggagcgggacgaggccctgtccaaaggacacgtggtc
tatgagggcatcagcggacacatcctcacctatgaccgcctaccctctcagaaccctaaa
gaagacagccggggccagcctggggagatcttggggctgaagcgcccctatgatgtcatg
gagggagggatctccagggggctgcccatgagggactctctgtctgcagccaactgtgag
ggtctgatgggtagagccatgccccatgagagagacagcccacacccgacccaccacatc
cgtggttccatttcacagggtatcccccgtcacatggaaccccaggatggctacatgagg
cgagagcccaagcagatgaagagagagggctccccgccccgagggcctggccagatggct
gaccccatgaagggacgagacggcatggtgcccaccgtgaaggaggggggccgatccatc
cacctcatccccagagaggagctacgacagatgcccgatggcatgatgatggccaaggct
ggcaaagatggcatcatagcacagggtgctcctatgaagcaggagcagggtggcttaagg
aaggggcatgacgttcgttccatcatcgccagctccccacgctctcactacggcatgccc
cctcacctggagatgcgggggcctgagcagcggggccgctacgaggaaggtcctaagggt
cggcccagcgctgtggtcagcacggccagctccatggcccgctcctcgcctctggccatg
gggggcgaacagggtggcaaggcccaccacagccccgttggctacgaggaacacaagggt
ggcatgagggctccctacactgggccttctcacagaggatcccccctgtccagagaatca
ggccagcggcagcatgaaggctccaataagaatcagcctcaggagcgcaagtccacaccc
acccctagggagatgagctccggcaagtcaccgctgccgggcgttgccgagcagcaggcc
caacaacaggcccaacaacaggcgtccctggcgtcgtacgagcgtctgctgcagggtctg
ggggctgacgtgtaccgaggccagatccccctggcctttgaccctgctgccctgcgtcag
ggcatccccatcgacccagcgtactacctgcctcgccacctggcccctaaccctggctac
cctcacccctacccctacctgatccggggcttccccgacacggcggccctggagaaccgc
cagacgctgctcaacgactacatcacctcccagcagatgcaccagtggcctgcagccgcc
gccatggctgcccagcgctcagacctgctgagggggctctcaccacgggaccagcccctc
caactgccctactctgctgccccgcgcgggtcttccggctcccccatggaccgcatcacc
tacatccctggagccttccctagccagccatacacctcctctcccatctcaccagttggg
ccccaacacatgagcaagcagcacggcacaccgtcctctgctgaccgcgagcgggagaga
gaccgggagagagaccgcgagagggagagggagagagaccgcgagagggacagggaacag
gagagggagagagagagggatcgcgagagacaacgggacagagacagagaacgggagaga
gagcgggacagggacagagagaaggggatctctcacggcaacgtggaacatgcccccatc
tggagaccaggcacagagcacagctcaggtggtagtgtcaggccctcctcccactctggc
tatggccaccagcactccccggtgtcccctcgcacccaggacagtgtccagcagaggccc
agcgtcctgcacaacactgggggcaagagtctgcctgtcagcgaccacaacaacccctct
gtgctaaggtccatgccaggctcaaatcgctacccaggctacggctaccaacaaagcatg
gactctaaggaaatgggccgggatgggggcaagagtaggggaggccttcccaaacacacc
caagatcaacatgggccctctatatcctccagcaaatctgaccccaagctggccagccct
aaccaagggggttaccccagcccctacccccagggctcttcagcctctcaccactcaggg
cgaccccctcacctgctgcccccccagtcggataacgctgctggccgtggagaaagtggc
acacctagtagggaaaagactcaaaacaaaccgatgtccgttcaggaacaagagctccga
gcactcggtaagaccaccatgactgcggccaacttcataaacgcgattatcatgcgtcaa
atttcttgtgaaacggggatgccagagacgggctcgctcgtggccaacagcgccagtgat
gttcaacagaagatgatgcccatggagcagcacggtccgtaccgttctccctccgaggag
aggctgtccccaggccagcaatcccccctgacgaaaggcagccagagggtggtcaccctg
gcccagcacatcagtgaggtgatcaccaaggactacacccggcagacccagcaggcccag
cagcaggtccctatgcagcagtcttaccatagcaactctgtcctggacctgacccggccc
cccagcgccccccaggccccacctgcctcccaggagcccagccaggggcctcgctacact
ccagagggagccggaggggatcgtgcccgagacaggtactgcccaggttttatactgtat
atggcaccgctctgtatcttcctatga
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integrated database retrieval system
