Salvelinus sp. IW2-2015 (Arctic char): 111958264
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Entry
111958264 CDS
T05762
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111958264
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111958264
04090 CD molecules [BR:
salp04090
]
111958264
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Other
111958264
CD molecules [BR:
salp04090
]
Proteins
111958264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
Syndecan
PKD
DUF6773
DUF6377
Motif
Other DBs
NCBI-GeneID:
111958264
NCBI-ProteinID:
XP_023835273
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All DBs
Position
LG4p:complement(496254..556906)
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AA seq
560 aa
AA seq
DB search
MHFSSCLCALLVALVYQVSGMDTVIGLYGETIEVPCNNGAPKPKDLFMTKWKYDDGDLLT
QLKDQDASVIATDKYKDRVSMAENSSLLIAAATLKDEKTFTCMVVAGADISEYPVKLLIH
KAPTGVEITALATELEIGKPTQLGQCSTSDANPAASITWFKNKKPLVADGKGIIISSNVK
VDEVTGLTTTSSTLQYTAEKGDTAALFTCGALNTLSPPVSFTVTYPTERISLHVLSKGPL
MEGAKVTLKCKADGNPPPTSFNFHIQGKVVKVENSDSYTVTDVTRESTGEYKCSIIDNAK
MEDSKNITINYLDMSLSPSGKVMKSFGEGLALTLQTHASGELKVSWTKDNGKLDSSPTFD
KLTYSDSGKYEVVVTMGALIKKASFELVVEGVPVIRRVAKQRGEDGQHKVLTCEAEGSPK
PTVAWSVNGTSADESPYVNGKITHKLTIVPTVNLTVVCTVSNELGQDTRTINVSTLFEEV
RMDKQDSSDEGDTTKLVVGVIVGLLLATVVVGLAYWLYMKKSKQGSWKTGEKEDGSTEES
KKLEEKIEEKLEENSQKVEV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttccagctgtctgtgtgccctcctcgtcgctcttgtctaccaagtgagcggt
atggatacagttatcggcctgtatggagagaccattgaggtgccatgcaacaatggagcc
cccaaaccaaaggacctgttcatgaccaaatggaaatacgacgatggagacctgctgacc
cagcttaaagaccaggacgcctccgtcatagccactgacaagtacaaggaccgtgtcagc
atggccgaaaactccagcctgctgattgctgcagcaacactgaaggacgagaagactttt
acttgcatggtggtggctggggctgacatctcagaatacccagtcaaactccttatccac
aaggctccaaccggagtggagatcacagccctagccacggagttggagattggcaaacca
acccagctagggcaatgcagcacctctgatgccaacccagctgccagcatcacatggttc
aagaacaagaaacctctggtggctgatgggaaaggcattataatcagttccaacgtaaag
gtggacgaagtcactggcctcaccaccacctcctccactctgcagtacacagctgagaag
ggagacacagcagctctgttcacctgcggggcgttgaataccttgtcccctccagtctcc
ttcactgtcacctaccccacagagaggatcagtctgcatgtcctttcgaaagggccccta
atggaaggagccaargtgactctgaagtgcaaggccgacgggaacccacctcccaccagc
ttcaacttccacattcagggaaaggtggtgaaggtggagaactctgactcctatactgtg
actgatgtcacacgtgaaagcacaggggaatacaagtgttctatcattgacaatgccaag
atggaagactccaagaacattaccatcaattacttggatatgagtttgagcccctcaggg
aaggtgatgaagagctttggcgaaggcttggctctgaccctgcagacccatgcatctgga
gaacttaaggtgtcttggactaaggacaatggcaagctggacagtagtcccacatttgac
aagctgacctactctgattctggaaagtatgaggttgtggtcaccatgggtgctctcatc
aagaaagcctcttttgagctggtcgttgaaggtgttccagtcattcggcgggtggccaag
cagcgcggcgaggacggccagcataaggtacttacctgcgaggctgagggctcccccaaa
cccactgtggcctggagcgtcaacggtacctcggctgatgagagtccctatgtcaatgga
aagatcacacacaagctgaccattgtgcctacagtcaacctgaccgttgtctgcactgtg
tccaatgagcttggccaggacaccaggactattaatgtgtcgaccttatttgaggaggtg
agaatggataaacaagactcatcagatgagggtgacacgacaaagttggtggtgggagtt
attgtgggtctgctcctggccactgtagttgtgggtctagcatactggctgtacatgaag
aaatccaagcaaggcagctggaagactggtgagaaggaggatggatccactgaggagagc
aagaaactggaggagaaaatagaagagaagctggaggagaacagccagaaagttgaggtg
taa
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