Salvelinus sp. IW2-2015 (Arctic char): 111958282
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Entry
111958282 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: coronin-2A-like
KO
K13887
coronin-2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111958282
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111958282
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF12
Pep3_Vps18
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
111958282
NCBI-ProteinID:
XP_023835281
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Position
LG34:complement(472115..493940)
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AA seq
379 aa
AA seq
DB search
MTWRPQYRSSKFRHVFGKAATKENCYDGVPITRSVHDNHFCAVNPRFIAVITECAGGGAF
LVISVHHTGKVDPLHPKVSGHRGNVLDIKWNPFNDFCIASCSEDSTVKVWDIPPHGVLKN
LTVPWKELQGHSRRVGLIEWHPTANNVLFSTGYDYQVMIWNLDSPEAVIKNPVRTISHHT
DVVLSMSFNTDGSRLATSCKDKKIRVLESRTGNLLQEANCKNHKASKVLFLGNLNMLLST
GSSRWNHRQMGSWDQEDLDVPLLQEDLDGSSGWLFPFYDPETHMLYIAGKGDGNIRYYEI
SSEKPYMHFLTEYRSHTPQKGMGIMPKRGLDVSSCEVFRFYKLVTIKALIEPLSMIVPRR
VRTPDTPTQTTRTPRVTIY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgacatggcgtcctcagtatcgcagctccaagttccgccacgtgttcggtaaggccgcc
accaaggagaactgctacgatggcgtgcccatcacgcggagcgtccacgacaaccacttc
tgcgccgtcaacccgcgtttcattgccgtcatcacagagtgcgccgggggtggagccttc
ctggtcatctctgtccatcacacagggaaggtggacccccttcaccccaaagtgtcaggc
cacagaggtaacgtactggacatcaaatggaaccccttcaacgacttctgcatagcatcc
tgctcagaggactccacggtgaaggtgtgggacatccctccccatggtgtgctgaagaac
ctgacggtgccgtggaaggagctgcagggtcacagccgcagggtgggcctcatcgagtgg
caccctactgccaacaatgtgctcttcagcactggctatgactaccaggtgatgatctgg
aacctggacagccctgaggcggtgataaagaacccggtgcggaccatcagccaccacact
gacgtggtgctctccatgtccttcaatacagatggcagcaggctggccacstcctgcaag
gacaagaagatcagagttctagagtcacgcactgggaacctgctacaggaggccaactgt
aagaaccacaaagccagcaaggtgctgttcctggggaacctcaatatgctgctgtccacc
ggcagctcccgctggaaccacagacagatgggctcttgggaccaggaggacctagatgtg
cctttgttacaggaggacctagatggttcgtctgggtggctctttcctttctacgatcca
gaaacacacatgctctacatagcagggaagggtgatggtaatatccggtactatgagatc
agctcagagaagccctacatgcacttcctcacagagtaccgctcgcacactcctcagaaa
ggaatgggtatcatgccaaagagaggcctggacgtgagctcctgtgaggtgttcaggttc
tacaaactggtgacgatcaaggccctcatcgaacccctctccatgatcgtacctcgcagg
gtaagaacccctgacacaccaacacagacgaccagaacacctagggtcacaatctactga
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