Salvelinus sp. IW2-2015 (Arctic char): 111958358
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Entry
111958358 CDS
T05762
Name
(RefSeq) polycomb complex protein BMI-1-A isoform X1
KO
K11459
polycomb group RING finger protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111958358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111958358
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
111958358
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-P11
zf-RING_10
Prok-RING_4
zf-Nse
zf-C3HC4_4
TBX2-3_TAD
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
111958358
NCBI-ProteinID:
XP_023835359
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All DBs
Position
LG34:complement(4947906..4957604)
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AA seq
351 aa
AA seq
DB search
MHTETTQATENMFIQTNASLPSMTMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLH
SFCKMCIVRYLETSKYCPICDVPVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRD
FYAAHPSVDATTRSNEDRGEVADEDKRIITDDEIISLSIEFFDHNKAKKTSVAEDKQSKE
QVNNKRYLQCPAAMTIMHLRKFLRSKMDIPCTYQVEVMYEDEPLKDYYTLMDVAYIYTWR
RNGPLPLKYGVRLSCKKMKMSHPQQEGQNSTGRSAESDSASDKACSPAGVPSTSSSLPSP
GTPVQSPHIPHISKPVNGASTSAPAPTRPFPFGNKPRKASLNGSSLSSGLA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggaaacgacacaagcaacggaaaacatgtttatccaaactaatgcgtctctt
ccttccatgacgatgcatcgaacgaccagaattaagataactgagctgaacccccacctc
atgtgtgtgctgtgcggtggatactttatcgatgccaccacaattatagaatgtcttcat
tcattctgcaagatgtgcattgtacgctatctggagaccagcaagtattgcccgatctgt
gatgtgccagtgcacaaaaccaaacctctgctcaatataaggtctgacaaaaccctacaa
gacattgtctacaagctggtccctggtctcttcaaaaatgagatgaagagaaggagagac
ttttacgcagcacacccttctgtagatgcgacgacaaggtctaatgaggatcgaggggag
gtggcggacgaggacaagagaatcatcacagacgatgagatcatcagcctgtccattgag
ttcttcgaccacaacaaggctaaaaagaccagcgtggctgaggacaaacagtctaaagaa
caggtcaataataagaggtatctgcagtgtcctgcagccatgaccatcatgcacctgaga
aagttcctccgcagtaagatggacattccttgtacctatcaggttgaagtgatgtatgaa
gacgagccactgaaagattactacacattaatggacgtagcctacatctacacctggaga
aggaatggccctttgccgttgaagtacggcgtcagactgagctgtaagaagatgaagatg
agtcatccgcagcaggagggccagaacagcaccggtcgytccgctgagagcgactctgcc
agcgacaaagcctgcagccctgccggcgtcccctccacctcctcctccttgcccagccct
ggtaccccggtgcagtccccacacatcccccacatctccaaacccgtcaacggcgcctcc
acctcggcccctgcccctaccagaccattccccttcggaaacaaaccgcggaaggcctcg
ctgaacggttcttctttgtcctcgggactggcctga
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