Salvelinus sp. IW2-2015 (Arctic char): 111958510
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Entry
111958510 CDS
T05762
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111958510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111958510
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111958510
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Gene cluster
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Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
111958510
NCBI-ProteinID:
XP_023835534
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Position
LG34:complement(5370195..5406928)
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AA seq
351 aa
AA seq
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MSKSSRCSVSENPAVFGTHTSVLPXTGTETRDKEGDMPLDIVLNGPAPWGFRLTGGKDFN
QPLTISRITPGSKAAVANLCPGDVILAIEGIPAEDMMHCEAQNKIKDAIYQLILTVQRPE
TRLWSPQVTEDGKANPFKINLEAEQQEFKPIGTGHNRKAQPFIAAANIDDHRQVVSTAYN
TPIGLYSSGNIQDAMHGQMRGLVQDKPEGSKTLTSIEESDVYRMLLKDQEEPQEPRQSGS
FKALQDFVDSDGTRPMVTRTVRAPMTKPPPPTGNLQKLPLCDKCGNGIVGTVVKARDKFR
HPSCFVCTDCDVNLKQKGYFFVEGQLYCETHARARTRPPEGHDLVTAFPSA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtcgtcccgctgctctgtttctgagaacccggctgtgtttgggacacacacc
agtgtacttccagytacaggaacagagacaagggacaaagagggggacatgccactggac
attgtcctaaatggcccggccccgtgggggttccgactgaccggcggcaaggacttcaac
cagcccctcaccatctccaggatcactccgggcagtaaggcggcggtggccaacctgtgt
cctggtgatgtcatcctggccatcgagggcatcccggcggaggacatgatgcactgtgag
gcccagaacaagatcaaagacgccatctaccagctcatcctcaccgtccagagaccagaa
accaggctatggtcgcctcaagtcacggaagacgggaaagccaacccgttcaaaatcaac
ttggaggctgagcagcaggagttcaaacccattggtacaggtcacaaccgcaaggcccag
ccctttatagctgcagctaacatcgacgaccatcgtcaggtggtgagcacagcctacaac
acccccataggcctctactcctcaggcaacatccaggacgccatgcacggacagatgagg
ggcctggtccaggacaagccagagggtagcaagacgctgacctccatcgaggagtctgat
gtgtaccgcatgctcctgaaagaccaggaggagccccaggagccccggcaatcaggttcc
ttcaaggccctgcaggactttgtcgacagtgacggcactcgccccatggtgacgaggaca
gtgcgagcgccaatgactaagccaccaccgcccacaggaaacctgcagaaactgcccctg
tgtgacaagtgtggaaacggcattgtgggcacagtggtgaaagcgagagacaagttccgc
caccctagctgcttcgtgtgcaccgactgtgacgtcaaccttaaacagaagggctacttc
ttcgtggagggccaactgtactgcgagacccacgctcgagcccggacaagacccccggag
ggccatgaccttgtcactgctttcccctcggcatag
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