Salvelinus sp. IW2-2015 (Arctic char): 111958664
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Entry
111958664 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein cleavage-activating protein-like
KO
K26682
sterol regulatory element-binding protein cleavage-activating protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111958664
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
111958664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_SCAP
SCAP_N
Sterol-sensing
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Patched
Beta-prop_DCAF12
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
111958664
NCBI-ProteinID:
XP_023835686
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All DBs
Position
LG35:7340255..7369273
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AA seq
1249 aa
AA seq
DB search
MAMDCIGSSDAFKLGILGSIVRRSLDAPRRSVLAHPRTAPPDGRQLTPPHRMTVRERLRE
KISAAFYRHGLLCASYPVPIILFTSASILACCYPLLRLPLPGTGPVEFTTRVRDYTVPSH
EPQGDLGERPDWYRGPPVAYIQPVLVKAAVSPWDSTLVPVDVFRSPLGRVFSLLEEIRNH
VHDDGSGVRSLEALCLQVTDLLPGLRRMQRVLPEHGCLLVSPGNYWQNQRELFDSDPDLL
KTVHQHEPKGLHTSATLRVVGRQPNRYISILPVIPITLHLSPREAIETRHPQDTRHPPPP
SLKTNDLPADLTLYKSVVTVLSSLLMSVGLCTLFGLTPTLNGGEIFPYLVVVIGLENVLV
LTKSVVSTPVDLEVKLRIAQGKSVNESWSIMKNMXTVCFQEFCLFAVVGLVSDFFLQMFF
FTTVLSIDIRRMELADLNRRLPAEAGMPLPKPGPLRPREAPPPPRPSPHTITLQTPAFRN
LRLPKRLRVVYFLARTRLAQRFIMVGTVIWIGILAYTDPAGLRTYLAAQVSEQSPLGEGG
AGGLPPHLGVAPVFPGPGGDPASTLSVLPAPAEPTPLPENQSQGHHRVPREGVPHQAPPL
VPQISWGAEDEEGWRKLSFRHWPSLFSYYNITLAKRYISILPVIPVTLHLSPREAIETRH
PQDTRHPPPPSLKTNDLPADLTLYKVAALGLAAGVLLVLLLFCLYRVLCSRNYGQNGVAH
GRRRHGDLPCDDYGYSPPISEISPLLLRGHSMDIECLASDGMLLASCCLAGQIRVWDTQT
GDCLTVIPKHGLRRSSSSGCWEQRDGWDAVGVAEPENLGGGTEPGGGVFDEDEGYPLRRR
TTPRPALFENQPDLTPLIDTNFDSQPPSHHLLTPPRDGFDFGGLVEKAYLEHELPSLGLT
ASYPSSSPLSGPPPQRRRSLGYIQPPAPQGQGTPDWESAVWAMELRGNLIAAGRSNGKLE
LWDAVEGSLRCSNEDGVSGITALAFLNNRXVAARLDGSLDFFTVDINKPLGLLQYRGPPG
RSNIPPSTCYSSEDVISCQLTRSVQCAHQKPITVLRAAAGRVVTGSQDHTVRVYRLEDSC
CLFTLQGHSGGITAIYIDQTMVLASGGQDGAICLWDVLTGSRVSHVYGHRGDVTSLVCTT
SCVISSGLDDLICIWDRSTGIKLYSIQQEVGXGASLGVISESLLVTGGQGCVSFWDLNFG
DLLQTVYLGQSSDGQGVRQLVVLNNAAIVCDFGSELSLVYVPXVLEKLD
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggactgtataggatccagtgatgccttcaaactggggattttaggaagcatc
gttaggaggtccctggatgccccgcggcgctccgtcctcgcccacccgcgcacggcgccc
cctgatggccggcagctgaccccgccccacaggatgacggtgagagagcggctgcgggag
aagatctccgcggcgttctaccgccacgggctgctgtgcgcctcctatccggtgcccatc
atcctcttcacctccgccagtatcctcgcctgctgttaccccctgctgcggctgcctctg
ccggggaccgggccggtggagttcaccacacgggtccgagattacaccgtcccttcccat
gagccccagggagacctcggcgagcggcctgactggtatcggggtcctccggtggcctac
atccagccggtcctggtgaaggcagccgtgtctccctgggacagtacgctggtccctgtg
gacgtgttccgctccccactgggccgcgtgttcagcctgctggaggagatccgcaaccat
gtacacgacgacggttctggggtcaggagcttggaggcgctctgcctgcaggtgacggac
ctgttgccggggttacggcgtatgcagagagtgctgccggagcacggttgtctgctggtc
tcccctggcaactactggcagaaccagcgggagctgtttgactctgaccccgacctgctg
aagaccgtccaccagcacgaacccaaaggactgcacacctctgccacactgagagtcgtg
gggcgtcagccgaacagatacatcagcatcctgcctgtcatccccatcacgcttcacctg
agcccccgggaggccatcgagacgcgtcacccccaggacacacgccaccccccgccgccc
agcctcaaaactaacgatctgcccgcagacctcacgctctacaagtcagtggtaacagtg
ctcagctctctgcttatgtctgtggggctctgcaccctgttcggcctgacgcccacactc
aatggaggtgagatcttcccctatctggtggtggtgatagggctggagaacgtcctggtt
ctcaccaagtctgtggtgtccacccctgttgacctggaggtcaaactacgcatcgctcag
ggtaagagtgttaatgagagctggtctatcatgaagaacatgnccacagtgtgtttccag
gagttctgtctgtttgctgtggtggggctggtgtctgacttcttccttcagatgtttttc
ttcaccacagttctttccattgacatccgacgcatggagttggccgatctgaaccggcgt
cttccggccgaggcggggatgccccttcccaaaccgggccccctgcgccctcgggaggcg
cctcctcccccacggccctcgccccacaccatcaccctgcagacgcccgccttcaggaac
ctgcgtctgcccaagaggctccgtgtggtctacttcctggcccgcacycgtctggcccag
cgcttcatcatggtgggtacagtgatctggatcggcatcctggcctacacggaccccgct
ggcctccgtacctacctggcagcccaggtgtctgaacagagccccctgggggagggcggg
gccgggggtctgcccccccacctgggagtagccccggtcttccctggaccaggaggggac
cccgccagcaccctcagtgtcctccctgcccccgctgaacccaccccgcttccagagaac
cagtcccagggccaccacagggtccccagggaaggagtaccccaccaggccccacccctg
gtgccccagatcagctggggggcggaggatgaggagggctggagaaagctgtctttcaga
cactggccctcgctcttcagctactataatattactctggcaaagagatacatcagcatc
ctgcctgtcattcccgtcacacttcacctgagcccccgggaggccatcgagacgcgtcac
ccccaggacacacgccaccccccgccgcccagcctcaaaactaacgacctgcccgcagac
ctcacgctctacaaggtagcagctctgggcctggcggcaggggttctgctggtgctgctg
ctcttctgtctctaccgggtcctctgttcacgcaactacggccagaacggcgtggcccac
ggacgccgtcgccacggtgacctgccctgcgacgactacggctactcgccacccatcagc
gagatctcccccctgctgctgcgtggacacagcatggatatagagtgtctggcgagtgat
ggcatgctgttggccagttgttgtctggcaggacagatccgtgtgtgggacactcagact
ggagactgcctcaccgtcattcctaaacatgggctgcggcggagtagcagcagtggctgc
tgggagcagcgggatggttgggatgccgtgggtgtggccgaacctgaaaatctggggggc
gggacagaaccagggggtggggttttcgacgaggacgagggctaccccctcaggcggcgg
accaccccacgtcctgccctctttgagaaccaacccgacctcacccccctcatcgacacc
aactttgactcccagcccccctcccaccacctcctcaccccgcccagggatggctttgac
ttcggggggctggtggagaaggcctacctggagcacgagcttccctcgctgggcctcact
gcctcctacccctcctcctcacccctgtcgggaccccctccccagaggagacgcagcctg
gggtacatccagcctcctgctccacagggccagggaaccccggactgggaaagcgccgtg
tgggccatggagctccgggggaacctcatcgctgctgggaggagcaacggcaaactggag
ctgtgggacgcagtggagggctcgttacgctgcagtaatgaagatggcgtctcagggatc
acggccctggccttcctcaacaacaggktrgtggcggccagactcgacggctctctagac
ttcttcactgtcgacatcaacaagcctctgggcttactgcagtacagaggtccccccggg
cgtagtaacataccgccctcgacctgctacagcagtgaggatgtgatctcatgccagctg
acgcgctcggtgcagtgtgcccaccagaaacccatcacggtgctgcgagccgctgccggc
agagtggtcacgggcagccaggaccacaccgtcagggtgtatcgtctggaggactcatgc
tgtctcttcacgctccagggacactctgggggaatcactgccatctacatagaccagacc
atggttctggccagtggggggcaggacggagcaatctgtctgtgggatgtgctgacgggc
agccgggtgagccacgtgtacggtcaccgtggcgatgtgacctcgctggtgtgcaccaca
tcgtgcgtgatcagcagcggcctcgacgacctcatctgcatctgggaccgcagcacgggc
atcaagctctactccatacagcaggaggtgggctgrggtgccagtctgggggtgatctct
gagtctctcctggtgacagggggccagggctgtgtgtccttctgggacctgaactttggg
gaccttctccagacggtctacctgggccagagcagcgacggccagggggtccgccagctc
gtggtgctgaacaacgccgccatcgtctgcgactttggctccgagctcagcctggtctac
gtacccmcggtgctggagaagctggactga
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