Salvelinus sp. IW2-2015 (Arctic char): 111958742
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Entry
111958742 CDS
T05762
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03030
DNA replication
salp03420
Nucleotide excision repair
salp03430
Mismatch repair
salp03440
Homologous recombination
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111958742
03420 Nucleotide excision repair
111958742
03430 Mismatch repair
111958742
03440 Homologous recombination
111958742
03460 Fanconi anemia pathway
111958742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salp03032
]
111958742
03400 DNA repair and recombination proteins [BR:
salp03400
]
111958742
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111958742
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111958742
MMR (mismatch excision repair)
111958742
DSBR (double strand breaks repair)
HR (homologous recombination)
111958742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Motif
Other DBs
NCBI-GeneID:
111958742
NCBI-ProteinID:
XP_023835760
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Position
LG35:16451452..16460672
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AA seq
278 aa
AA seq
DB search
MWNQGGSYGESNMGGGYTQSPGGFASPAASQGGEKKGRQRAQQIVPCTVSQLMSAAQAED
VFKVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVIPP
GTYVKVSGNLRSFQNHRSVVAFNVRPLQDMNEITSHMLEVVQAHMLLSKPQTIMMGGGGG
MNTSMVPMLRPGMGGNMGGGYSGANDMSTNGLSPSQNQVLSLIRSCPDAQGISTQDLKQS
LSGMSLAVIKQAVEFLSNEGHIFSTIDEDHFKSTDNDE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccaagggggatcatacggtgaatcaaacatgggtggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacagattgtcccctgcacagtgtcccagctcatgtctgctgcccaagcggaggat
gtcttcaaagtgggagaggtagaggttgcccaggttacaattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagtcgatgacatgacaggggcccctatg
gacgtgaagcagtgggtagatacagaggatcccagtgtggacagcactgtcatcccccca
ggcacttacgttaaggtctcgggcaatttgcgctccttccagaaccacaggtccgtggtg
gcgttcaacgtccggccccttcaggacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacacatgttgctcagcaaaccacagactattatgatgggcggaggaggggga
atgaacactagcatggtgcccatgttacggccgggaatgggtggcaacatgggaggtgga
tactcgggtgctaacgacatgtccactaacggcctgagcccaagccaaaaccaggtgctg
agcttgataaggagctgtccagacgcacagggtataagcacacaggacttgaagcagagt
ctcagcggcatgagcttggctgtcatcaagcaagcagtggagttcctcagcaacgaagga
cacatcttctccaccatcgacgaggaccacttcaagtctacggacaatgatgaataa
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