Salvelinus sp. IW2-2015 (Arctic char): 111958746
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Entry
111958746 CDS
T05762
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111958746
03029 Mitochondrial biogenesis [BR:
salp03029
]
111958746
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111958746
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
111958746
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Ank_KRIT1
Borrelia_P83
ANK_LRRK2
GrpE
FliJ
TFIIA
Motif
Other DBs
NCBI-GeneID:
111958746
NCBI-ProteinID:
XP_023835765
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Position
LG35:7405937..7411392
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AA seq
479 aa
AA seq
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MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGYSNIVELLVSQSGADINAKDMLKMTALHWAAQHGHREV
AELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGV
VNLSDLVNTTAKSGMGNWSTGYRESVSTTSVLATLAALAEASGPMGKNAGKSEDAIAADS
VDSAIQHVVGDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQ
EPYPSPARKRRIEPAAILTRPKDKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQE
AEQYRLRLEEAIEQQQSNNTSSIAGSTSTGVQEVEEEVVQMEKQRETEEIVVEEDKVEGE
EDVPFPEDTILVKVEEELDSGQGEQITVDDTEETEKASTKFTTTPKRGRGRGRGRGRRR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggtggacctggggaagcggctgctggaggctgcaagggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacttcc
ccgctccatctagctgctcagtacggacaccactccacggctgaggtgcttctccgagca
ggcgttagcagggatgcccggaccaaagtggacaggaccccactccacatggcggccacg
gagggctactccaatatagtggagctgctagtcagtcagagcggagcggacatcaacgct
aaggacatgctgaagatgacagccctgcattgggcggcccagcacggtcacagagaggtg
gcagagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagacg
ccctttgacatcgccatggacaccagcaatactgagctcatgatactgttacaggatggc
atgcagaaccaagtgaacatgaacccagagccccagttcatcatctcctctgctggggtc
gtgaacctctctgacctcgtcaacaccaccgccaagtcaggtatgggcaactggagcaca
ggttacagagaatctgtctctaccacctcagtcctggcaacactggcagcactggcagaa
gcctcaggtcccatgggtaaaaatgcaggcaaatctgaggacgcaatcgctgcagattct
gtggactcggccattcagcatgtagtgggcgatggaggtcagagggtcatcaccatagtg
acggaccaacacggcaacctgcagccagcgggtcttgggcagcagttctttgtcactatg
caggggcagcaaatggtggcagtcccggctggtcagatcacagaggaggtggtggaacag
gagccttacccctctcctgcacgcaagaggagaatagagcctgcagccatcctaaccaga
cccaaagacaagaaagcgaagtcaggggacagcagtcgggagcagctccagaagcagctg
caggaggccaatcggaaggcccaggagtaccgcacacagctcctacagaaggagcaggag
gctgagcagtaccgcctccgactagaggaggccatagagcaacaacagagcaacaatacc
agtagcattgctggttctaccagcacaggtgtccaggaggtagaagaggaggtggtccaa
atggaaaaacaacgcgagacagaggagatagttgtagaggaggacaaagtggaaggggag
gaggacgtcccatttccggaagacaccattctggttaaagtggaggaggagctggattca
gggcagggagaacagataacagtggatgataccgaggaaacggagaaggcttcaactaag
ttcacaacgacccccaaacgggggagagggaggggacgaggacgtggaaggaggcggtag
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