Salvelinus sp. IW2-2015 (Arctic char): 111958827
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Entry
111958827 CDS
T05762
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
111958827
NCBI-ProteinID:
XP_023835878
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Position
LG35:complement(7441847..7587349)
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AA seq
1106 aa
AA seq
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MRLVPGSPRPLPLLEVGLALALTALLPHLAMGVTPFPQDLEPISIVGREHSYLYPSFHGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAISLSAXSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTKAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINXRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESTWTPVPEEQVPKPRPGCCAGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTHLNASFSTQLLED
IDVYNPTKCNVRGEDRRVLGLELDREHHTLFVAFSSCVIRVPLSRCNDYGSCKESCLSSR
DPYCVWQRTGSCAMVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQSTLADSAYGKTT
PTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVSVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGXKTKRLAKDPEAPXPHALSLRS
LAKLNGLLXXQNKEDKMEVSSPKLYNSFFQNGKEHRQGAPRRNGGHHPGMTMGDLVHPHH
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGSRSSSGLLH
QQIYPYSHSFSNGQALANGHALVGGPQHLEERKIHNTERMLVQQPYPCYPQKVMEVTSLD
ELLKHIHEANSSKNTQVMTSSGLSASGGCHGGQLAFANRVQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQSYNGEQQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggaggtgggcctggctcta
gccctcacagccctcttacctcacctggccatgggagtcacacccttcccccaggacctg
gagccaatcagcattgtggggagagaacactcatacctgtacccaagcttccatggcctc
atgtcggacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctatcagtctcagcgccwcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaagatgtggataaatgcaca
gtgagggggaagaacagcgatgagtgctacaactacatcaaagttctggtcccacgcaac
gacgagacgctatttgcctgcgggaccaargcctttaaccccacctgccgcaactacaag
atgtccacactggaacaggatggtgaggaggtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctcttcgctggtggtgatttctactcggccaccatgaca
gacttcctggcyagtgatgcagtaatttaccgtagtctgggagagagcagcccggtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacgtcgttccttaaagcgcggctcaactgctcggtgccgggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatcwc
agaccagccgtgctgggggtcttcactacacaggccaacagtatcacaggctcggcagta
tgtgcattctacatggatgacattgagaaggccttcaatgggaagttcaaggagcagagg
aacagtgagtcaacctggacgcccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgtgccggcgacggctctgctgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccaccccctgatggacgaggcggttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tctgctgggccctataagaaccacacggtgctsttcctggggagcgaggacggcagggta
ctaaagatcctggccagcacccatctcaacgcctccttcagcacacagctactggaggac
atcgatgtctacaaccccaccaaatgtaacgtccgcggagaggacagacgggttctggga
ttggagctggacagggaacatcacaccctgtttgtggccttctccagctgtgtgatccga
gtacctctgagccgctgcaacgactacggctcctgcaaggagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggacggggagctgtgctatggtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagacagctgccacgac
gtcctggcgaccacacgcaagcaaagcactcttgctgattcagcatatgggaagaccaca
cccacaacaaccgccagcacaaccaatcaggtggccccattcccaaaggtggcaggtgac
tctgaaagaggtacaggtccagatggcggtcctccagtctcagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgattgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctygtctcctgctactgcaaccacaccggckacaag
acraagaggctggccaaggacccygaggcccccatrcctcacgccctgtccctwcgcagc
ctggccaagctcaatggcctgctggakwgccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcgtcaaggagcaccc
agacggaacggtggtcaccacccagggatgaccatgggagatctggtccacccccatcac
ctacaccactcttcggagctctcgggtctgcccaccccagattccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaggagcccaagtcccacaatatgggacaaggctccaggtccagctcaggcctgctccac
cagcagatctacccctactctcacagcttctccaatgggcaagctctggccaatgggcat
gccttggttggtggaccccagcacctagaggaacgcaagatccacaataccgagcgcatg
ttggtccagcagccttacccctgctacccgcagaaggtgatggaggtcacatcgctggac
gagctgctcaaacacatccacgaggccaactccagcaagaacacccaggtcatgacttca
tccggcctgtcagccagcggcgggtgccatgggggtcaactagcttttgccaaccgcgtc
cagccgcacatcccagagaccgagtcggcgccttactacagctcgtccaccctgccccga
gacagcctgacccgccgcatggacgtacctccggacatgccccctcaccaccagtccacc
ctggagcggaggcactcttcacagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccgacagcaaagcttcagccagcgtaacggc
caccagcaccaaccgccrcctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaacgggtacctgacgcgccagcagagctacaatggagag
caacaggaggataccggaggatacctccaccggggggccatagtccgccggaccacctcc
ctcaaacctgacgtccctcccaaacccctcttcatccccgcctcctctcccgttaaccaa
cagggaaacttcaactactga
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