Salvelinus sp. IW2-2015 (Arctic char): 111958846
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Entry
111958846 CDS
T05762
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111958846
Peptidases and inhibitors [BR:
salp01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
111958846
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
111958846
NCBI-ProteinID:
XP_023835915
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Position
LG35:complement(9793646..9810386)
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AA seq
1186 aa
AA seq
DB search
MGKGVALFLLLLALLHEAIGQKIRNGKYSVLRDGENDMTTCSMEVAFILDSSESAKTLLF
EKQKSFVLHFSTRLTMLQLSGWTLKLRMAALQYSSSVSIEHSFTAWQDLDVFHSRVSSMA
YIGHGTYSTYAITNATQLFTQETKEDSVRVAVLMTDGADHPRNPDVIGAAADAKGSGVKL
IAIGLSDLARQSQNSAKLRAIASTPAKQFVHSLTDPQLEEKLLKELDAIALEACPQAKVC
LCERGERGPSGNPGKKGDPGYEGPSGPKGSRGEPGVSGRPGSDGLEGSPGYNGDKGEIGD
CGTPGDKGDEGPGGPPGPRGPRGDQGVNGPPGDQGPEGQTGPKGDQGTTGASGPAGDIGI
GFPGPKGAKGIQGRPGTLGPIGIGEPGQPGPPGLAGAQGNQGAVGEGLAGPKGDRGYEGP
RGERGLTGVGVKGDKGNPGQLGSQGPVGMPGAGIQGEKGNQGPVGPPGPRGNPGVGLMGQ
KGSQGFSGEPGIPGEXGVGEPGPKGDPGSEGLPGIPGLSGEDGDIGQKGDIGLHGPRGPD
GAPGKGVPGEKGDRGERGSRGQLGAVGPVGQMGAKGEPGSAGRAGTNGPPGRGLPGIKGD
PGAVGPPGHVGEPGIGIIGPKGERGLPGPIGPPGLEGEGLPGTPGAPGVPGLTGEIGPEG
KGLPGPKGDRGTPGPTGLAGAPGVGLMGPKGSAGQIGAPGPQGLPGEGIQGPKGESGFQG
ITGPRGPPGQGIQGDKGDRGFVGERGRKGDGGETGETGAAGPLGRLGEKGEPGLTREEVI
KLVRSICGCGVKCRESPLELVFVIDSSESVGPDNFNVVKDFVNALVDRASVSRETTRVGV
VLYSHINMVVVSLHQQASRDQVKKTVRTMTYLGEGTFTGSAIHQANQVFRAARPGVRKVA
IVITDGQADERDSVRLEEAVKEANGSNIETFVIGVVNQSDPLYEEFKKELHLMASDPDRE
HVYLIDDFKTLPALESKLLSRICESDGGAQFSSIPSSRYSPGTPGQAGIVRETPERTDTD
TPTFNGDFKKTQMVPGPPGESDRVFIPQGPQTGDQDNSETNRVPSFDREPFKRLPEFLLP
SEMKNPSHSVVMTGSQAPTQRPLPVVKLPGLPPTSPPTSPPLPQDALIPDERCGQTLDPG
PCRNYFVKWYYDTTANACAQFWFGGCQGNQNRFESEKSCKKNCVKV
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggagtggctctgttccttctactgttggcacttcttcacgaggctataggc
cagaaaataagaaacggaaagtatagtgtcctcagagatggagaaaatgacatgacaaca
tgctccatggaggtggccttcattctggacagttcggagagcgccaagaccttgctgttc
gagaagcagaagtcctttgttctgcatttcagcactcgtctcaccatgctccagttgtct
ggatggaccctaaagctgcggatggctgctctccagtacagcagctccgtgtctatagag
cacagcttcactgcctggcaggacctggatgtgttccacagcagagtcagctccatggcc
tacattggccatggcacctactccacctacgccatcaccaacgccacacaactcttcacc
caggagaccaaggaggacagcgtcagggtggcggtgctcatgaccgacggtgccgatcat
ccgaggaaccctgatgtgatcggagcagcggcagatgctaagggtagtggtgtgaagctc
attgctatagggttgtcggacctggcccgccagagccagaacagtgccaaactccgggct
atcgccagcactccggccaagcaattcgtccacagtctcactgacccccagctagaggag
aagttactgaaagagttggatgcaatagcgcttgaggcgtgtccacaggctaaagtgtgt
ttgtgtgaaagaggggagagaggcccttctggaaacccaggtaaaaaaggagatccagga
tatgaaggaccatctggtccaaaaggatcacggggagaacctggagtcagtggccgacca
ggaagtgacggtcttgagggcagtcctggttataacggtgacaagggggagataggagac
tgtggcacccctggggataaaggagatgaaggccccggaggacctcctggcccacgggga
cccagaggagaccagggtgttaacggaccacccggggaccagggtccggagggccaaaca
ggacctaaaggggaccaaggaaccaccggtgcatctggaccagcaggggacattggcatt
gggttcccaggtccaaagggggccaaaggaattcagggaagaccaggaacccttggtccc
attggaattggagagccaggacagccaggacccccaggacttgctggagcacagggtaac
cagggagctgttggggaggggctcgctggcccaaagggggatcgaggctacgagggcccc
agaggtgagcgtggtctcactggtgttggggtcaaaggtgataagggaaatcctggacag
cttggatcacaaggaccggtgggaatgccaggggcaggaattcaaggagaaaaggggaac
caagggccagttggccctccaggccccagagggaatccaggtgtgggacttatgggccaa
aagggaagccaaggcttctcaggtgagcctggaatcccaggggagagkggtgtrggggag
ccaggacctaaaggagacccaggatcggaggggttgcctggtattccgggcctctctgga
gaggatggagacataggacagaagggtgacattgggttacatgggcccaggggacctgat
ggggcacccggaaaaggtgtccctggagaaaagggagaccgaggggagcggggctccagg
ggccagctaggggcagtagggcctgtggggcaaatgggggccaagggtgaacccggaagt
gctggacgagcaggtacaaacggaccacctgggcgggggttacccggtatcaagggggac
cctggtgcagtaggtccacccggacatgttggtgaaccaggaataggaatcattggaccg
aagggggagagagggctaccagggcccattggtccacctgggcttgaaggggaaggcctt
cctggaactccaggagcccctggagtaccaggactgacgggtgagattggaccagaagga
aaaggtttacctggtcctaagggagaccggggaactccaggccccacaggactagctgga
gcaccaggagttgggctaatgggccccaaggggtcagcgggtcagattggagcaccgggt
ccccagggactgcctggagagggcattcaaggaccaaagggggagtcaggattccagggg
atcacgggccccagggggcccccaggacagggtattcaaggggataagggagacaggggg
ttcgtgggtgaacgaggcagaaaaggggacggtggagagactggagagacaggagctgct
ggacctttgggcagactgggagaaaaaggggaacctggcctaacaagagaggaggtcatc
aaactggtcagatctatatgtggatgtggggtgaagtgccgtgagagcccactggagttg
gtctttgtgattgacagctcagagagtgtgggccctgacaacttcaacgtggttaaggac
tttgtgaacgctctggtcgaccgtgcctccgtgagccgggagaccactcgcgtcggggtg
gtcctctacagccacatcaacatggtggtggtcagtctgcaccagcaagccagccgggac
caggtgaagaagacggtccgcacaatgacctacctgggcgaaggcaccttcacgggcagc
gccatacatcaggccaatcaggtgttccgggcggccaggcccggggtgaggaaagtggcc
atagtgatcacagatggacaggcggacgagagggactctgtgaggctggaggaggcagtg
aaagaggccaatggcagtaacattgagacgtttgtcatcggggtggtgaaccagagtgat
ccgctgtacgaggagtttaagaaagagctccacctcatggcctctgacccagacagggaa
cacgtctacctgattgatgacttcaagacacttcctgcccttgagagcaagctgctgagt
cggatctgtgagagtgatggtggggcccagttcagctccatccccagctccagatactcc
cccggaacccctggacaagccgggattgtcagggaaaccccagagaggactgatacggac
acacccactttcaatggagactttaaaaaaacacagatggtgccaggtccaccaggagag
tcagacagagtctttatcccacagggcccccagaccggggaccaagataactcggagacc
aacagggtcccatcctttgacagggaacccttcaagcgcctaccagagttccttcttcct
tcagagatgaagaacccctcccacagtgtggtcatgacgggctcccaggcccccacccag
aggccccttcccgtagtaaagctacccgggctccccccaacctctcccccaacctctcca
cctctgccccaggatgctttaataccagatgagagatgtggacagactctggaccccggg
ccttgcaggaattactttgtgaagtggtactatgacactacggctaatgcctgtgcccag
ttctggttcggaggctgtcagggaaaccaaaaccgatttgagtcggagaagagctgcaaa
aaaaactgtgttaaggtctaa
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