Salvelinus sp. IW2-2015 (Arctic char): 111958879
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Entry
111958879 CDS
T05762
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04514
Cell adhesion molecules
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111958879
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111958879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111958879
04090 CD molecules [BR:
salp04090
]
111958879
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111958879
CD molecules [BR:
salp04090
]
Proteins
111958879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
ig
Ig_2
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
111958879
NCBI-ProteinID:
XP_023835976
LinkDB
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Position
LG4p:3098500..3167683
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AA seq
558 aa
AA seq
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MAKRLLLDYHKTLPLNGLQAATVLLLIYGFTCVSSNEVLVPERVSAVLGKNITLGCRVEV
DTNLSLTQSSWERRLPSGTITLAVFNPQFGISISPDYARRLSFMNPSVHDATIILEGVGF
QDIGSYTCKVATFPLGNTQASITVNILVEPKVYVSAGSMALVDGGNESVVATCIAERGRP
AAEVSWETELFGRSEVQTQDEPNGTYTTQVRYVLEPRRHSQGHTLTCVVRHPALQTEFRI
PYVLNVQFAPEVTVVGYDQNWFVGQENVKLDCGAKANPPAHHFSWTRLDGPMPDGVDIVN
NTFSFTRPLERNDSGLYRCEVYNDIGPRSHDIHVWIQDPPPTTAPVPTTSTLLFLDTSDT
SMAPNKRRGASGHFTSPTLASLSDSSLGTIVGGAVGGVLLLGLLLILGGACFMRKRRTFR
GDYYTKQYLGPSDMQKESQLDVLQPHELQEVYGDGHNSTCKDSQELKPKPGLGGDIIYPN
DIKDKEDWGDGHRGLREGSYYPVENHNNIHHPKGPLVHTPTVTNGSPYLPEDCYDNGTDS
EYVSHMDGSVISRREWYV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagattgctgctcgattaccacaagactctgccgctcaatggactgcaagcc
gccacagttttgcttctcatttatgggtttacctgtgtgagcagtaatgaggtgctggtc
ccagagagggtgagtgctgtgctggggaagaacattactctgggctgcagggtggaggtg
gacaccaacctcagcctcacccagagctcctgggagcgtcgcctgccctcaggcaccatc
accctggccgtcttcaacccccagtttggcatctccatctccccagactacgccaggcgc
ctgtccttcatgaacccctccgtgcacgatgccaccatcatcctggaaggcgtgggtttt
caggacattgggtcttacacgtgtaaagtggcgactttcccgttgggaaacacgcaggca
tccatcaccgtcaatatactcgtggagcccaaggtctatgtctctgccggttcaatggcc
ctggtggatggtggtaatgagtcggtggtggccacctgcatagcggagcgcggccggcct
gcagctgaggtgtcctgggagactgagctgtttggccgctctgaggtccagacgcaggac
gagcccaacggcacctataccacccaggtgcgctatgtgttggagccacggagacactcc
cagggccacaccctcacctgcgtggtgcgccacccggccctgcagactgagttcaggata
ccctacgtgctcaatgtgcagtttgctcctgaggtgacggtggtaggatatgatcagaac
tggtttgttggtcaggagaatgtgaagttggactgtggagccaaagcaaacccacctgcc
caccacttctcctggaccaggttggatgggccgatgcctgacggtgtggatatagtgaac
aacacttttagtttcactcgtcctctggagagaaatgactctggactgtacaggtgtgag
gtgtacaacgacatcggtccacgcagtcatgacattcacgtctggatacaagatcctccc
cccaccacggcaccagtccccaccacctctactctcctcttcctggacaccagtgacacc
agcatggcccccaacaagcggcgaggagcgagcggccacttcacctcacccaccctggcc
tccctgtcagacagcagcctgggtactatagtgggcggggctgtgggcggggtcctgctc
ctggggttgctgctgatcctgggcggagcttgcttcatgcgcaagcggaggaccttcagg
ggtgactactacaccaaacagtacctgggcccctccgacatgcagaaggagtcccagctg
gacgtgctccagccccacgagctgcaggaggtctacggggacgggcacaactctacctgc
aaggacagccaggagctgaaacccaagccgggactgggaggtgacataatttaccccaat
gacatcaaggacaaggaggactggggcgacggccacaggggcctccgggagggcagctac
taccctgttgaaaaccacaacaacatccaccaccccaaagggccgctcgttcacactccc
actgtgaccaacggctccccctacctgccggaggactgctatgacaacggcacagacagc
gagtatgtgtcccacatggatgggtctgtgatctcacgcagagagtggtatgtctga
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