Salvelinus sp. IW2-2015 (Arctic char): 111958929
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Entry
111958929 CDS
T05762
Symbol
itgae
Name
(RefSeq) integrin alpha-E
KO
K06524
integrin alpha E
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04518
Integrin signaling
salp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
111958929 (itgae)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111958929 (itgae)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111958929 (itgae)
04090 CD molecules [BR:
salp04090
]
111958929 (itgae)
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin alpha subunits
111958929 (itgae)
CD molecules [BR:
salp04090
]
Proteins
111958929 (itgae)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Voldacs
TM_ErbB1
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
111958929
NCBI-ProteinID:
XP_023836076
LinkDB
All DBs
Position
LG4p:3239677..3253630
Genome browser
AA seq
1104 aa
AA seq
DB search
MIREHILLTVICTVAGFNIFTKPVKYFPNDDKLFGQTTVQSKAGVLVTSPNSRPQKVFSC
GLEKCTEVNISANAGEGLRPIVAVTNSLTGSIERHMVCQQVRKKKNMNEDLNANCTLLSG
LLKHEVYYPATLVVDQLERNISINNNNNNNNNNNNNNSDEDDEKDDPGTEIAFVLDGSGS
IESEDFKRAKDFITTVMKHVWEKCFNCEFAVVQYGSKIRTELSLNEKDGPKAIETVKNIE
QIENATITASAIIYTIEHVFVPENGSKEDSKKIIIVVSDGAISHWDKKHLEKAKNLLERE
NITRFAIGVGTETKIDEMKIISNSESNLFLVGDYKALEGILSKLETSIIKGIEGIKQGDG
FQFQLAEAGFSNHIALDGSLLFGAVGANDWSGGVILKHPKENKVTFLNGSSSEPRFSYLG
YSVVSAMGPSGTLYISGAPRHSLTGGVFVFIATSHKLQEILLGDQVGSYFGSVLCALDFD
GDTKTDYLLVGAPYFHKRGEEGRVIIFKLNQAQGKFDKESWEWHGLDSYIYARFGSAISS
VGDLDGNGYNDVAVGAPLEEDEICGCSGSIYIYNGVQEGLQRDHSQRIKAAEFEMKLRHF
GQSVSAFSDKKSADGRRQLYISIGSQGTVTVLKTIPVIVFKPKLTMKPNTIPTSAQTNSK
TKMEHVTLAICFQAQRGNIGPGEELPISYNIDLDAGQNKKRLSFEDKANGEGIFIILYDT
NCLTPIKLFFTGCYDCFSPIEIKLNFKLNTTEPPLRILDFCTPTEFTEKIQFEKECEVKD
KCRENISLSDSRLSKNMVIIGTTQNLMIDFNLTNVGDSAYMTTLVLAYPNMLLFNKFTMK
MEGSVCENQVKENISYLKCRLLHPVFKKNTQVHFSISWQLVNKKSEMREAEITANLTCEN
GGTQVLDFKTYHFGIKNALKIQLTGEATPNIVKFTDQTIEKLDLTFKFQLHGENEHNATI
RVNITITVQARYATITIKSITPKGRCGNPEVKASGECLIRCSVTDVQEITVEAEASISKV
LGKSEKITAKATLGFDEDRFEALELRSMESVEVMIIKLAVEKSLPVIIGGSIGGFLFLAI
IIVVLVKCGFFKRRHQKDIAMDAE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgattcgagaacacattttgctgactgtgatatgcacagtagcaggcttcaacattttc
acaaaaccagtaaagtattttccgaacgatgataaactatttgggcaaactactgttcag
tccaaagctggggtattggttacatcaccaaattctagaccccagaaagtattcagttgt
ggtctggaaaaatgcacagaagtcaatatctcagccaatgcaggtgaaggactccgaccc
atcgtggcagtgaccaacagtttgactggatcgatagagcggcacatggtctgccaacag
gtcaggaagaagaagaacatgaatgaggatcttaatgcaaactgtacactcctgtctggc
cttctgaagcatgaggtgtattatcctgccacgttagttgtagatcaactggaaagaaac
atctccatcaataacaacaataacaacaacaacaataacaacaacaacaacagtgatgag
gatgatgagaaggatgatcctgggactgagattgcatttgtacttgatggatctggtagc
attgaaagcgaagactttaaaagggcaaaagatttcatcacaactgtgatgaaacatgtt
tgggagaaatgtttcaattgtgaatttgctgttgttcagtatggatcgaaaatcagaact
gaactgtcattgaatgagaaagatgggccaaaagctattgaaacggtcaaaaacattgaa
cagatcgaaaacgccacaataactgcttcagctattatctatacaattgaacatgttttt
gttcctgagaatgggtctaaagaggactccaagaaaatcattatagtggtgtcagatgga
gcaatatcccattgggataagaaacatttggaaaaagcaaagaatttgcttgaaagagaa
aatatcaccagatttgctattggggttggtactgaaaccaaaatagatgagatgaagatt
attagcaacagtgagagtaacctgttcttggttggtgactataaagccttggagggcatc
ctctccaagctagagaccagtatcatcaaaggaattgaaggaatcaagcagggggatggc
ttccaatttcaactcgccgaggctggattcagtaatcacattgcactagatgggtcctta
ctgttcggcgctgtgggggccaatgactggagtggaggagtgatcttaaaacaccccaag
gagaataaggtcaccttcttaaatgggtcatcctcagagccaaggttctcctacttaggt
tacagtgttgtgtctgccatgggcccctcagggactctgtatatctcaggggcccctcgt
cacagcctgactggtggggtctttgtctttattgcaacttcacacaaactgcaggaaata
ctactgggtgaccaggtgggatcttactttggctctgtgctatgtgccctggactttgac
ggggacactaagacagactacctgcttgtaggagcaccatacttccacaagagaggagag
gagggcagagtgatcatcttcaagctaaaccaggcccagggtaagtttgataaggagtcc
tgggagtggcatgggctggacagctacatatatgccagattcggttcggccatctcttct
gttggagacctggacggaaacggatacaatgacgtggcagttggagctcctctggaggaa
gatgagatatgtggctgttctggaagcatctatatctataacggagtccaagaaggactt
cagagggaccactctcagagaattaaagctgcagagtttgagatgaaactccgccacttt
ggccagtctgtgagtgcattctctgacaaaaaaagtgctgacgggaggagacagctttac
atcagtatcgggagccaaggcactgtcactgtcctgaaaacaatccctgtcatcgtgttt
aaacccaagctgaccatgaagcctaacaccatccccacatccgcrcagacaaactcaaaa
accaagatggagcacgtcaccctggccatctgcttccaagcacaaagaggaaatattggc
cctggtgaagaacttcccatatcttacaacatagatctggatgcagggcaaaacaaaaag
cgcctgtcttttgaggacaaagcaaatggggaaggcatcttcattatactttatgataca
aactgccttacccccatcaaactgttttttacgggttgctatgactgcttctcaccgata
gagatcaagctaaacttcaagttgaataccactgaaccacctctccgcattctggatttc
tgtactcccacagagttcacagaaaaaattcaatttgagaaggagtgtgaggtgaaagac
aaatgcagggaaaacatatccctatctgattcaaggctgagcaagaatatggtcataatc
ggaacgacccagaacttgatgattgactttaatctgaccaacgttggggatagtgcctac
atgacaacacttgttctggcatatcccaacatgctcctttttaacaagttcacaatgaaa
atggaagggtctgtttgtgagaaccaagttaaagagaatatttcttatttgaagtgtcgt
ctcttacatccagtcttcaagaaaaatacccaggtacatttctccatctcctggcagctt
gtgaacaagaaatcagagatgcgagaggctgagatcacagcaaacctaacatgtgagaat
ggtggcacccaggttttggattttaagacgtaccactttggaataaagaatgctttaaag
atccaactgactggggaggccacaccgaacattgtaaaattcacggaccaaaccattgag
aagttagacctgacatttaagtttcagcttcacggtgagaacgaacacaatgcaactata
cgcgttaacattacaataacagtacaggcacgttacgccacaattacaatcaagagtatt
acacctaaggggagatgtggaaatccagaagtaaaagcctccggggagtgtctcattcgg
tgttcagtgacagatgtacaggaaatcacggttgaggctgaggcttcaatcagcaaagtt
ttgggtaaatctgagaagattacagctaaagccactctgggatttgatgaagaccgattc
gaagcactggaattgagatcgatggaatcagtggaggtgatgattatcaaactggcagtg
gagaaatcattgcccgtcatcatcggaggctccattggaggctttctatttctagcgata
atcattgtcgtactcgttaagtgtggctttttcaaacgacgccatcaaaaggatatagca
atggatgctgagtga
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