Salvelinus sp. IW2-2015 (Arctic char): 111959090
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Entry
111959090 CDS
T05762
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
salp04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111959090
04020 Calcium signaling pathway
111959090
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111959090
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111959090
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111959090
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
111959090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
ig
LRR_8
TrkA_TMD
Ig_2
LRR_5
C2-set_2
Atypical_Card
CFC
Motif
Other DBs
NCBI-GeneID:
111959090
NCBI-ProteinID:
XP_023836289
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All DBs
Position
LG35:8783297..8809423
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AA seq
806 aa
AA seq
DB search
MAVVVGSAPWAAPLALVLLAITLAVPALGGCPSACRCSFAMLQCLEPNGIATIPALALQE
SENVTEIYIENQADLENITEVDLANYRELKNLTVTFCRLAYISANAFQHNIKLQYVNLAS
NSLEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQQWQLNDHSDLDNQPLHCLSNGHAR
RLDSLVMENCTVPDVAIVHANTKVQEGGNLTFVCQVTGVPMPVVRWRTNKLLSRYTVQER
FWGSTLELELQLWNMSSEDNLHNLTCEAENRAGPGEEKVTLDIEFPAKIIFLHNAEQQHH
WCFPFKVDGNPEPTIRWLFNGSNLTEGRYTYTQFIPDSDDGSVKHGCLFLNKPTHLNNGL
YTIIVENRLGVDQATATGKFMDNPFDPFDPEGIIPVLEESDPLPTNKSNEDVTENLESRV
FGVSVAVGLAVFACTFLLIMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFLNFGASP
PSSDDSGMSSFVENPQYFCGIFKDKDMCVQHIKRQDIVLKWELGEGAFGKVYLAECANLS
PDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQNIVRFYGVCTDGEPLAMVFEYMR
HGDLNRFLRAHGPDAHILEEVKMPPLGQLTLPQMLDIAAQIASGMVYLASLHFVHRDLAT
RNCLVGDMGEGLMVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDI
WSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHSLMQGCWQREPQQ
RLVIKDIHSRLLSLVKSPPIYLDILG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggttgtgggttccgctccatgggcagccccactggccctggttctacttgca
atcaccctggcagtgccagccctgggagggtgcccatccgcctgccggtgctccttcgcc
atgctgcagtgcctggagcccaatggcattgccactatacccgcgttggcactacaggag
agcgaaaacgtcacggaaatttacatcgaaaatcaagccgacctggagaacattacagaa
gtagaccttgccaactatagagagttgaagaatctcacggtcacgttctgcaggctggcg
tacatctcggctaatgctttccaacacaacatcaagctccaatatgtaaacctggcatct
aactccctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggtt
ttgagggacaacccccttgagtgctcctgtgatatccattggctgcagcaatggcagctt
aacgaccacagtgaccttgacaaccaaccgctacattgcctctccaatggccatgcccga
cggttggactccttagtgatggagaattgcactgtaccggatgtcgccattgtccatgcc
aacaccaaggtccaggaggggggcaacctgacatttgtgtgtcaggtgacaggagtgccc
atgcctgtagtgaggtggcgcactaataaactgctgtctcgctatactgtacaggagagg
ttctggggatccactttggagctggagctgcagctgtggaatatgtcctcagaagacaac
ctgcacaacttgacctgtgaggcagagaaccgggccgggcctggagaagagaaagtgacg
ttggacattgaatttccagccaaaatcatattcctgcacaacgccgagcaacagcaccac
tggtgtttcccctttaaggtggacgggaaccctgagccaaccatccgctggcttttcaac
ggctccaacctgaccgagggccgttacacctacacacagttcattcccgactcggacgac
ggctctgtgaagcacggttgtctatttctcaacaagcccacccacctgaacaacggcctc
tacaccatcattgtggagaacagactgggcgtggaccaagccacggccacgggaaagttc
atggacaacccctttgacccctttgatcctgagggcatcatcccagtccttgaagaaagt
gatccacttcccaccaacaaatctaatgaagatgtcactgagaacctggagagcagagtg
tttggggtgtcggtggcagtgggtctggctgtgtttgcttgcaccttcctcctcattatg
gtactggtcatcaacaagtgtggccagcagtccaagtttggtattcaccgttcatctgtc
ttgggaacagaggatgatcttgctgtgtcactgcgtttcctgaactttggggccagccct
ccttcctctgacgactctgggatgtccagctttgtggagaacccccagtacttctgtggc
attttcaaagacaaagacatgtgtgtgcagcacatcaaaagacaggacatagttctgaag
tgggaactgggtgagggggcgtttggcaaagtctacctggcagagtgtgccaacctcagt
ccggacagtgacaaaatgctggtggccatcaagactctgaaggatgccaacgagtcgacc
cggcaggacttccagagagaggctgagctgctcacagtgctccagcaccagaacattgtt
cgcttctatggagtatgtacagatggcgagccactggcgatggtgtttgaatacatgaga
catggagacctcaaccgcttcctcagagcgcacggtccagacgcccatatcctggaggag
gtgaagatgcccccgctgggccagctcactcttccccagatgctggacatcgccgcccag
atcgcttcgggcatggtctacctggcctcccttcactttgtgcaccgggacctggccaca
cgcaactgcctggtgggagatatgggagagggtctgatggtcaagataggagacttcggc
atgtcccgggacatctacagcacagactactacagggtgggtgggcgtacaatgcttcct
attcgctggatgcccccggaaagcatcatgtacaggaagttcaccacggagagtgatatc
tggagctttggagtggttctctgggagatcttcacctatgggaaacagccctggtaccag
ctctccaacagcgaggctatcgagtgcataacacagggccgggagctggagagaccacgc
acttgccccaaggaggtacacagcctgatgcagggctgctggcagagggagccccagcag
agactagtcatcaaggacatccacagccgcctcctgtccctggttaagagtccccctatc
tatctggacatcctggggtag
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