Salvelinus sp. IW2-2015 (Arctic char): 111959162
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Entry
111959162 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 8A-like
KO
K12876
RNA-binding protein 8A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
salp03015
mRNA surveillance pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111959162
09122 Translation
03013 Nucleocytoplasmic transport
111959162
03015 mRNA surveillance pathway
111959162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111959162
03041 Spliceosome [BR:
salp03041
]
111959162
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111959162
Spliceosome [BR:
salp03041
]
Complex C
Other components
EJC/TREX
111959162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
111959162
NCBI-ProteinID:
XP_023836403
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All DBs
Position
LG35:complement(8749896..8753540)
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AA seq
176 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQASSVKALNGQDMMGQPISVDWGFVRGPPKSKRRSGGRRRSRSPDRRRR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactagatcttcacgaagcgggaggcgaggattttgctatggatgaggat
ggtgatgacagcatccacaagttaaaggagaaggcaaagaggagaaagggaagaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatctgtggagggttggatccttttcgtgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgcggagtttggagagatcaag
aacctacatctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacgtacaaagaagcccaggcaagctctgtgaaggcgttgaatggccaggacatg
atgggccagcctatcagtgtggactggggcttcgtcagaggaccacccaagagcaagagg
aggagtggtggacgtagacgcagcaggagtccagacaggagacggcgttga
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