Salvelinus sp. IW2-2015 (Arctic char): 111959254
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Entry
111959254 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111959254
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
111959254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111959254
04090 CD molecules [BR:
salp04090
]
111959254
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Tumor necrosis fators
111959254
CD molecules [BR:
salp04090
]
Proteins
111959254
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
111959254
NCBI-ProteinID:
XP_023836502
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Position
LG36:complement(22236144..22239450)
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AA seq
238 aa
AA seq
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MASAGPNPEGGGPASGQESGGRRLSWLVLLLTLAAVTSSSLSALSLYHLLALRAEVEELR
SEVFRRREEQQEARHGETLQQMSSRARRSSPDPPHPPDPQPGLSFVRKRSVGTGTENSVS
QPCLQMLADSNRKTFQKEFALEPYTGIPWQAGLRRGSALEAESDSILVREEGYYFVYSQV
RASYYMDTTFAMVIVVIXKKRNVVGDEAQHVTLFRCIQNMNPVYPYNTFTQSESVLCV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgcaggtccaaatcccgagggtggtggacctgcttctgggcaggagtctgga
ggtcggaggctgtcctggctggtcctgctgctgactcttgcagcggtcacctcctcgtct
ctctctgctctgtctctgtaccacctgctggcccttagggccgaggttgaggagctccgg
tcagaggtcttccgcaggagagaggagcaacaagaggctaggcatggagagacactgcag
cagatgagcagcagagccagaaggagcagcccagaccctccacacccccctgacccccag
cctgggctgtctttcgtcaggaagaggagtgtgggcacaggaactgagaactcagtgtct
cagccttgtctacagatgctggcagatagcaacaggaaaacattccagaaagagtttgcg
ttggagccttacacagggatcccctggcaggcggggcttagaagaggctccgccctggag
gcagagagcgacagcatcctggtcagagaggagggatactactttgtctacagtcaggtg
agagctagttactacatggatacgacctttgccatggtcattgtggttatcnagaagaag
aggaacgtggtgggagatgaagctcagcatgtcacattgttccgctgtatccagaacatg
aaccctgtctacccatacaacacctttacacagagtgagtctgttctttgtgtgtga
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