Salvelinus sp. IW2-2015 (Arctic char): 111959378
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Entry
111959378 CDS
T05762
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111959378
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Protocadherins
111959378
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
111959378
NCBI-ProteinID:
XP_023836653
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Position
LG36:complement(14602694..14606860)
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AA seq
970 aa
AA seq
DB search
MGFCWIRGVGECVVLAVLFYSVQSTTTRYYTFEEDAPGTEIGNLSQDLKIDPAEDPGTSF
RFMQETNSSVIQMREIDGLLXVGETIDREXLCXRSPRCXVTFDIVAFSKEKFQLIHVEIE
XXDINDNSPXFLHXETTLEISENVQVDSRFPLDIAVDHDVGSNYIQRYHISPSSHFIVDV
RSREDGVKYAELVLVKAMDREAEDSYTIEVTATDGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPIGYQVLKVHAFDPDAGINGEVVYGFVEDTSSEAMRIFNVDRISGAV
TLKTLVDYEKQGSYELNIKASDLGTNSIPSTCKVVVDVVDVNDNAPEITIKPMTSTSDGV
AYITEAAAEESFVALISTSDSDSGSNGYVRSSLHGHDHFKLQQAYGDTFMIVTTTTLDRE
KTPEYNLTVVAEDLGTPPFKTVKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDMGKNAKVSYKLIDSDVVGEASILTYVSIDPVSGSLYSLRSFDFETVQQIELTI
QADDKGSPQLSSTSMIRIKVVDQNDNYPYFTFPVMLNDSAEVPLPVNAPLGYLALWVKGQ
DEDEGMNSELSFRIVQGDSNLFSINKDTGEIALKQGLASAIGNVLEIKIAVSDNGRSPLS
SSATIHFVVTDSQLSDDQVVIVLRSTDEEDAGLDVSVVVIIMLSGGCALLLIAIVIVVIT
CKLNQGGKDLDSKRDVSHVLFDSRHHPRLNSAEPNMYGGPRGFLNERTSSSLDESSLYEE
KNGDLESQMFLPPKPFLPTSMWQGEKYCLQMSGIDQQSVKDSGKGDSDFNDSDSDISGDG
GKRNLSTFQPWAKSSFHATNTLAVDCQGTYCVIPTQSFQAPLENAYTIGFSQAPVYNNPH
AYPHSWKDFGYSTSIPKARNTMQMFSHHTGTLPSYFAHQKRQSAAGLAEIQEHNQDITTV
ATISEVATIF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggattctgctggattcgaggagttggtgagtgcgtggtgcttgctgttctgttctac
tcggttcagtctacaactacgaggtactacacgtttgaagaggatgcgcccgggacagag
attggaaatctgtctcaggatttaaagatagacccagcagaggaccctggaacatctttc
cgcttcatgcaggagaccaattcgtctgtgattcaaatgagggagattgatggactttta
rymgttggggaaacrattgaccgrgagcakctstgccyraggtcyccgcggtgyyttgtc
accttcgacatagttgctttctccaaagaaaagtttcagctgattcacgtrgagatcgag
rtaarggacatyaaygayaaytcaccccasttyctccacaamgagacgacccttgarata
tccgagaatgttcaggtggactcacgattcccgttggacatcgctgttgaccatgatgtc
ggcagtaactacatccaacgttaccatatctctccctccagccatttcatagttgatgtg
cgcagcagggaggatggagtgaagtatgctgaacttgtgcttgtgaaagcaatggacaga
gaggctgaagattcctacacaattgaagtgacggcaacagatgggggagagccacccagg
tccggatcaatgactgttcatatcaaagtgctggattttaatgacaacagcccaacgttt
gagcacaactcactaaaggttgaactttatgaggattcacccataggttaccaagtgctg
aaagtgcatgcgtttgacccagatgctggcatcaatggcgaggtagtgtatggatttgta
gaagacacatcatctgaagcgatgcgcatttttaatgtagaccgaatttccggtgctgta
actttaaaaacattggttgattatgagaagcaggggtcttatgaattgaacattaaagca
tccgatttaggcacaaattctattccatcaacctgcaaagttgttgttgatgttgtagat
gtaaatgataacgcaccagaaatcactatcaagccaatgacctcgactagtgatggtgta
gcttacatcacggaggccgcagcggaggaaagttttgttgcgctgatcagcacctcggac
agtgactctggctcgaacggttacgtgcgcagcagcctacacggccacgatcatttcaag
ctgcaacaggcctacggggacacttttatgattgtaacaaccaccactttagatagagag
aagaccccagagtataacctcactgtagtcgctgaagacctcggaacaccacctttcaaa
acagtgaagcagtataccatcagagtgaccgacgagaacgacaacgcccccctcttcagt
aaatccatttatgaagtttctgtcctggaaaataatatccctgggtcatatataactact
gttgtagcacgtgaccttgatatgggtaaaaatgccaaagtatcatacaaactaattgat
tcagatgttgtgggtgaggcctccattttgacttatgtgtctatagacccagtgtcaggg
tcattgtatagtctgagatcttttgattttgaaaccgtccaacagattgaattaaccatc
caggctgatgacaagggctcacctcagctgtcaagcacatccatgatcagaatcaaagtg
gttgatcagaacgacaactatccctatttcacctttcctgttatgctgaatgattctgct
gaagttcctcttcctgtcaatgcaccactggggtacctggccctatgggtcaagggtcag
gatgaggatgagggcatgaatagtgagctcagcttcagaatcgtacaaggtgactctaac
ctattttcaatcaataaagacactggagaaatagctcttaaacaggggctggcctctgct
attggaaatgttttggaaatcaaaattgcagtgagtgacaatgggagatcccccctctcc
agcagtgccaccattcactttgttgtcacagattcgcagctctcagacgaccaagttgtc
attgtactacgttcaactgatgaggaagacgcaggcttggatgtttcagtagtagttatc
ataatgctcagtgggggttgtgctctgctgctgattgccatagtgattgttgttatcaca
tgcaagttgaatcaaggaggcaaggatctagactccaagagagacgtgtctcacgtcctg
tttgactccaggcatcatcccaggctcaactctgcagaacccaacatgtacggtggacca
agaggtttcctcaatgaaaggacctcttcatctcttgatgagtccagcctgtatgaggag
aaaaatggagacttggagtcacagatgttcctgcctcctaagcctttcctaccaacatct
atgtggcaaggggaaaaatactgcctgcaaatgagtggcattgaccagcagagcgtaaag
gacagtggcaagggagacagtgacttcaatgacagtgactctgacatcagtggggatggc
ggcaagaggaacctcagcaccttccagccctgggccaaaagttccttccacgccactaac
accctcgcggtggattgtcaaggcacttactgtgtaataccaacccaaagcttccaggcc
ccactagaaaatgcatacacaattggcttttcccaagcaccggtgtacaacaatccccat
gcctatccccactcctggaaagactttggctatagcaccagcattcccaaagcaagaaac
accatgcagatgttctctcatcacacaggtacactcccctcttacttcgcccatcaaaaa
aggcaatctgctgccggacttgctgaaattcaggagcacaaccaagatattactacagtg
gcaaccatatctgaagttgccaccattttttaa
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