Salvelinus sp. IW2-2015 (Arctic char): 111959446
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Entry
111959446 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111959446
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111959446
Enzymes [BR:
salp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111959446
Peptidases and inhibitors [BR:
salp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111959446
Ubiquitin system [BR:
salp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111959446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
111959446
NCBI-ProteinID:
XP_023836758
LinkDB
All DBs
Position
LG36:complement(18062561..18152922)
Genome browser
AA seq
2624 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTSSPNSTNENSPVSPPDEQGQGDAP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVF
YRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVRAGSRYSHVQEVQE
RLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGDEPDLDPDIN
KDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWR
VVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASYDTLRVLDGD
KDSINSARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHITLTVRFPNQG
RQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGDVVDPADDRKLIGQLNLK
DKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVESCLPGVIMSLHLR
YISFLWQVADLGCGINMPLLRDGARVLMKLMPPDNSTVEILRAVCLDHAKLGENSLSPTL
DSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPLVLSMLTRNNFL
PSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGTIPVSPINQATHDQAL
VLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQKIVWASGCG
TVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEIMTLCFSLLPTALDTLSKEKAW
QTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGHRPLXFFITLLFTVLGSTAKERAKHA
GDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHIG
ITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGEFPTEQAIPVC
SSPASINAGFELLVALAVGCVRNLKQMVDTLTDMYYLGCEALTEWEYLPPVGPRPTKGFV
GLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQENESNVDPRDEV
FNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYIPRGFWKQFRLWGEP
VNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESF
TTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQL
KRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVIQQNEPSEPEP
PGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGADGERNRWYKFDDGDVTECKMDDEEE
MKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVKYIQELTIS
SSSNNKPSHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFVKKLLTCNSVYLNPPPGQ
DHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRGPASDWYDALCVLLRHSKNVRYWFAH
NFLFAYANRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPVGASTQPQAC
DNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLSVPATFML
VALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVAARMQSSINGNPPLPNPYGDANQTTP
VMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVAY
SYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQC
IKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQ
SNETSNGYFLERSHSARMTLAKACELCPEECHLTKHGEAVSEEDAAMRKSSSPQQLLPGE
GTGQQHTEPDDQEAPEDQDTSPPDDISLYPHSSPGTTTQFQQQNNHPHGQPYTGPAAQHM
NNPQRPGPVPSSAPGPAPGTGPQAQDNWESTEEVPSVAPAPPKE
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccactcgtggctctcctgttggcggcaacgacaaccaggcaggccaggca
cccgacgctcagagtcagagccagcccccgctgccacagaaccagacgtcgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggacgccccc
ccccagctggaggaggaggagccggccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggttgttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctctctcaggactggttccccttgttggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgcccgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatttggctcgttaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
ccttttgggcagtgttacgagttcctcacattgcacacggtgaagaagtacttcctgccc
atcatcgagatggttcctcagtttctggagaacctgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctgtccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaggagaccgtgaagagcttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtaatctcaagtgtgtcctactacacacatcgacatggcaaccctgaggar
gaggagtggcttactgcagaacgcatggcggagtggatccagcagaaccacatcctgtcc
atcgtgctgagggacagtctgcaccagcctcagtacgtagaaaaactagagaagatactt
cgcttcgtcatcaaagagaaagctcttaccatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcc
tgggacttctctcctgagcagcttgaccacctctttgactgcttcaaggcgagttggacg
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggagtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgacgtgcctgtagacatcatggaccaggccctcagtgctcacatcaagatactggac
tacagttgctctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagtcagacccagaggagtcctcatgtgttc
tatcgtcatgacctgatcaaccagctccaacacaaccatgctctggtcacgctggtggct
gagaacctttctgcctacatggagaccatgaggcagttctctaaagccgagcaggcagag
tttgacccccagacggtgagggcagggagccgctacagccacgtacaggaagtccaggag
agactcaacttcctgaggttcctgctgaaggatggccagttgtggctctgtgctcctcag
gccaaacagatctggaagtgcctggccgaaaacgctgtcttcctatgtgatagagaggcc
tgcttcaaatggtactccaagctgatgggagatgagccagacctggacccagacattaac
aaggacttctttgagaacaacgtactccagctggacccgtctctgctcacagagaacggc
atgaagtgcttcgagaggttcttcaaggctgtcaactgccgggagggaaagctggtggcc
aaacgcagggcctacatgatggacgacctggagctcataggactggactacctctggagg
gtcgtaattcaagggagcgatgacatcgccagtcgagccatagacctgctgaaagagatc
tacaccaacctcggaccaaaactacaagtcaatcaggtagagatccacgaggatttcatc
cagtcgtgcttcgaccgtctgaaggcgtcgtacgatacgctgcgtgtcctggacggggac
aaggacagcatcaactcggcccggcaggaagccatccgcatggtccgcgtgctcactgtg
ctcaaggagtacatcaacgagtgtgacagcgactaccacgaggagaggaccatactgccc
atgtccagggcgttccgggggaagcacatcacgttgaccgtgcgtttccctaaccagggc
cgtcaggtagatgacctggacatctggtctcacaccaacgacaccatcggctcggtgcgc
cgtggcatcctcacacgcatcaaggccaacgccacgcacaccaagatagagctcttcatt
ggcggggatgtcgtcgacccggccgatgacagaaagctgattggccagctcaacctcaaa
gacaaaacgttgatcacagccaagctgacccaggtgagtgccaacatgccatccagccca
gacagctcctctgactcttccaccggctcacctggtaaccacggcaaccacttcagcgac
gggcccaacccagaggtggagagctgtctccctggagtgatcatgtctctccacctgcgc
tacatatctttcctgtggcaggtagcggacctgggctgtggcattaacatgcctctgtta
cgagatggagccagggtactcatgaagctaatgcctccagataacagtaccgtggagatc
ctgcgtgccgtgtgtctggaccatgccaagctgggagagaacagcctcagccccacactg
gactcgcgcttctttggcccctcgccatcacaagtcctctacctcatagaggtggtgtat
gccctactcatgccagccagcgccacattgggggaggatgccagcgacttccagtacaac
ttcctgaagagtggcgggctgcctcttgtactgagcatgctcacacggaacaacttcctg
ccttcggccgacatggagacacggcgaggggcgtacctcaacgctctgaagatcgccaag
ctgctgctcaccgccgtggggttcggacacgttaaagctgtggccgaagcctgccagccc
aatgctgaggggaccataccagtctcaccgatcaaccaggccactcatgaccaagccctt
gtcctccagagtgccctgcaaaacatccccaaccctgcctcagagtgtatgctccgcaac
gtagctatacgcctggctcagcagatctctgacgagaacttcttccaggcgtccaagtac
atcccagacatatgtgtgatccgggcggtgcagaagatagtgtgggcgtcgggctgcggc
accgtacagctagtctttagctccaacgaagagatcagcaagatctacgagaagacgaat
gcggctaaggagccggacggggaggatgagcaggtgtgttgtgaggccctggagatcatg
accctgtgtttctccctgctgcccaccgctctggacacactcagcaaggagaaggcctgg
cagaccttcatcatagacctgctaatgcactgccacagcaagtcagttcgtcagatggcc
caggagcagttcttcctcatggccaccaggtgttgcatgggccatcgaccccttnccttc
ttcatcaccctcctcttcactgtgctggggagcaccgctaaggagcgggccaagcatgct
ggggactacttcaccctgctcaggcacctcctgaactacgcctacaacagcaacatcaac
ctgcccaacgcagaggtgctgctcaacaatgaaatcgactggctcaagaggatcagggat
gaggtaaagaggacaggggagacgggcgtagaggaaaccatcctggaaggccacatcggg
atcaccaaggagctgctggccttccagacatcagagaagaagtactacatcggctgtgag
aagggaggggccaacctcatcaaggagttgatagatgacttcattttcccagcatcgaat
gtgtacctgcagtacatgaagagtggggagttccccacggagcaagccatccctgtctgt
agcagccccgcctctatcaacgcaggcttcgagctgctggtggcgctggcggtgggctgt
gtccggaatctaaagcagatggtcgacacgctcactgatatgtactacctaggttgtgag
gctctgacagagtgggagtatctccccccggtgggaccgaggcccactaaaggctttgtg
ggactgaagaacgccggagccacctgctacatgaactcagtcatccagcagctctacatg
atcccgcccatacgcaacggcattctggccatcgagggcaccggcaccgatgtggacgat
gacatgtccggtgatgagaagcaggagaacgagagtaatgtggacccacgagatgaggtg
ttcaactaccaccaccagtttgacgacaagccatcgctcagtaagtcggaggacaggaag
gagtacaacatcggggtgctgcgccacctgcaggtcatctttggccacctggcctcctcc
agactgcagtactacataccgagaggcttctggaaacagttcaggttatggggtgagccg
gtgaacctgcgagagcagcacgatgccctggagttcttcaactctctagtggacagtctg
gacgaggctctgaaagccttgggtcacccagccatgctcagtaaggtgctgggtggatcc
tttgctgaccagaagatctgccaggggtgcccacataggtatgagtgtgaggagtcattc
accactctgaatgtagacatcaggaaccaccagaacctgttggactcaatggagcagtac
gtcaaaggagacctgctggagggtgctaacgcataccactgtgagaagtgcaacaagaag
gtggacacagtgaagcggctgctgatcaagaagcttcccccagtgctagccatccagctg
aagaggtttgactacgactgggagagggagtgtgccatcaagttcaacgactactttgag
ttccccagggagctggacatggagccctacacagtagccggggtggccaagctggagggg
gacgacgtcaacccagagaaccaggtgatccagcagaacgagccctctgaaccagagccc
ccaggcagctccaagtaccgcctggttggggtgctggtccactcaggccaggccagcggc
ggacactactactcctacatcacacagaggaacgtgggtggggcagacggcgagcggaac
cgctggtacaagtttgacgacggcgacgtgacggagtgcaagatggacgacgaggaggag
atgaagaaccagtgcttcggaggggagtacatgggcgaggtgtttgaccacatgatgaag
aggatgtcgtaccggcgtcagaagcgctggtggaacgcatacatcctcttctacgagcgg
atggactcactggacaaggacagtgagctggtcaaatacattcaggagctgaccatctcg
tcctcgtccaacaacaagccgtcgcaccaggtcaagatgcccggtgtaatcgagtgcagt
gtgcgcaagcagaacgtgcagttcatgcacaatcgtatgcagtacagcctggagtatttc
cagtttgttaagaaacttctgacctgtaacagtgtctatttaaaccctccgccaggacaa
gaccatctactgcctgaggcggaggagatggctatgattagtgttcagctggctgctaag
ttcctcttcagcactgggttccacaccaagaaagtagtgagggggcctgccagtgactgg
tatgatgcgctttgcgtcctgctgagacacagtaagaatgtacgctactggtttgcacac
aacttcctgtttgcctacgccaaccgcttctctgagtacctgctggagtgccccagtgcc
gaggtccggggcgcgttcgccaaacttatcgtcttcattgcacacttctccctgcaagac
ggaccctgcccctcccccaccgcctctcctgtcggagcctccacccaaccacaggcatgt
gataacctgagtctcagtgaccacctgttgaggactgtgttgaacctgctcaggagagag
gtgtcagagcacggccgacacctgcagcagtacttcaacctcttcgttatgtatgccaac
ctggggctggcagagaagacccagttgttgaagctgagtgtcccagctaccttcatgctg
gtggctctagacgaggggcctggccctcccataaagtaccagtatgctgaactaggcaaa
ctgtacaccgtagtctcccaactggtgcgctgctgtgacgtggccgcgcgcatgcagtcc
tccatcaatggtaacccccctctccctaacccgtacggtgatgccaaccagaccaccccg
gtgatgcctgtgcagcagctggtgggagagatcctgttcgtaaggaccagctacgtgaaa
aagatcattgaggactgcagcaactcagaggagacggtcaagctgctgcgcttcagctgc
tgggaaaacccccagttctcctccactgtactatcagagctgctctggcaggtggcgtac
tcgtacacctacgagctgaggccttacctggacctgctgctgcagatcctgctcattgag
gactcctggcagactcacaggatccacaacgtgctgaagggtataccagatgacagggat
ggcctatttgataccatccagcgctccaagaaccactaccagaaacgggcctaccagtgt
atcaagtgcatggtagccctcttcagcaactgctctgtggcctaccagatactacagagt
aacggggatctgaagcgtaagtggacgtgggcagtggagtggctaggtgacgagctggaa
aggaggccctacacagggaaccctcagtacacctacaacaactggtctcccccagtccag
agcaacgagacctccaacggatacttcctggagcgctcgcactccgcacgcatgaccctg
gccaaggcctgtgaactctgccctgaggagtgtcacttaacgaagcacggtgaggcggtg
tctgaagaagacgctgccatgcggaaatcgtcctcgccacagcagcttttgccaggggaa
gggacaggacagcagcacactgagcccgatgaccaggaagcccctgaagatcaggacacc
tcccctccagatgacatctccctctaccctcattcgtctccagggactacgacacagttt
cagcagcagaacaaccacccccacgggcagccgtacacaggcccagctgcccagcacatg
aacaacccccagcgccccggccctgtcccttcctctgccccaggccctgcgcccggcaca
ggcccacaagcacaagacaactgggagagcactgaggaggtcccctccgtggcccctgct
ccgcctaaggagtaa
DBGET
integrated database retrieval system
