Salvelinus sp. IW2-2015 (Arctic char): 111959465
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Entry
111959465 CDS
T05762
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111959465
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111959465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
CEP104-like_TOG
Spectrin
hSH3
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
111959465
NCBI-ProteinID:
XP_023836803
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All DBs
Position
LG36:19924386..19984104
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AA seq
1321 aa
AA seq
DB search
MGLDSGERIEGQQEDHWLNMEGQLECLPGRQGELELGLDSRLTGERVEESHMKELSDVYS
WEKMKRGTEIDKRIEVEGERVESRIWMEGETEDRSMEEELKLCLRPVEEKRGMSVRISLE
EVERYYRFSRCCYWLQNEIMQQESSPLCAIDITPDLRKQFAYLSGGRGQNSSPIIVFPEF
PAFGEIQEREFHNVLTYLTSIPSLSAAGVGFILVIDRRQDRWAAVKGTLLRIAGSFPGNL
QLVLVLRPTTLFQRTLSDILFKFNKDEFKMKVPMIMLSSVTELHSYIDRTQLTTELGGTQ
EYCHEKWISHRTAIEGFALMVKRTAQILQSFGTELAETELPNDIQATSNLLGTHINKKSK
MKEDLLVALGQGSRLLESINEPVVRDPDHNMNQDELENLATVQRLLSQLNETERAFDEFW
ERHKTKLEQCLLLRHFEHNYREVRCLLDQVAERLTAFSEVGISPAHADHIFRELSSHEER
VCEVLDRAQALAHEGDELIQNSHYAEDSIQPKCIELRAVNEEMSTYLRAKKDHLLRAIEL
HHSLERASKWCDDGIYLLASQPVDRCQSHDGAESALQEIERYLDTAGQNKLTDPSAICRD
YETVLNQEFRDQVEKVFQKQVSMQEMFDKRRVSLKKLAAKHTRPVQPVAPRPEAIKSPLS
SPAKRVLEKSCSEGDSVNRVSCRKVEGQLQSNRSASMSEEDENLAILRKHVMNELLETER
AYVEELLCVLQGYASEMDNPAMASLMPIPLQNKKDVLFGNMPEIYHFHKRTFLRELEEYE
DCPELVGRCFLERMTDLQIYEKYCQNKPRSESLWRQCSDCSFFQECQKKLEHKLGLDSYL
LKPVQRITKYQLLLKELLKYSKGCEGSEDLQEALTSILGILKAVNDSMHLIAITGYDGNM
GDLGRLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKRREENGEGYEK
APSYSFKQSLNMSAVGITENAKGDNKKFEVWCNSREEVYIVQAPTSEVKTTWVKEIRKVL
TTQLEAYREASQQRPSDGLFQFPPGAGAPVSLSPFRRGERSMKEKKGEPSSPDANSCSFP
KTKVEAATSPTSERAAVAKKRFTLQGFSNFNKDLSPPDNKSLTLPRIPFSPSGSPTSPDH
KTKRHEIKSDPTPFGFKDPGPHAHLHLGRVRWFSTSSLLQAKRRGWTKGSLSLDANEEND
GYSSPEEPLNSDPEDEEGKKLVSCAGKYTVVSDYEKGEGQDLSVKSGETVQLIKEGDDGQ
WFVKNLKTKQEGWVAAANILTLIGESKSCQSLTSSEGSGSGNLSTSSSCCETYTSFSDIK
P
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggggctagactcaggggaacgaatagagggacagcaggaggatcattggcttaacatg
gagggacagctagagtgtttacctggacgtcagggagagttagagttaggtttggactca
aggttgacaggggagagagtggaggaatcacacatgaaggaattatcagatgtatattca
tgggaaaagatgaagagagggacggagatagataaaaggatagaggtagagggggagagg
gtggaatctcgcatatggatggagggagagactgaggacagaagtatggaggaagagttg
aagttgtgtttaaggccagtggaggagaaaagagggatgtctgttcgtatttctctggaa
gaggtggagagatactaccgtttctcccgttgctgctactggttacaaaatgagatcatg
cagcaggagagcagtcccctctgtgccatcgacatcacccctgacctcaggaagcagttt
gcctacctctcagggggccgagggcagaacagcagccccatcattgtgttcccagagttc
cctgcattcggagaaatccaggagagggagttccacaacgtgctcacatacctgaccagc
atccccagtctgtctgcggcaggagtgggttttatcctggtcattgaccggcggcaggac
cgatgggctgccgtcaaggggaccctgctccgcattgcaggttcgttcccaggaaacctg
cagttagttctggtattgaggcccaccaccttattccagaggactctctcagatatcttg
ttcaagttcaacaaggatgagttcaagatgaaggtgccgatgattatgctgagttctgtg
actgagctccactcctacatagaccggacacaactgactactgagctgggaggaacccag
gagtactgccacgagaagtggatctcacaccgcaccgccattgagggctttgctctgatg
gtaaagagaacagctcagatcctgcagtcgtttgggacagagctagcagagaccgaacta
cccaatgacatccaggctaccagcaacctactggggacacacatcaacaagaagagcaag
atgaaggaggatctgctggtggctttaggacagggcagcagactgttggagagtattaat
gagccagtggtcagagacccagaccacaacatgaaccaggacgaactggagaacctggcc
actgtacagagactgctttcccagttgaatgagacagaacgggcatttgatgagttctgg
gagagacataagaccaagctggagcaatgtctgctactccgccactttgaacacaactac
agagaggtgaggtgtctgctggaccaggtggcagagagattgacagctttctcggaggtg
ggaataagccccgcccacgctgatcacatcttccgcgagctgagcagccacgaggagaga
gtctgtgaggtactggaccgagcccaggctctggcccatgagggtgacgagttgatccag
aactcccactatgctgaggactccatccagcccaaatgcatcgagctccgagccgtgaac
gaggaaatgagcacttacctgagagcaaagaaagaccacttactcagagctatagagctg
caccacagcctggagagggcttctaagtggtgtgatgatggcatctacctgctggcctct
cagcccgtggacaggtgtcagtcacatgacggggcggagtcagcgctgcaggagattgag
cgttacctggatacggcgggacagaacaaactgactgatcctagtgccatctgcagggac
tacgagacagtgctcaaccaggagttcagggaccaagtggagaaggtgttccagaagcag
gtttccatgcaggagatgtttgacaagaggagggtcagtctgaagaagctggcagccaaa
cacaccaggccagtccagcctgtggccccaaggcctgaagccatcaagtccccactgtcc
tcgccagcaaagagagtgctggagaagagctgctcagagggagactctgtgaacagggtc
agctgtagaaaagtggagggccagctacagagcaacagaagtgcctctatgtcagaggag
gacgagaacctggccatcctcagaaaacatgtaatgaatgagctgctggagacagagagg
gcatacgtggaggaactgctctgtgttctacagggctatgcctcagagatggacaaccca
gccatggccagtctcatgcccattcctctgcaaaacaagaaagatgtgctgtttggcaac
atgccagagatctaccacttccacaagaggacctttctgagggagttggaagagtacgaa
gactgcccggaacttgtgggtcggtgttttctggagaggatgacagacctgcagatctat
gagaagtattgtcagaataaacctcgctctgagagcttgtggagacagtgctccgactgc
tccttcttccaggagtgtcagaagaagctggaacataaactgggcttggactcctatctc
ctgaaacctgtccagaggatcaccaaataccagctcctgttgaaggagctgctgaagtac
agtaagggctgtgaggggtcagaagacctgcaggaggcgctcacctccatcctgggcatc
ctgaaggctgtcaacgactccatgcacctcatcgctatcactggatacgatggtaacatg
ggcgacctgggacggctgctgatgcaggggtcattcagtgtgtggacagaacacaagaaa
ggtcacgccaaggtcaaggacctggcccgcttcaagcccatgcagagacacctgttcctg
catgagaaggccctgctcttctgtaagagacgggaggagaacggggagggctacgagaaa
gccccctcctacagcttcaaacagtccctcaacatgagtgctgtgggcatcactgagaac
gccaaaggtgacaacaagaagtttgaggtctggtgcaactcacgggaggaggtgtacatc
gttcaggccccaacgtctgaggtaaaaacaacgtgggtgaaggagatccggaaggttctg
acaacgcagctggaggcctacagagaagccagtcaacagaggccgtcagacggactgttc
cagttcccccctggtgctggagcacctgttagcctcagtccatttagaagaggggagagg
agcatgaaggagaagaagggagaacccagcagccctgacgctaactcctgctccttccca
aagaccaaagtagaagcagcgaccagtcctacctcagaaagagcagctgtggctaaaaag
cgttttaccttgcagggcttcagcaacttcaacaaagacctctcgcctcctgacaataaa
agcttaactttacccaggattcccttctctccatcaggatctcccacaagccctgaccat
aaaaccaaacgtcatgagataaagagtgatcctactccgttcggctttaaagacccaggc
cctcacgctcacctccacctgggcagagtcaggtggttcagcacctcgagtctcttacag
gccaagaggagaggatggaccaagggctctctctcattggacgccaatgaggagaatgat
ggctactctagccctgaagagcccctgaactcagaccccgaggacgaggagggaaagaaa
ctagtgagttgtgcagggaagtacacagtggtgtctgactatgagaagggagaaggccag
gacctgtcagtcaagagtggtgaaacggtmcagctgatcaaggagggagatgacggacag
tggtttgtaaagaacttgaagaccaagcaggagggctgggtggctgcagccaacattctc
accctgattggagagtccaagtcctgccagtctctcaccagctcagagggcagtggctca
gggaacctcagcacttcatccagctgctgtgagacttacaccagcttctctgacatcaag
ccctga
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