Salvelinus sp. IW2-2015 (Arctic char): 111959471
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Entry
111959471 CDS
T05762
Name
(RefSeq) guanylate-binding protein 1 isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111959471
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Hypoth_Ymh
Motif
Other DBs
NCBI-GeneID:
111959471
NCBI-ProteinID:
XP_023836828
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Position
LG36:complement(28316199..28342772)
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AA seq
689 aa
AA seq
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MDSPMCLVENADGELHVVPGAIKYLMGLNQKVVVVAVVGLYRTGKSYLMNKLAGKRKGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHDDEEGGDAQFVQFFPNFVWAIR
DFTLLLEIDGRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEAGLCGSFRKVADTFCRFIFQESRTKTVKGGHKVTGRMLGHLVNTYVET
IAKGSVPCLENAVLAMAQIENQAAVDEGQVVYQRGMEEVKALFPVDMGQISAHHLRSDHQ
ATQAFMKRSFKDXNGDFLKALAVAIAKHYAXLLIQNEDASEKKCAALLEKLSAPMAQKIK
EGIYTTPGGYELYCNHHDNMVAQYRAEPDKGVRAEEILEQFLREKSLEKNSILQADKKLT
ENEKKIHEEQEKRALAEQAVKMEAEKQHQLEKLIQERERSHQEGICQLEAKMVQEAKETQ
QELERALDSKLHEQEKLMAKGFTEKEAAMKEEIQSLREKEEAKCEKEEQSRNFRAIAQGV
MESVSNGLGHYFNYKKAREQRKAIVFKEQVRFNLKSGAVGNIPDKERMTLKQDKMATPKL
KTGAVGNSKDTTLPKVNTGTTGKSPGSEV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgtttggtcgaaaacgccgacggggagcttcatgtagtccctggt
gccatcaagtacctgatgggactgaaccagaaagtcgtagtggtggcggtggtcgggctg
taccgcaccggcaagtcctaccttatgaacaagctggctggaaagagaaaaggttttgcc
ctgggagccaccatccaatccaagactaagggaatctggatgtggtgtgtgcctcaccct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggatgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaaccttcaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgatgac
gaggaaggaggggacgcccagtttgtgcagttctttccgaattttgtgtgggccatcaga
gatttcactctactactcgagatcgacggcagaaacgtcaccgaagatgagtatctggag
cattccctggagctcagaaaaggtgggggtaaaaagaatctgatgtacaacctcccacga
gagtgcatcaggaactacttcccctcgcgcaagtgctttgtattccccacccctacaact
cctgccaacatgccccacctggattccatggacgaggctggcctgtgtggaagcttccga
aaggttgcagatactttctgccgcttcattttccaggagagccgtacaaaaactgtcaaa
gggggccacaaagttaccgggagaatgctcggccacttggttaacacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcggtgctggccatggctcaaattgag
aaccaggctgctgtggatgagggccaggtagtataccagaggggcatggaggaggtgaag
gccttattccctgtggacatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagayraaaatggggatttcttgaaagcg
ttggcggtggccattgcaaagcactacgctgwccttctcatycagaacgaggatgcctca
gagaagaagtgtgcrgcccttctggagaagctgtctgctccgatggcccagaagattaag
gaggggatctacaccacacctggaggatatgagctttactgcaatcaccatgacaacatg
gtggcacagtaccgggccgagcctgataaaggagttagggctgaggagattcttgagcag
ttcctgagggagaagagtctagagaagaattccatcctacaagctgacaaaaaattgacc
gaaaatgagaaaaagatccacgaggagcaagagaagagagccctggctgaacaggcagtg
aagatggaggccgagaaacagcaccagttagagaaactgatccaggagagggagaggagc
catcaggagggaatctgtcagctagaggctaagatggtccaggaggcgaaggagacgcaa
caggagttggagagagcgctagatagcaagctccatgagcaggaaaagctgatggctaag
ggcttcacagagaaagaggcagccatgaaggaggagatacagagcctgagagagaaggag
gaggccaagtgcgagaaggaagagcagtctcgtaacttcagagccatagcacagggtgtc
atggagagtgtcagcaatggcttaggtcactactttaactataagaaagcccgtgagcaa
cgcaaggcgattgtgttcaaggagcaggtcagattcaatctcaaatcaggtgcggttggc
aatatccctgataaggagcgcatgacactcaagcaagacaagatggccacgcccaaactc
aaaacaggagcagttggcaactctaaagacacaactctgcccaaagtcaacacaggtaca
actggcaaaagccctggctcagaggtctaa
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