Salvelinus sp. IW2-2015 (Arctic char): 111959530
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Entry
111959530 CDS
T05762
Name
(RefSeq) homeobox protein Hox-D3a
KO
K09303
homeobox protein HoxA/B/D3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111959530
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
111959530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
111959530
NCBI-ProteinID:
XP_023836916
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Position
LG36:complement(40833575..40854230)
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AA seq
396 aa
AA seq
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MQKATFYDNSGVFGSYSYPKSESYSYGPSHQPYSTSNLESDYQGPVCPIQTPTVRPPTHK
DNTMNGNNTRSSNSQGNSQQPSIGEQPHAPPLSASSPNSXNTSSQKKKSPSNNDSNTATP
VTNKQIFPWMKETRSNAKPKSNNNNCATAEGESCDEKSPPGPASKRVRTAYTSAQLVELE
KEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPIGHSPDRS
PPLSGPNHIGYSVNINCISYDAPSPPSFSKPQQNMYGLAAYTAPLGGCIPQQKRYPGSEY
EHHSMQGNGGFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAAQIP
GNHHHGPCDPHPTYTDLSSHHASQGRIQEAPKLTHL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagctactttctacgataattctggagtctttggaagctactcttaccccaaa
tccgagtcgtatagttatggccccagtcaccagccctactccacttctaaccttgagagt
gattatcagggtccagtttgtccaatacaaaccccaactgtacggccaccaactcataaa
gacaataccatgaatggcaacaacacgagatccagtaacagccaaggaaacagccaacag
ccgagtattggtgaacagccrcatgcacctccactgtckgcctcttcgcctaactccwgc
aacacttcatctcagaagaagaaatctccctcaaacaatgattctaatactgccacccca
gtcactaacaaacaaatattcccatggatgaaggagacgcgatcgaacgccaaaccgaaa
agcaacaacaacaattgcgcaaccgcagaaggtgagtcctgcgatgaaaaaagccctcct
ggtccagcctccaaacgggtccgaactgcytacaccagtgcacaacttgtagaacttgag
aaggagttccatttcaaccggtacctgtgtcgtccccgaagagtggagatggctaattta
ttgaatctcactgagcgccaaataaagatctggtttcaaaacagaaggatgaartacaaa
aaggatcagaaggctaaggggataatgcactctccsatcggacactccccggacagaagc
ccaccattaagtggcccaaatcacatcggatattctgtcaatataaactgtatcagctat
gacgcgccgtcgcccccttcattctccaaaccacagcaaaacatgtacggcttggcagct
tacacggcaccattaggtggctgtataccgcaacagaaaaggtatccgggctctgaatac
gagcaccacagcatgcaaggcaatggtggctttgccaacgctaatttgcaaggcagtccg
gtgtacgttgggggaaatttcgttgattccatgccagcctcgggtcccatgttcaacctc
ggccatctcccccatccctcatccgccagcgtggactacagctgtgccgctcagattcca
ggcaaccaccaccatggaccctgtgacccccatcccacatatacagacctcagctctcac
cacgcgtctcagggaaggattcaggaagcgcctaaactaacgcatttgtaa
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