Salvelinus sp. IW2-2015 (Arctic char): 111959820
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Entry
111959820 CDS
T05762
Name
(RefSeq) sortilin-related receptor isoform X1
KO
K24498
sortilin-related receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111959820
Membrane trafficking [BR:
salp04131
]
Endosome - Golgi transport
Others
Others
111959820
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Ldl_recept_a
fn3
Sortilin_C
Ldl_recept_b
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
CRLF2-like_D2
BNR_6
SusE
Tr-sialidase_C
Motif
Other DBs
NCBI-GeneID:
111959820
NCBI-ProteinID:
XP_023837393
LinkDB
All DBs
Position
LG4p:8460247..8524136
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AA seq
2252 aa
AA seq
DB search
MGVPPTLTPIASRRSTSSYPNETYTNMATRQTVKMLSPLRFTIYLLFFFAPGTFSSTLRL
HRDQRLLLLQDRGFSTVNANEECIHGIGADAKRRAARNAREDRASGMYQHRIRRSAVQPP
VPKVYGQANLNDSHNQMVVHWAGEKSNVIVALARDSVGAAGPKTSSVYVSYDYGTSFSPI
SERFQLSGGIEKEGNKQVISQFYHSPADNKRYLFADSTNSYLWNSFDFCKTIQGFSIPFK
PTDLLLHSKRANLVLGYDSSHPNKQLWKSDDFGETWVLIQEHVKAYFWGVEPYDSPTTVL
VQRHEPQGVSSILSSTDFFQSEQNRRVILERVDNFQLRDKYMFATTSATLLGSHEPSSVQ
LWVSYNRQPMKAAQFMTRHPITEYYIADASEDQVFVCVNHLNNVTHLYISDTQGLSFSLS
LENVLYYSPEGSGSNTLIRYFTNEPFADLHRVEGLRGVFVATLINGSLSEDNMRSVITFD
KGGTWELLQAPSADSLGGTLDCQLSKGCSLHLAQRWSQLLNIQLRRMPILSKESAPGLIM
ATGSVGKNLANKPNVYVSSSAGARWREALAGPHFYTWGDHGGILMAIAQGGSSTHLKFST
NEGETWTDFRFSDREVYVYQLLTEPGEKSTIFTVFGSYADQRHSWLILQVNASDVLGVPC
AEGDYKRWSPSDEHGNDCLLGREMVYKRRTPHATCFNGEDFDRPVTVSNCSCTRQBYECD
YGFKLSEDLSLQVCLPDPEFSGNLYAPPVPCPVGTTYRRSTGYRKVSGDSCSGGDVEARL
DGEMLPCPVGESNEFILYAVRNSIHRYDLATGTDQALPLSGLHEAVALDFDYERNCLYWA
DISLDTIQRLCLNGSTGQEVIVRKDLQNVEALTFDPISRLLYWVDAGAQRIEVSNPDGDL
RHTLLNSSVLEHPRALVLMPGESLMFWTDWGDRAAGVYRGYMDGSNVSCIVSEGVRWPNG
ITADDQWLYWTEAYGDRIERADFAGXQRSVVMEGLPHPYAIAVFKNDLYWDDWSRRGIFK
APKAGSQDNELIVGRLTGVMDLKIFYKGKTRGHNACADQPCSLLCLPQPGHRHTCVCPDG
APTTTLASGELQCQCPTGYQLHNNTCVKTEHTCLPNQYRCANGKCISSIWKCDSDNDCGD
MSDEQECPTTSCDPSIQYRCVASGSCIPLAFKCDHEDDCGDNSDEEHCESHQCGSGEFSC
ARGVCIRDAWRCDGDNDCRDWSDEANCTVGHHTCEASSFQCLTGHCIPKRWVCDGDDDCQ
DSSDEEQAHCVGDRCNGFLCSNGTCLPASAHCNGVQDCPGGADEQHCDPLCTRYMDFVCQ
NRAQCLFQSLVCDGIKHCEDGSDEDVAYAGCSTHPEFEKTCDPYNFQCANGLCVSLGWKC
DGMNDCGDYSDEANCGSPTEGPGCTRDFQYECRNGRCVPSWWKCDGENDCGDWSDEAQCS
GVTPHTPAPGPXSCAPNXFHCGSGACIVNSWVCDGYADCPDGSDELGCPTAANGTATQAP
WLTQAPPLPPGRCSRGQFLCQKPPTCIPDWQRCDGHQHCLDGSDEAHCPTRGPLTCVNGT
RCADGEACVLDGEKCDGFMDCSDHSDEDNCTTDSLVYKIQNLQWTADFSGAITLTWSRPK
NLPLTSCYFLIYFRLVGTQQWTSMDTHSNKSSYTLSVLKPDTTYQVKVLTQCLSKQHKTN
DVLTLRTPEGLPDPPRNLQLSCDNGEDGTVEASWSTPDKAHGLIREYVVEYSEKGVEWFS
QRSTGNSVEVKNLQPSTLYKFRVAAVTGRGMGNWTEVKSIIPKKALPPPSVITDSITEDS
MSLSFSFNSQYEVRQYVVVLSWVFDAHVKESRNYTVRGSILKAANLTAGTIYEVAVWAQT
GVGDSPTALSRQQTTGTQPEPPLLKARALNQSSVDCSWTVTGSPAQVYGIFFATSFLDLY
RSPHSVNTSASSQTVTVDSDEQYLFLVRAISPYLGPPSEYAVVKMIPNERLPPRNLHKVR
VEKTQATLKWQPPYDSPSAPLTYAVHLKDVVRKTESSYKLTTQNNTVEYCLKGLEPGGHY
SVSVRLRNMSKEASYTLNTMPLPAPEALKILTEKDHVFLFWKSLAVKERSFNESRGYEVH
VYDSLSNSTVLLGNTTENFFRISSLLAGHNYTFSVQARCLLNGQLCGEPALLLYDQLGQG
PIDAVRSSGQSGDMAVVVVPVLFLLLLGLCGVLVVLYLRHRRLQNNFTAFSNSHYNSRLG
SAIFSSGDELGDDDEDTPMISGFSDDVPMVIA
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgcctcctacgcttactccaatcgcctctcgaaggagcacttctagttaccca
aacgaaacatacacaaacatggcgacaagacagacagtcaagatgctgtcccctcttagg
tttacaatatatttgttatttttcttcgctcctggtacattttcctccacccttcgtctt
catcgagaccagcggttattgctactgcaggacaggggtttttctacggtgaacgcaaat
gaagaatgtatccatggaataggcgccgatgcgaaaagacgagctgcacgtaatgcaagg
gaagacagagcttcgggcatgtatcagcatcgcattcggcggagtgcagtccaaccaccc
gtgccaaaggtgtatggacaggccaacctgaacgattcccataaccagatggtggtgcac
tgggccggggagaagagcaatgtcatcgtggcgttggccagagacagtgtcggagccgca
ggtcccaagactagctcggtgtacgtctcttacgactatggaaccagcttctcccccatc
tccgagaggtttcagctgagtggggggattgagaaagaggggaacaagcaggtcatctcc
cagttctaccacagccccgctgacaataagaggtacctctttgcagacagcaccaacagc
tacctctggaactcctttgacttctgcaagaccatccaggggttctccatccccttcaag
cccacagatctgctgctgcacagcaagagggccaacctggtcctgggctatgacagctcc
caccccaacaaacagctatggaaatctgacgattttggagagacgtgggtgttgatccaa
gagcacgtgaaggcctatttctggggtgtggagccgtacgactcccccaccacggtgctg
gtccagaggcacgagccccagggggtgtccagcatcctcagcagcaccgacttcttccag
agtgagcagaaccgccgagtcatcctagagagagtggacaacttccagctccgggacaag
tacatgttcgccaccacttccgcaactttgttggggagtcatgaaccatcctccgtccag
ctgtgggtgtcctacaaccgccagccaatgaaagccgcccagttcatgacccgccaccca
atcacagagtactacattgctgacgcctcggaggaccaggtgtttgtttgcgtcaaccac
ctcaacaacgtcacccacctgtacatctcagacacgcagggcctgtccttctctttgtcc
ctggagaatgtgctatactacagcccagagggttcaggcagcaacaccctcatcaggtac
tttaccaatgagccctttgctgacctgcaccgcgtggagggtctgcgcggcgtcttcgtg
gccacactcatcaacggctcactcagcgaggacaacatgcgctctgtaatcaccttcgac
aaggggggcacctgggagctgctgcaggccccctccgctgacagcctgggaggaacactg
gactgccagctctccaaaggctgctccctccacctggcccagcgctggagccagcttctc
aacattcagctgcgcaggatgcccatactgtccaaggagtcagcgccagggctcatcatg
gccacaggctctgtgggcaagaacctggccaacaagcccaacgtgtatgtgtccagcagt
gctggggccagatggagagaggcgctggccggtcctcacttctacacgtggggtgaccac
gggggcatcctcatggccatcgcccaggggggctccagcacacacctcaagttcagtacc
aatgagggggagacgtggacagacttccgtttctctgacagggaggtgtatgtctaccag
ctgctgacggagccgggggagaagagcaccatctttaccgtcttcggctcctacgccgac
cagagacacagctggctcatcctgcaggtcaacgccagcgacgtgctcggcgtgccgtgt
gccgagggagactacaagcgctggtccccgtcagacgagcacggcaacgactgtcttctg
ggtagagagatggtgtacaagcgacgcacgccccacgccacctgcttcaacggagaagac
ttcgaccgccccgtcaccgtgtccaactgctcctgcacacgccagractacgagtgtgac
tatggcttcaagctgagcgaggacctgtccctccaggtgtgcctgcccgaccccgagttc
tcggggaacctctacgccccgcccgtgccttgccccgttggcactacctaccgtcgcagt
acagggtacaggaaggtgtctggggacagctgtagtggaggggatgtagaagccagactg
gatggagagatgctgccctgtcctgtaggagagagtaatgagttcatcctgtacgctgtg
aggaactccatccatcgctatgacctggccacagggaccgaccaggccctgcccctctct
ggtctccacgaggccgtggccctggactttgactacgaacggaactgcctctactgggcc
gacatctcgctggacaccatacagaggctttgtctaaatggcagtacgggacaggaagtg
atcgttaggaaggacctgcagaatgtggaggccctcacctttgaccccatcagcaggctg
ctctactgggtggacgcgggagcgcagaggattgaggtgtctaaccctgatggggaccta
cgtcacactctgctcaactcctcagtgctggagcatcccagagctctggtcctcatgcca
ggagagagcctgatgttctggacggattggggcgaccgtgcggccggcgtgtaccgaggc
tacatggacggctccaacgtgtcatgcatcgtgtccgagggcgtccgctggcccaacggc
atcacggctgacgaccaatggctgtactggaccgaggcctacggcgatcgcatcgagcgg
gccgacttcgccggcgrtcagcgcagcgtggtcatggagggcctgcctcacccctatgcc
attgctgttttcaagaatgacctgtactgggatgactggtcaaggaggggcatcttcaag
gctcccaaagcaggttcccaggacaacgaactcatagtgggtagactgaccggggtcatg
gacctcaaaatcttctacaagggcaagaccagaggccataatgcctgtgcagaccaaccc
tgtagcctactgtgtctgccccagcccgggcaccgccacacctgtgtatgccccgacggc
gcgccaaccaccaccctagccagcggggagctccagtgccagtgtcccaccggctaccag
ctccacaataacacctgcgtcaagacagaacacacgtgcctgcccaaccagtaccgctgc
gccaacggcaagtgcatcagcagcatctggaagtgcgacagcgacaacgactgtggcgac
atgagcgacgagcaggagtgccccaccacctcctgtgacccgtccatccagtatcgctgt
gtggcgtccggctcctgcatcccgctggccttcaagtgtgaccacgaggacgactgtggg
gacaacagtgacgaggaacactgtgagagtcaccagtgtggatcaggggagttctcgtgt
gcgcgtggcgtgtgtatccgtgacgcctggcgatgtgacggagacaatgactgcagggac
tggtcagacgaggccaactgtacagtgggtcaccacacctgtgaggccagtagtttccag
tgtcttacgggccactgtatccctaagcgctgggtgtgtgacggtgatgacgactgtcag
gacagctctgacgaggagcaagcacattgcgtgggggatcgctgtaatggcttcctgtgt
tccaacggcacctgtctgcctgccagcgcccactgcaacggagtacaggactgcccaggg
ggcgccgacgagcaacactgtgatcccctgtgtacgcgctacatggattttgtgtgtcag
aaccgagcccagtgcctgttccagtctctggtgtgtgacggcatcaaacactgcgaggac
ggatccgatgaggacgtggcctacgccggctgctccactcaccctgagtttgagaagacg
tgtgacccctacaacttccagtgtgccaacgggttgtgtgtgagcctggggtggaagtgt
gacggcatgaacgactgcggggactactctgacgaagccaactgtggctcccccactgag
gggccaggctgcacacgggacttccaatacgagtgtcgtaatgggcgctgtgtgccctcc
tggtggaagtgtgacggagagaatgactgtggagactggtctgacgaggctcagtgctct
ggagtcacgccccacacccctgccccaggcccgkcgtcctgcgcccctaacygcttccac
tgtggctcgggagcctgtatagtcaactcctgggtgtgtgacggctatgctgactgtccc
gatggcagtgatgaactgggctgtcccacagcagccaacggcacggcgacacaggctccg
tggctcacccaagcccctcccytgccccctggccgctgcagcaggggccagttcctctgc
cagaagccccccacctgcatccctgattggcagcgctgcgacggccaccaacattgcctg
gacggttcggacgaagcccactgtcccacgcgagggcctctgacgtgtgtgaacggcacg
cgctgcgctgacggggaggcctgcgtgctggacggtgagaaatgtgacggcttcatggac
tgctccgaccacagtgacgaggacaactgcaccaccgactctctggtctacaagatccag
aacctgcagtggacggcagacttctctggcgccatcaccctcacctggtccagacccaag
aacctgcccctgacctcttgctacttcctcatctacttcaggctggtgggcacccagcag
tggacctccatggacacacacagcaacaagagcagctacacactgtcggtactgaagcca
gacaccacataccaggtgaaggttctgacgcagtgtctcagcaagcagcacaagaccaac
gatgtgttgaccctgagaacgcccgagggattgcccgacccccccagaaacctgcagctg
tcatgtgacaacggagaggacggcacggtggaggcctcgtggagcactccggacaaagcc
cacggcctgatccgggagtacgttgtggagtacagtgaaaaaggtgtggagtggttctct
cagcgaagcaccggcaacagcgtggaggtcaaaaacctacagcccagcactctgtacaag
tttagagtggcagcagtgacgggtcgaggtatggggaactggactgaggttaaatccatc
atccccaagaaagctctaccacctccctcagttatcaccgacagcatcacagaagactcg
atgagcctgtctttcagctttaactcccaatatgaggtgaggcagtatgtggtggtgctg
tcctgggtgtttgatgctcacgtgaaggagagcaggaactacaccgtgcgaggcagcata
ctgaaagctgccaacctgaccgcgggtaccatctacgaggtggctgtgtgggcccagacc
ggtgtaggagacagccccacagccctgtcccgccagcagaccacaggcactcagccggag
cctcccctcctcaaggcccgrgccctcaaccagagctctgtggactgcagctggactgta
accggatcccctgcacaggtgtatggcatcttctttgccacctccttcttggacctgtac
cgcagccctcacagtgtgaacaccagcgctagtagccagaccgtcactgtggacagtgat
gagcagtacctgttcctcgtgcgggccatctctccctacctgggccctccctcggagtat
gcggtggttaagatgattcccaacgagcggcttcctcctcgtaacctgcacaaggtgcga
gttgagaaaacccaggctacgttgaagtggcagcctccctacgactcccccagtgctcct
ctgacrtacgcggtgcacctgaaggacgtggtgcgtaagaccgagagcagctacaagctg
accacccagaacaacacggtggagtactgcctcaagggcctggagcccggcggacactac
agcgtctccgtccgcctgcgcaacatgagcaaggaggccagctacacgctcaacacaatg
cccctgcctgctccagaggctctgaagatcctgacggagaaagaccatgtgttcctcttc
tggaagagtttggccgtgaaggagaggagcttcaatgagagcaggggctacgaggtgcac
gtgtacgacagcctgtccaactccaccgtgctcctgggtaacaccacggagaacttcttc
cggatcagcagcctgctggcgggccacaactacaccttctccgtccaggcccgctgcctg
ctcaacggacagctgtgtggcgagcccgccctgctgctctacgaccagctgggacaaggt
cccattgacgcggtgcggagctcgggtcagtcaggggacatggcggtagtggtggtgccg
gtgctgttcctgctgctgctggggctgtgtggggtcctggtggtcctgtacctgaggcac
cgccgcctgcagaacaacttcaccgccttctccaacagccactacaactcccgcctgggc
tcggccatcttctcctcaggggacgagctgggtgacgatgacgaagacacccccatgatc
agcggcttctcagacgacgttcccatggtgattgcgtag
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