Salvelinus sp. IW2-2015 (Arctic char): 111959885
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Entry
111959885 CDS
T05762
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111959885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111959885
03110 Chaperones and folding catalysts [BR:
salp03110
]
111959885
03029 Mitochondrial biogenesis [BR:
salp03029
]
111959885
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111959885
Enzymes [BR:
salp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111959885
Messenger RNA biogenesis [BR:
salp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111959885
Chaperones and folding catalysts [BR:
salp03110
]
Heat shock proteins
HSP60 / Chaperonin
111959885
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111959885
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111959885
Exosomal proteins of other body fluids (saliva and urine)
111959885
Exosomal proteins of breast cancer cells
111959885
Exosomal proteins of colorectal cancer cells
111959885
Exosomal proteins of bladder cancer cells
111959885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
111959885
NCBI-ProteinID:
XP_023837489
LinkDB
All DBs
Position
LG36:complement(34511646..34519461)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLSTVMRQMRPVCRALAPHLTRTYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISTVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDIAVATGGTVFGDEAVGIALEDIQAHDFGQVGEVSVTKDDTMLLKG
KGDTASIEKRQAQIAEQLENTTSDYEKEKLNERLAKLSDGVAVVKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINADQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAVEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKEEKEGGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctatccacggtgatgagacagatgaggccggtctgcagggccctggccccc
cacctcacccggacttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgttgccgtcaccatgggtcccaagggtcgc
acagtaatcatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccaaaacatcggtgccaagctggtccaggac
gtggccaacaacacaaacgaggaagcaggagatggcaccactaccgccaccgtgctggcc
agagccatcgccaaggagggctttgacaccattagtaaaggcgctaaccctgtggagatc
cgccgtggcgtgatgctggctgtggagaccgtcattgctgaactgaagaggatgtctaag
ccagtcaccacacctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaaaaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctgcatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaagatctctactgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggctgaggacgtggacgga
gaggccctcagcaccctggttctcaacaggctgaaggtgggactacaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcacgacatagccgtcgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgccctggaggacatccaggcccat
gactttggccaggtgggtgaggtgtcagtgaccaaggacgacaccatgctgctgaagggg
aagggagacacggcatccatcgagaagaggcaggctcagatcgctgagcagctggagaac
accaccagcgactacgagaaggagaagctcaacgaaaggctggccaagctatctgacgga
gtggctgtggtcaaggtgggaggaacgagtgatgtggaggtgaatgagaagaaggaccgt
gtgaccgacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccgggggt
ggctgtgccctgctgcgctcaatccctgccctggatgctctcgtgcccatcaacgctgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgacaattgct
aagaacgctggtgtggagggctctctagtggtagagaagatccttcaggccgcggtggag
atcggctacgatgccatggaaggagagtacgtcaacatggtagagaagggcatcattgac
cccaccaaggtggtgaggactgcactaatggatgctgcaggtgttgcatcccttctctcc
actgctgagtgtgtggtcacagagctgcccaaggaggagaaggagggtggcatgccagga
ggtatgggaggtatgggcggtatgggaggtatgggcggtggcatgttctaa
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