Salvelinus sp. IW2-2015 (Arctic char): 111959904
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Entry
111959904 CDS
T05762
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111959904
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111959904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111959904
Ion channels [BR:
salp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111959904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Motif
Other DBs
NCBI-GeneID:
111959904
NCBI-ProteinID:
XP_023837515
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Position
LG36:complement(12312397..12330340)
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AA seq
461 aa
AA seq
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MNTRMNRLLLVSHLLIILAGSAWSSDDETRLVKTLFTGYNKVVRPVAHFKDPVVVTVGLQ
LIQLISVDEVNQIVNSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNA
DGDFAIVHETKVLLEHTGMITWNPPAIFRSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLV
VVNPDSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIV
NVIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGK
YMLFTMVFVIASIIITVIVINTHHRSPSTHTMSPWVRKIFIDTIPNLMFFSTMKRPAKER
QDKNIYGADFDISDISGKPTPTAVTYQSPMTKNPDVRSAIEGVKYIAETMKSDEESNSAA
EEWKFVAMVLDHILLCVFMAVCIIGTLGVFAGRLIELSMTP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaagaatgaatcgtctacttttggtttctcatctccttatcattctagcaggc
tctgcctggagctctgatgatgaaacccgtctggtgaaaaccctgttcactggctacaac
aaggtggtgcgtcctgtcgctcacttcaaggacccagtggtggttacagttggtctgcag
ctcattcaactcatcagtgtggatgaggtcaaccagattgtcaacagcaatgttcgactg
aaacagcaatggaaggatgtgaacttgcaatggaatcctgaggattatggtggaatcaaa
aagataagagtgccctccactgacatttggcgtcctgacctcgtgctctataacaatgct
gacggtgactttgccatcgttcacgagaccaaagtgctgctggagcacactggcatgatc
acgtggaacccccctgccatcttcaggagctactgtgagatcatcgtgctgcacttcccc
ttcgacctgcagaactgcagcatgaagcttggtacctggacctatgatggcaacytggtt
gtcgtcaatcccgacagcgaccgtcctgacctgagtaacttcatggagagtggagagtgg
gtgatgaaggaytaccgcagctggaaacactgggtgtactatgcctgctgcccagacaca
ccctacctggacatcacctaccacttcctgatgctgcggctgcccctctacttcatcgtc
aacgtcatcatcccctgcatgctcttctcattcctcactggcctcgtcttctatctgccc
actgactctggtgagaagatgactctgagtatctctgtcctgctgtctctgactgtgttc
ctgctggtcatcgttgagctcatcccctccacctccagtgctgtgccgctcatcgggaag
tacatgctcttcaccatggtcttcgtcattgcctccattatcatcactgtcatcgtcatc
aacacccaccaccgctcccccagcactcacaccatgtccccctgggttcgcaagattttc
attgacacaattcccaacctcatgttcttctcaacaatgaagcgtcctgcaaaggagaga
caggataaaaacatctatggtgctgactttgacatctcagacatctcaggcaagcccacc
cctactgcagtcacctaccagtccccyatgaccaagaacccagatgtacgcagtgctatt
gagggggtkaartacatygctgagaccatgaaatctgatgaggagtccaacagtgctgct
gaagagtggaagtttgtggccatggtgctggatcacattctgctgtgtgtgttcatggcg
gtgtgtatcattggcaccctaggagtgttcgcaggccgtctcattgagctgagcatgaca
ccttag
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