Salvelinus sp. IW2-2015 (Arctic char): 111959908
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Entry
111959908 CDS
T05762
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111959908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111959908
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111959908
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
tRNA_bind_3
AHSP
Motif
Other DBs
NCBI-GeneID:
111959908
NCBI-ProteinID:
XP_023837522
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Position
LG36:2168067..2210205
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AA seq
1187 aa
AA seq
DB search
MIAEPTVTSRSSVQNENLAVDANSSGAVNHTVGGARNENRQKSLRGKRRARGGSENAKRR
HTKVTNGSLGQNRHLKHGDIEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSGLLDLIS
FFIQCSGCKGLVTAEMFQSRQDDVMRKMVEELDEGSGLQYKKFLAFPWILTVTWPMDMDS
GEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRAFR
HTCTLAAMKLLSSLIGVALSLSVSIENSQRLGEVERTKTSGRRNSPRLERINRKTTELQD
RRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGWMM
HDKLPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLLTL
ISQSAEEVINPEDYKQLFQLVFSSHRPLATAAGELLYTRLLSSPTQAPDLREGASEQDTH
TQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSTQDADL
SAGEQSLVVELLVASVRQAVEGPLLAGRSTCKKVVSAREKKSPVDDCGRLTEHFLKVLPQ
LLIKYSGSPETVASLLKIPQYLHPDSPHAEFPQALSGLLAEMGAVLELHTHPAVLEAAAR
SYLSLCGEETAWHPLARPGRDAVVQCWADRLAALLGDALQDGNFTADAEKTGEILSTLKK
LTAFHNAQDLSRWGLYEQVFPLLSVEIIHGGLPTQLTVEALQCVSYSVLWNLNTSGETLT
SREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSYGPL
LYTPDPKLQRALLAFILEHVFTGAEYDSHSRGSDVESGEGRLEELHRRRSLLAGYCKLIV
HGVLEMSMAADLFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRLKQE
QDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLALIHRDGIEFVFQGFVQRAEK
PSPPYLSYLTILSEFSSKLLRPDKKIVYTYLQRYISEQTISNREECWLPLIYYRASLLAT
GAEGEDAVSFISSDTLKQPSLANRSRSPSVRHSPTADGDVRSPSALTSTETKVRRPHKAS
SSTSPEDRKPEVELGPIVREPPPTIVISEEPFHANEELDVDTVEVDL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaacctacagtcacctcccggtcctcagtacagaatgagaacttggctgtg
gacgcaaactcctctggagctgtcaatcacacagtgggcggagcccggaatgagaacaga
cagaagagtttgagagggaagaggagggcacgggggggctctgagaatgccaagcgccga
cacaccaaggtaaccaatggcagtctgggtcagaacagacacctcaaacatggggacatt
gaggccgtcacattgttcgaggtggtcaccatgggcaggagtgccatgcaggctgtagtt
gatgattggattgaggcgtacatcacagacagagactctggcctcctggacctcattagc
ttcttcatccagtgttctggttgcaaaggtttggtgacagctgagatgttccaaagcagg
caggatgatgtcatgaggaagatggtggaggaattggatgagggttcggggctgcagtat
aagaaattcctggcctttccctggatcctcacagtcacgtggcccatggacatggacagt
ggggaatatcctctcaccatgtctggtccgtactggcgccggttccgtggtgagttctgt
gagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagctacctc
atggacacactcatctctctgctcaccgagctgtccgactcccgtgtacgagccttcaga
cacacctgcacattggcagcaatgaagttgctaagctctctgattggagtagcccttagt
ctgagtgtgagtatagagaacagccagagactgggcgaggtggagagaaccaagacatca
ggaagacgcaactcaccaagactggagagaataaacaggaagaccacagagctgcaggat
agaagggtggagatagaaaacatgatggatgccatattcaaaggagtcttcctgaagaga
taccgggatgtgctcccagagatccggtccatgtgtatggaagagctggctgtgtggatg
aaactttacagtccagtgtttctgactgacagctacctcaaatacatgggctggatgatg
cacgacaagctacctgacgtgcgtctgaagtgtgtgttggggctacagggtctgtacgga
gacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacaggatgatc
tctatgactctggacaaggaccacgaggtggcagtacagaccctgagactactcacactc
atctcccagtcagctgaggaggttattaatcctgaggactataagcagctgttccagttg
gtgttctcctcacatcgccctctggctaccgccgcaggagagctgctctacacacgactg
ctcagctcccctactcaggcacctgacctcagagagggggcgagtgagcaggacacacac
acacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagtgagctc
catcagcatgtagtatacctggtggacagtctgtgggactgtgctggtgccatgctgaag
gactggtcatctcttacctcattactgctacaggacccctccactcaggatgcagatctg
agtgctggagagcagtctctggttgtagagttattggtggcatcagtgcgtcaggctgta
gagggacccctgctggcgggaaggagcacatgcaagaaggtggtaagtgccagagaaaaa
aaatctccggtagatgactgtggcagactcactgaacacttcctcaaggtactgccacag
ttgctgattaagtattcagggagcccagaaactgtggcatctcttttgaagatacctcag
tacttacacccagactcgcctcatgcagaattcccacaggcgttgtcgggcctgctggct
gagatgggagctgttttggagctccacactcaccctgcggtgctggaggcggctgctcgc
tcatacctcagcctgtgtggagaggaaacagcctggcaccccctggcacgacctggcaga
gacgcagtggtccaatgctgggcagacagactggcagcactgctgggtgacgcactgcag
gatggcaacttcactgctgatgcggaaaagacaggagagattctatccacactgaagaaa
ctcactgctttccacaatgcccaggacctgtctcgttggggactgtatgagcaggtcttt
cctcttctctcagtggagatcattcatggtggattacctacacagctgacagtggaagct
ctgcagtgtgtatcttactctgtcctctggaacctcaacaccagcggagagaccctgacc
tcgcgggaaaaggctgtcgcccagaggagtcagatgagagcattgtgtgagaagtgtcta
cgttgtctgtcccacaacgatcagagtgtgaaggagcaggcattcctgtctctgtgtgat
gtcctgacggcccacaactaccagttgcaagtgtgggatccctcgtcttacggccccctg
ctctacactcccgacccgaaacttcagagggcgctgctcgccttcattctggagcacgtc
ttcactggagcagagtacgacagccacagcaggggtagtgatgtagagtctggtgagggg
aggttggaggagctccacagacgtaggagcttattggcaggctactgtaaactcatagta
cacggggtgctggagatgagtatggctgctgatctcttcaagtattacatgaagtattat
aataactttggtgacatcattaaggagactctgagcagaacgcggcagatggataagata
gagagtgctcgcacgctggtgctctgtctgcaacagttgttcctgcgtctgaagcaggag
caggacagtggagtcacctgtagctcaggtgtccaaacattcagcagcatcaaggagctg
gccagacgcttctctctcaccttcggctgggaccagacaaagtccagagagtccctcgct
ctgatccatagggacggtatagagtttgtttttcagggctttgtccagagagcagagaag
ccctctcctccgtacctctcctacctcaccatcctcagcgagttctccagcaagctcctc
agaccagacaaaaagattgtttacacctacctacagaggtacataagtgaacagaccatc
agtaacagagaggagtgttggctgccactcatctactaccgagcctccttattggctact
ggggctgagggggaagatgctgtgtccttcatcagctctgatacgttaaagcaaccgtct
ctagccaatcgctcacgctctccctctgtcagacacagccctactgctgacggagacgtg
aggtccccgtctgctcttacctctactgagaccaaagtaaggaggccccataaggccagc
agcagtacaagcccagaggacaggaagccagaggttgagcttggtcccatcgtcagggaa
cccccgccgaccatagtgatatcagaggagccgttccacgctaacgaggaattggatgtg
gacaccgtggaggttgacctgtga
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