Salvelinus sp. IW2-2015 (Arctic char): 111959944
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Entry
111959944 CDS
T05762
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111959944 (tbc1d4)
Membrane trafficking [BR:
salp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111959944 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111959944 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
111959944 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
111959944
NCBI-ProteinID:
XP_023837574
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All DBs
Position
LG36:complement(5845351..5973957)
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AA seq
1279 aa
AA seq
DB search
MEGRDDKGNKESNLSKPDIQKFALWYIGWSSLDKRTTLPMLPWLVAEIRKKSEKNESGRE
TCSVQAREVQLVLTPPFIRCVPANNVANSSVFIFEHKAQFISRFIHNSNDLTYFAYLIRS
QPDNPESEMACHVFRAYDPNQVPEVISSIRAVSKSALKEDSKPKRDPEEAFYNSQKFEVL
YCGKVTIGHKKAPSTLIDDCINKFRQHELERKHLRLLNDQRGSTESAPVEFMMGDDGDPL
SSTTCSEGLEEPEGLEVDEVTNRGGSGGKIMSNSPSLGSLRGAFPECILEDSGFEEQQEF
RTRCSSLAGSLQRRPLEGALKAAPPRRRHASAPNNVQPSDADKNRTMLFQVGRFEVNLIS
PDSKTVVLEKRFKDISSCSQGINKTDHFGFIFRDPGETGPSQYVCYVFQCASESLVDEVM
LTLKQAFSTAAALQSAKTQVKLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLTDN
EQVDIFERVQRMKPVSDQEENELVILHLRQLCGTKQKSHLHIGEAQLKTPNTTTAPADST
AATGGRFKLDILKNKAKSSLTSSLENIFSRGANQMRGRLGSMGSMGGSFERADDSPSDSP
PGTPPGFPDDDPDALQFRRRAHTFSHLPVKKRISFNDAPTQGVQQGGTGTHSKALLRRQQ
SVNPELLQSSPVSYSRTRSVSESESNFSLSSSFSAPSFLKSFYQGSFGSMGSLADTRTLW
SNGEGRKRTLSGCSSDSVSAPLNLRKVSWRQKIFLRVASPMNKPTSMQHPDHCDVMDLLP
LSPRTFDPSLDPLASLLPTSGDPFTGKRPKRTAVHYRALWKTAIHQQILLLRMEKENQRL
EASRDELHIRKMKLDYQEVGTCIKDVLAFWDRKLSVPGRAKVVPLDKEEVHNAISKGVPK
GRRGEVWLLFSQQHRLRHRLPPGRHAPDTPYQDLLKQLTAQQHSILVDLGRTFPTHQYFS
AQLGAGQLSLYNLLKAYSLLDTEVGYCQGISFVAGILLLHMSEDQAFDMLKFLMYDLGFR
RQYRPDMTSLQIQMYQLSRLLHDYHRELYNHLEEHEICPSLYAAPWFLTLFASQFPLGFV
ARIFDILFAQGSEVIFKVALCLLSSHEGEIVECDSFETIVDYLKTTIPNLTHTQMEETIS
KVLDMDISKQLHAYEVEYHVLQDETVDAVLQSNNSDRLDKLEKTNNQLKKQNMDLLEKLQ
AARQKIQSLEATVENFLSRESKMKHMIRSLEQERQSYQKTIERMRSCLPQDALADVEMTH
MVKPAQGPNGKAKPTAKKP
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcgggatgacaaagggaataaagagagtaatctctcgaagccagatattcaa
aagtttgctctctggtacattggctggtcctccttggacaagcgtactaccctgcctatg
ctgccgtggttggtggcggagatccggaagaaaagtgagaagaacgaatcgggacgcgag
acttgttccgtccaggccagggaagttcaactggtgctcaccccgccgtttattcgatgt
gtgcccgccaacaatgtcgccaactcgtccgtcttcatcttcgagcataaagcgcagttc
atctcacgttttatccacaacagtaatgacctcacatatttcgcctaccttatccggagc
cagcccgacaacccggagtctgagatggcatgccatgtcttcagggcatacgaccccaac
caggtaccagaagtgatcagtagtatccgtgcggtgtcaaagtctgccctgaaggaggac
tccaagcccaagcgggatcctgaagaggccttctataactcccagaagtttgaagtgctc
tactgtggcaaggtgactatcggccacaagaaggctccctccaccctcattgatgactgc
atcaacaagttccgccagcatgaattggagcgcaagcacctgcgcctcctgaatgaccag
cggggatccacagaaagcgcccccgtggagttcatgatgggggatgacggagaccccctc
tcctcaaccacctgcagtgaggggctggaggaacctgaggggctggaggtggatgaggtc
actaacagaggaggttctggagggaagatcatgtccaacagccccagcttgggcagcctg
cggggggccttccccgagtgcatcctggaggactctggtttcgaggagcagcaggagttc
cggacgcgttgtagcagcctggcgggcagtctgcagcggaggcccctagagggtgcgctc
aaagccgccccgccacgccggcgccacgccagtgcccccaacaacgtccagccctcagac
gccgacaaaaaccgcaccatgctcttccaggtcggacgcttcgaggtgaacctgatcagt
ccagacagtaagacggtggtgctggaaaagagattcaaagacatctcgtcctgctctcag
ggtataaacaagacagaccactttgggtttatctttcgagacccgggggagactggtccg
agccagtatgtgtgctacgtcttccagtgtgccagcgaatccctggtggatgaggtgatg
cttactctgaagcaggccttcagtacggcagcagctctgcagagcgccaagacacaggtc
aagctgtgcgaggcctgccctatgcacgacctgcacaaactctgcgagaggattgagggt
ctgtatcctcccagggccaagctggccatccagaagtacctctctcaactgactgacaac
gaacaggtcgacatctttgagcgagttcagaggatgaagcctgtctcggaccaggaagag
aatgagctggtgattctccacctccgccagctatgtggaaccaagcagaaatcccacctc
cacatcggagaggcccaactgaaaacccccaacaccacgacagcaccagcggacagcaca
gcggcgacgggcggccgcttcaaactggacatcctgaagaacaaggccaagagctcgctg
accagctcactggagaacattttctcacggggcgccaaccagatgagaggtcgcttggga
agcatgggaagcatgggggggagctttgagagagcggacgactctcccagcgactcccca
ccaggcacaccccctggtttccctgacgacgacccagatgccctccagttccggcggcgt
gcccacaccttcagccacctgcccgtgaagaagcgcatctcgttcaacgacgcgcccacc
cagggagtccagcaggggggcactggtacccacagcaaggccctgctccgtaggcagcag
tctgtcaaccccgaactactgcagagcagccccgtgtcctactcgagaacgcgcagcgtg
tcggagagcgagtccaacttcagtctctcctcctccttctccgctcccagtttcctgaaa
agcttttaccagggctccttcgggtccatggggtctttggccgacaccaggaccctctgg
agtaatggggagggcaggaagaggactctatctggatgcagcagtgacagtgtgagtgca
cccctcaacctccgcaaagtgtcctggagacagaagatcttcctgcgggtcgcctcgccc
atgaacaagcccacatccatgcagcacccagaccactgtgatgtgatggacctgctgccc
ctctccccccgcaccttcgacccaagtctggaccccctggccagcctactgcccacctcg
ggcgaccccttcactgggaagaggcccaagaggacggcggtgcactaccgggccctatgg
aagacggcgatccaccagcagatactgctgctacgcatggagaaggagaaccagagactg
gaggcaagtcgagacgagctgcacatccggaagatgaagctggactaccaggaagtgggg
acgtgcattaaagatgtgctagccttctgggacaggaagctgagcgttccgggcagagcc
aaggtcgtcccgctggacaaagaggaggtccacaatgcaatctctaagggtgtccctaag
ggcaggcgtggggaggtgtggctcctcttctcccagcagcaccgcctgagacaccgtctg
ccccccggccgccacgccccagacaccccctaccaagacctgctgaagcagctcacggcc
cagcagcactccatactagttgacctgggtcggacgttccccacccaccagtacttctca
gcccagctgggtgcagggcagctgtccctctacaatctgctcaaggcctactctctgtta
gacactgaggtgggctactgccagggcatcagctttgtggcaggtatcctgctgttgcac
atgagtgaggaccaggcctttgacatgctcaagttcctgatgtacgacctgggcttccgc
agacaatacaggcctgacatgacttctctacagattcagatgtaccagttgtccaggctg
ctgcacgactaccacagggagctgtacaaccacctggaggaacacgagatctgccccagc
ctctacgcagccccatggttcctcacactctttgcctcccagttcccactcggattcgtc
gcacggatatttgatatcctattcgcccaggggagtgaagtgatctttaaggtggctctg
tgtctactgagcagtcacgaaggggagatagtggagtgtgatagcttcgagaccatcgtg
gactacctgaaaactacaattcccaacctcacccacacccagatggaggaaaccatctca
aaggtgttggacatggacatctcgaagcagctacatgcgtatgaggtggagtaccacgtg
ctgcaggacgagacggtggatgctgtgctccagtcaaacaactcagaccgcctggataaa
ctggagaagaccaacaaccagctgaagaaacagaacatggatctgctggagaaactacag
gcggcacgtcagaagatccagagcctggaggccactgtggagaatttcctgtcacgcgag
tcaaagatgaagcacatgatccgctcgctggagcaggagcgccagtcctaccagaagact
attgagcgcatgcgctcctgcctgccccaggacgccctggctgacgtggagatgacccac
atggtcaagcctgcccaggggccaaacggcaaggccaagcccaccgccaagaagccctaa
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