Salvelinus sp. IW2-2015 (Arctic char): 111960058
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Entry
111960058 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 44-like
KO
K10515
zinc finger and BTB domain-containing protein 44
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111960058
04121 Ubiquitin system [BR:
salp04121
]
111960058
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
111960058
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
111960058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-C2H2_11
zf-C2H2_9
zf-C2H2_3rep
Motif
Other DBs
NCBI-GeneID:
111960058
NCBI-ProteinID:
XP_023837722
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Position
LG4p:complement(8195496..8215792)
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AA seq
621 aa
AA seq
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MGVKTFTHSSPTHSQEMLEKLNALRNEGHLCDVTIRVQDKLFLAHKVVLACCSEFFRSKL
VGRPDEEDKFVLDLHHVTVSGFTPLLEYAYTSTLSISTENIIDVLAAASYMQMFAVASTC
SEFMKSSILWSAGSMGQEKPQESALGESASSHCALTSLDSSLSPVSSDCSVMERNIPVCR
ESRRKRKSFIMMSPGSPLKCTSLITSPQMPNPSPSSFSETTTQPVDSSLAFPWTFPFGID
RRFHPDKQPKLPESPCRLDQAGPSEVSRRLSDFLACESSIKAPLSLAGPEEDVRVKVERL
SDEEVQETSSQPVSASQSSLSDQQTVPCSEQVQEDLLISPQSSSIGMDEGITEXLPSMQS
TSNAGGHAEDDERLESLQYPYHLYISPSIRPGTNAPDRPFQCPTCGVRFTRIQNLKQHML
IHSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRH
IIRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLMPDYLSQVQEEET
LGQYELVAHGFEGNNSSVQMAVISQVSSTQNCESSTFPLDPLSLKDEKVSEESKTNGSSS
SPDGSEEENTHIKELASISIE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcaaaacctttacccacagttcccccacgcacagtcaagagatgctggaaaaa
ctaaacgccctgcgcaacgagggccacctctgcgacgtcaccatccgggtccaggacaag
ttgtttctggcgcacaaggtggtgctggcctgctgcagcgagttcttccgctccaaacta
gtaggcaggcctgatgaagaggataagtttgtgttggacttgcaccatgtcacggtgagc
ggcttcacccctctgctggagtacgcctacacctccaccctctccatcagcacggagaac
atcatcgacgttttagccgctgccagttacatgcagatgttcgctgtggcgagcacgtgc
tcagaattcatgaagtccagcatcctctggagtgccgggagcatggggcaggagaaaccg
caggagtcggctctcggcgagagtgcttcctcccactgcgccttgacctcattggacagc
agcctgtcacctgtatcgtctgactgcagcgtgatggagaggaacatccctgtgtgtcgc
gagtcgcgacgcaaacgtaagagctttatcatgatgtccccagggagcccactcaaatgc
acctcgctgatcacctcgccgcagatgcccaacccatcgccctcctccttttcggagacc
accacccagccagtggactcttccctggccttcccgtggacgttccccttcggtatcgac
cggaggttccayccggataagcagcccaagcttcccgagagcccatgccgyctggaccag
gcagggccctcggaggtgagccgccggctgagtgacttcctggcctgtgaaagctccatt
aaggcgccgctgtcgctggcaggccctgaggaggacgtgcgtgtgaaggtggagaggctg
agtgacgaggaggtccaggagacgtcgtcgcagcccgtcagcgcttcccagagttccctg
agtgaccagcagacagtaccctgcagcgaacaggtccaggaggacctcctcatcagccca
cagtcgtcctccataggtatggatgagggaatcacagaanngttgccctcaatgcaaagt
acatccaatgctggaggtcatgctgaggatgatgaaagattagaaagcctccagtaccct
taccacttgtacataagcccttccatccgccctggcactaacgcgcctgacagacctttc
cagtgccccacgtgtggcgtccgattcacccgcatacagaacttgaagcaacatatgctc
atccactctggtattaagcccttccagtgtgatcgctgtgggaaaaagttcacacgggcc
tactccctgaagatgcaccggctgaagcacgaaggtaaacgctgtttccggtgccagatt
tgtagtgccacattcacgtccttcggcgaatacaagcaccacatgagggtgtcccgccac
ataatccgcaagccccggatttacgagtgcaaaacgtgcggcgccatgtttaccaactct
ggcaatttaattgtacacctgcggagtctgaaccatgaggcatctgaactagcaaactac
ttccaaagcagtgatttcctcatgcccgactacctgagccaagtgcaggaggaggagact
ctggggcagtacgagctggtggcgcacggcttcgaaggcaacaactcgtctgtccagatg
gcggtcatctcccaggtctcctccacccagaattgcgagagcagcaccttccccctggac
cccttatccctgaaggacgaaaaggtgtcggaggagtcaaagacaaacggcagtagcagc
tccccggatggctctgaggaggagaacacccatatcaaagagctggcttccatttcgatt
gagtga
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