Salvelinus sp. IW2-2015 (Arctic char): 111960086
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Entry
111960086 CDS
T05762
Name
(RefSeq) homeobox protein SIX6 isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111960086
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
111960086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
LPD22
Motif
Other DBs
NCBI-GeneID:
111960086
NCBI-ProteinID:
XP_023837758
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Position
LG37:complement(2934754..2944045)
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AA seq
266 aa
AA seq
DB search
MFPLPMFTPEQVARVCENLEETGDIERLGRFLWSLPAAVPGSAGEALNRHESVMRARALV
AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRALGPVEKYRIRKKFP
LPRTIWDGEQKTHCFKVRHQAERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNW
FKNRRQRDRAASAKNILQQDPTHLPSGSSPEGPAQEHHAHHPRLLAASPRHPGSPEASDC
STSTDRRGTGTSTPDNSVSSDSEFES
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttccctctgcctatgttcaccccggagcaagtggctcgggtgtgcgagaacctcgag
gagaccggcgacatcgagcgccttgggcggttcttatggtccctgcctgccgctgtccct
ggctccgcgggggaggcgctcaaccgccacgagtcagtgatgcgcgccagggcgctggtt
gccttccacggaggaaacttcgaggcgctttaccagatcctccagagccaccgctttacg
cgcgagtctcacgccaagctccaagatctgtggctggatgcgcactaccgtgaggcggag
cggctccggggccgtgccctgggacccgtggagaagtaccgcatccgcaagaagttcccc
ctgcctcgcaccatctgggacggcgaacagaagacgcactgctttaaggtgagacaccaa
gctgagagaactcgcagcctgctcagagagtggtacctccaggacccgtacccaaaccca
tccaggaaacggcacctggcccaggccacgggactcacgcccacacaggtcggcaattgg
ttcaagaaccgacgccagagagacagggctgcatcggcaaagaacattctgcagcaggac
cccacccacctgccttccgggagctcccctgagggtcctgcccaggagcatcacgcccac
cacccccgcctgctggccgcctccccgcgtcacccgggcagcccagaggccagcgactgc
agcacgagcaccgaccgccggggcactggcacctccaccccagacaactccgttagcagc
gacagcgagttcgaatcctga
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