Salvelinus sp. IW2-2015 (Arctic char): 111960124
Help
Entry
111960124 CDS
T05762
Name
(RefSeq) dynactin subunit 1
KO
K04648
dynactin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04814
Motor proteins
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111960124
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111960124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960124
03036 Chromosome and associated proteins [BR:
salp03036
]
111960124
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111960124
Membrane trafficking [BR:
salp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111960124
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
111960124
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
111960124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
111960124
NCBI-ProteinID:
XP_023837797
LinkDB
All DBs
Position
LG37:673466..714772
Genome browser
AA seq
1254 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGATSPDIPESSTAKFLSKQKDIPEVPKSVKQTPISKKS
VTRRSTKWNTPGRLSSASSLPSLLMAPRAIGLSSSRSREDVSEGSLSSKGALGAPVVPLP
SGIPTTSGAQTPATPSKEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKHKIQLEQL
QEWKTKMQEQQTDLQKQLKEAKKDAREALEAKDRYMEEMADTADAIEMATLDKEMAEERS
ESLQVEVESLKEKVEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKDALVRMR
DLSSSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEE
MVETLTERNLDLEEKVRELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVRE
AQKRVEAAQETVADYQQTINKYRQLTASLQDANKELTSAQNANAEQVQQPPAELFDFKIK
FAETKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICK
AELISKQAQEKFDLNGNPVERTGVKMRGPPGEQLSFASGLVYSLTLLQATLHKYQQALNC
CSVQVYTQMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLA
EQTEDCTVQLADHIKVIQSVLDCMGAEGLPTLLTLCVCVCVYYLSLLFTFCSDIKQFCKK
IRRRMPGTDVPGVPAALSFGSPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEG
LNALKLDDVAFKAVEQVYGSQGLNPHECLRQSCSAVISTMNKMATAHAEGEYDAERPQGK
APPVEARAAALRAEITDAEGLGVKLEDRDTVIKELKKLLKIKGEELSEAHVRLSLLEKKL
DTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQ
SKSTIEGLRAPPASGIASIVTGSAGAALAPGAGGLSGPMQVVDSPLLRQQVEAQRLGIKH
LKNENNRLKAEKMRAQLASLPPLHVPKLHLREATSSSSPPAEGPLHGALYRKTEQLLGTL
LKMTATVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVAEHVVSQQPGAKVSS
DFATFPISSFVKAKEGGTVFVGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLIA
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacgggggaggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggccagcgtggcacggtggcgtatgtgggcgccacgctctttgccacgggcaagtgg
gtgggtgtgatcctggacgagcccaagggcaagaatgatggcacggtccaggggaagaga
tacttccagtgtgatgagaactgcggcatctttgtgcgccagtcccagatccagctagtg
gaagatggtgccacctctccagacatcccagagtcttccactgccaagttcctgtccaag
cagaaagacatccctgaggttccaaaatcagtcaaacagacgcccatttccaagaagtcc
gtcacccgtcgtagcaccaagtggaacactccaggtcgtctctcctccgccagctccctc
ccctccctcctcatggctccccgggccatcggtctgtccagctctcggtccagggaggat
gtcagcgagggcagcctatcttccaagggtgcgctgggggctcctgtcgtccccctgccc
agcggcatccccaccacgtccggagctcaaacccccgccacccctagcaaggaggaagag
tctctgcgtggccaggtgaaggacctagaggagaagctggagaccctgaagatgaagcgg
gcggaggacaaggtcaagctgaaggagctggagaaacacaagattcagctggagcagctc
caggagtggaagaccaagatgcaggagcagcagactgacctgcagaaacaactcaaagag
gccaagaaggacgcccgggaggcattggaggccaaggaccgctatatggaggagatggca
gacacggcggacgccatcgagatggccaccctggacaaggagatggccgaggagcggtcc
gaaagcctgcaggtggaggtggagtcgctgaaggagaaggtggaggaactcaccatggac
ctagagatcattaaacacgaggttgaggagaaaggttctgatggagctgcctctagttac
cacgtaaagcagctggaggagcagaacagcaggctgaaagatgctctggtcaggatgcgt
gacctgtcgtcgtctgagaagcaggagcatgtgaagctgcagaagcagatggagaagaag
aatggagagctggagactctgaggacccagaaggagaaactacaggaggagatgaagcag
gctgaggccaccatcgatgagctgaaggagcaggtggatgctgctctcggggcagaggag
atggtagagactctaactgagaggaatctggacctggaggagaaagtcagagagctgaga
gagacagtcactgacctggaagcgatcaacgagatgaatgacgagcttcaggagaacagc
cgagagacagagatggagctgagggagcagttggacctgaacggggccagggtgagagag
gcccagaagagagtggaggctgctcaggagactgtagcagactatcagcagaccatcaac
aagtaccgccagctcactgccagcctgcaggatgccaacaaggaactgaccagtgctcag
aatgccaacgcagagcaggtccagcagccaccagctgagctgtttgacttcaagatcaag
tttgctgagaccaaggcctacgccaaggccatagagatggagctgaggaagatggaggtg
ggccaggccaacagacaggtgtctctcctcacatccttcatgcccgactccttcctgcgt
cacggaggagaccacgactgtatcctggtgctgctgctcataccaagactcatctgcaag
gctgagttgatcagtaagcaggcccaggagaagtttgatctgaacggtaaccccgtggag
aggactggggtgaagatgagaggaccacctggagaacagctcagcttcgcctcaggactg
gtctactctctcaccctgctgcaggccacgctgcacaaataccaacaagctctgaactgc
tgcagtgtgcaggtgtatacgcagatggggactctctactcagagatgagtgtccatgag
cgttccctagacttcttcattgacctgctgcacaaagaccagctggatgagactgtacac
gtggagcctctcaccaaggccatcaagtactaccagcaactatacagcatccacctagct
gagcagactgaagactgcaccgtgcagctggctgatcacatcaaggtcattcagagtgtg
ttggattgtatgggggctgagggccttcctacactactgactctgtgtgtgtgtgtgtgt
gtatattatctatctctgttatttaccttctgcagtgacatcaaacagttctgtaagaag
atcagacgcaggatgccagggaccgatgtaccaggggtgccagctgctctgtcttttgga
tccccagtgtcggagacgctgacggactgcaggcgtcagctgacacgggtggttgccgtg
ctacaggaggtggctgcggcgggggcacagatggtcgcccctctcggggagcaggagggg
ctcaacgctctaaaactggatgacgtggccttcaaggctgttgaacaggtgtatgggtcc
caaggtctaaacccccatgagtgtctgcgtcagtcctgcagcgctgtcatctccaccatg
aacaagatggccactgcccatgcggagggagagtatgatgctgagagaccacagggaaag
gctcccccagtagaggctcgtgcagcagccctcagggcagagatcactgatgcagagggc
ctgggagtcaaactggaagacagagacactgtcatcaaggagctcaagaagttacttaag
atcaagggagaggagttgagtgaagctcacgtccgtctcagtctcctggagaagaagctg
gacacgtcgactaaagacgcagacgaacgtgtggagaagatccagaccaaactggatgag
accctggccctgctcaagaagaaagagaaggagtttgaggagaccatggacgccctgcag
gcagacatcgaccagctggaggcagagaaggcggagctgaagcagcgtctctccagccaa
tcaaagagcaccatcgagggcctcagggccccgcctgcctcgggcatcgcctccatcgtc
acgggatccgccggagccgctcttgccccaggagcagggggtctgtctgggcccatgcag
gtggtggactcccctctcctccgccagcaggtggaggctcagagactgggtatcaaacac
ctgaagaacgagaacaacagactcaaggcagagaagatgagagcccagttagcctctctc
cctcccctccacgtccccaagttacacctgagagaggccacctcttcctcctctccccct
gctgaggggcctctccacggggctctctacaggaagacggagcagctcctggggaccctg
ctcaagatgactgccacagttaaagtggtcgacatcaccgggaagacaccagtgagtgct
agtgctcagctcttggaccagacggctcggctgcagagcctgagtgacgccctggacaaa
ctgaagggtgaagtggcggagcatgtggtttctcagcagcctggggcaaaggtctcctct
gactttgccacctttcccatttcctctttcgtcaaggcgaaggagggaggcacggtgttt
gtaggccgcgtggccatcccgtgtgccaagggccaggagcaggtgcaccgtcttgtccta
tcacagcaacacctgcagcaagtgcaccgcctcctcatagcctaa
DBGET
integrated database retrieval system