Salvelinus sp. IW2-2015 (Arctic char): 111960151
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Entry
111960151 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: acetylcholine receptor subunit beta-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111960151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111960151
Ion channels [BR:
salp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111960151
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
111960151
NCBI-ProteinID:
XP_023837822
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Position
LG37:4266411..4289207
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AA seq
478 aa
AA seq
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MKDQSASETERLLHQKIFQNYNLKVRPAKQWEEKVQVRVGMTLSQLVSLNEKNEEMTTNV
FMNMAWTDYRLSWNPEDYDNIDVLRIPPNKVWRPDIYLINNNDGQFDVALYVNVLVYSDG
TVNWLPPAIYRSSCPIEVAYFPFDWQNCTMVFRSYTYDSSEVDLQYALDEKGEEIHEIII
DENTFTENGEWAICHKPSRKNVNPEDLYEDITFYLIIERKPLFYVVNIIVPCILTMVLAI
FVFYLPPGACEKMTLSISVLIALTVFMLLLADKVPETSLAIPLIVNYVMFTMILVTFSVI
LSVVVLNLHHRTPYTHIMPPWVRKVFIHFLPKYLGMQRPHPEEPLEEEPSDDTPIQSIDG
RRPGGEYFFRKINPELVLPWRGRSESTVQLQRFFDSGQLLSDPPPDLKSAIAAVTYMAEQ
LKKQDGTDSETGDWQYIAIVVDRLFLWLFVIITTLGTLAMFMDAKLNYTPDEPFPLRT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcaaagtgcgtcagagacagagaggctgcttcaccagaagatcttccagaac
tacaacctgaaggtccggccagctaaacaatgggaggagaaagtccaggtccgcgtgggg
atgaccctctcccagctcgtcagcctgaatgagaagaacgaggagatgacaaccaatgtg
ttcatgaatatggcgtggaccgactacagattatcatggaatccagaggattacgataat
atagatgtcctcaggattcctcccaacaaggtgtggcggccagatatctacctcatcaac
aataatgatggtcagtttgacgtggctctgtatgtcaacgtgctggtctacagtgatggg
acagtcaactggctgcctcctgctatctaccgcagcagctgccctatagaggtggcgtac
tttccgtttgactggcagaactgcaccatggtgttccgctcctacacctacgactcatca
gaggtggacctgcagtatgccctggatgagaaaggagaggagatacatgagattatcata
gatgagaacaccttcactgagaacggggagtgggcgatctgccataagcccagcagaaag
aacgtgaaccccgaggacctgtatgaagacatcaccttctaccttatcatcgagaggaag
cctctcttctacgtcgttaacatcatcgtgccctgcatcctcaccatggtcctggccatc
tttgtcttctatctaccacctggcgcatgtgagaagatgaccctgtctatctctgtcctc
atcgctctcactgtgttcatgctgctgctggctgacaaggtccccgagacctccctggcc
atccctcttattgttaactatgtcatgttcaccatgatcctggtcaccttctcagtcatc
ctcagtgtggtggtcctcaacttgcaccatcggaccccctacacacacattatgccccct
tgggtgcgcaaggtgttcatccacttcctgccgaagtacctgggcatgcagaggccccac
ccagaggagcctttggaggaggagcctagtgatgacacgcccatccagagcatcgacgga
cgcaggccggggggagagtacttcttcaggaagatcaaccctgaactggtcctaccctgg
agaggcaggagtgagagtacagtacagctccagaggttctttgacagtggacaactactg
tctgatcctccccccgacctcaagtcagccatcgctgccgtcacatacatggctgagcag
ctgaagaagcaggatggcaccgactcggagacaggagactggcagtacatagccatcgtg
gtggacaggctgttcctgtggctgtttgtcatcatcactactctggggactctggccatg
ttcatggacgccaaactcaactacaccccagacgaacctttccccctgagaacgtag
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