Salvelinus sp. IW2-2015 (Arctic char): 111960187
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Entry
111960187 CDS
T05762
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960187
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111960187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
111960187
NCBI-ProteinID:
XP_023837849
LinkDB
All DBs
Position
LG37:complement(10672851..10749946)
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AA seq
1949 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CMESTYSGQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQVTP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGPENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLRSRERTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPATEEGSDPPSHYSYKSFPRLCMDLFD
RPREVTPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYS
LWFICLPVGVRLAQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRIVARALSQFKQAVQR
TPAMEGPTVITTGSDLGPSVGGSASSDGDRLSHGSADSSSEANGEDHTLFARSLIIGDAA
DNHCSGGVQSDQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSTAQHNGGDIAGSVDSAV
AVAEPPSPVKALPHVPSIVKLSTGTSFDTAMKRGDTAPGKLFSLRSQSEDISLPVEGKSA
APGGSGVAGPAVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILAAAL
SGGGTTPPPTKPLPSAAKALFKDLELESEEGRGPMLGKLSEEEGPVTDPTPLEEGLGKEE
KRTKGDRKEAGGEDEMGLKLEEEDEERDSVGRGSISLPTLEIKEVQVGADPLSLLVSEHE
ELASVTSQELPQSLPAVVSRNLADEIEMYMSLRSPLGPKSCSMELHQEXQGGDPSPDAAP
VKQPLERRSSLPVPPVQHPGGSSGDTMPKRSPAAVTRSKTFAVKASRSPASSRGVVASPR
SLVRSSQSGSLGSVINSISGMKMDTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYS
DDEDELGPGYRERDSFPAGLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSSTSLGSSSG
SSDTGRGPHSTHVEGCMVETYYQNCALEVLMSSCSQCRSCECLVYDEEIMAGWTADDSNL
NTTCPFCRTAFLPLLHVEFHDLRTTTAFYLNPSASGDSIHSTSHQATATGSTENKVGAAV
DTPTPGLISFPESEDPGEAPASQTATHKSLIPEPAQSDPLGLLEHQAGKKGTSLTRSNSV
GGPLQSLVAQREPGHSVSTTSLPCSLTEMDGLGQKRPNPMPVSVPYLSPLVLRKELETLL
ENEGDQVIYTHKFLSQHPIIFWNLVFYFQRLDLPSYLPGLILTSEHCNNGVQLHQTSLSQ
DSKQVYVQLLWDNINLHQEPGDPLYQSWRTLMEKKGTLAPTDYQETRTLLNSIVRSIQTN
DVYGPINLLLREVKRNPEVKRQRGIYREILFLALVALGRENIDVEAFDREYRRAFDELSP
EQLKALHKIDRPPNTNVQWCLKCFGAPVI
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggccaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcccaaggcgccc
attactgacctggccgtcatcaacaagtcggcgggcgagacggtgccggagggcttcacc
tgcatggagagcacctacagtgggcagcaggccaacctcaaccacggcagccttaagagc
cacgagctgttcctctgctacaagagggaccgcgacaagcccccgctcatcgatatcggg
gtgttatacgaagggaaggagcgtctcatccagggctgtgaggtcattcaggtcacgccg
tacggccgttgtgccaacgtcaacaacagctctgctacctcacagcgtatcttcatcacc
ttacgccgcgcgccgcccgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aattgtggcatgtggggctccagtgttttcctgtgctacaagaaatcagtgtccgcgtcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtca
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgcagccatccagttctacgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctgctctctcgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccacccg
ctgcccatcgaaaagcacatctcgcacttcatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctctgcacacgacaccttgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacctgggccca
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagcagaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaatgcc
ccctttcccttcatcgtgggcgtggactcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgagaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactcactggccaac
ctgcaccaccagctgggcatcgtgcgtcggacagcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggccaacatcctgaagggctaccgttcctacctcaaa
cccatcacccaggccccctccgagaaggccacctctgcagactcactatacgacctacag
gggtttctgaggagcagggagcgcacccaccagaagttctactcccagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcacgttcgtcagcgacaaggacacgggcctg
gccttcttcgacgactgcattgagaagctatttccctccgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcagaggacaccaagcttatggaactagacgaatcacag
aagagcgagcacactgtcttcgtcatgcccccagaaccccccgccaccgaggaagggtcc
gaccccccttcccactacagttataagagttttcctcggttgtgtatggacctgtttgac
cgccccagggaggtgacaccagcgctgaggagtagtacacctggggccagcctgtccagc
agccctgcactactggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccaaccctccgctgtgggccaagtgtctgttcagccactgctacagc
ctgtggttcatctgtctgcccgtgggggtgaggctggctcagtccaagagctgggccatg
caacaggcctacaacgtcctgctcaagatgagracctctgaggtggaggtgctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtgtgtacggtcagcctgtcatggccgtc
cgtgtcctggtggagatgaagaaggcaggggtacaccctaacgctatcacctacggatac
tacaacaaggctgttctggaaggcccctggcccagtcggaaccgcagtgggctcttcatg
tgggccaaggtgcgcatcgtggcgcgcgctctctctcaattcaaacaggcagtccagcgg
acgcccgccatggaaggacccaccgtcatcacgacaggaagtgatttaggcccgtcagtg
ggcggctcggcgagcagcgacggcgaccggctgagccacgggagtgcagacagctccagc
gaggcgaacggagaagatcataccctgttcgcacgcagcctcatcataggagacgccgca
gacaaccactgcagcggaggagttcagtctgatcaaggctacggctctaaagatgagttg
caccaggacctagtggatttggctcaatcagcagcccttgtaatcgctgtggatcagtgc
agcaagtccacagcacagcacaacggtggggacatagctggctcggtggacagtgcagtg
gctgtagcggagccccccagccctgtgaaagcactcccacatgtccctagcatcgtcaaa
ctgtccacaggaacgagttttgataccgccatgaagagaggagacactgcccctgggaag
ctgttctctctgcgtagccagagcgaggacatctccctgccggttgagggtaagtctgca
gctccaggtggctccggggtggcgggacctgcggtccaggtccagcgccagaaggccttc
tcggagcgcagctgcagcttcagcgccgagagccgtgccggcatgctgatggagaaacat
ggtgtggaccacatcgtcagccgcatgggcgccgatgcacggatcttggcggcggctctc
tctgggggcggcaccacccccccgcctacaaagccgcttcccagtgcggccaaagccctc
tttaaggacctggagttggagtctgaggaggggcggggtccgatgctggggaaactgtca
gaggaggaggggccagtaacggacccaaccccactggaggaggggctagggaaagaggag
aagaggacgaaaggtgacaggaaggaggcaggaggggaggatgagatgggtctaaagttg
gaggaggaagatgaggaaagagattcagtggggaggggctctatttctctgccaaccttg
gagattaaggaggtgcaggtaggggcagatcccctctccctccttgtctcggagcacgag
gagttagcctccgtaaccagtcaggagctgccgcaatccctgcctgccgtggtgtcccga
aacctggcagacgagattgagatgtacatgagcctacggagcccgcttggccccaaatcc
tgtagcatggagctccaccaggagkgccagggaggggacccttccccggatgctgcccca
gtgaagcaacctctagaacggaggtccagcctccccgtgccccctgtccaacacccaggg
gggtcaagcggggacacgatgcctaaacgcagccccgcagcagtcacacgctccaagacc
ttcgccgtgaaggcctccaggagccctgcctcttccaggggtgttgtggccagcccaagg
tcgctggtgaggtcgtcgcagagtggttcgctggggtcggtcatcaactctatctcgggc
atgaagatggacaccctgctctcgggtcccaagatggacgtgttgaagtcaggcatgaag
caggcaggaaacctggccagcaaggtgtggggggctgtggcctcagcctactcttactcc
gatgacgaggatgaactgggccctggctatagggaaagggacagtttccctgccgggctg
gatgagtccatgctgttggggggtggaggaagtgacagtcccacccacagagggcccacc
caaggcctggtgtctaacggcctgacccagagcagcaccagcctgggcagcagcagtggg
agcagcgacacagggagaggaccccactccacacatgtggaagggtgtatggttgaaact
tattaccagaactgtgcccttgaggtgctgatgtccagctgctcccagtgtcgatcctgt
gagtgtctggtatacgatgaggagatcatggcgggctggacggcagacgattccaacctc
aacaccacctgtcccttctgccgcaccgccttcctgcccctgctccacgtcgagttccac
gacctgcgcaccaccacagcgttctacctgaaccccagcgcrtcaggagacagtatccac
agcaccagccaccaggccacagctacaggctccaccgagaacaaggtaggggctgcagtg
gacaccccgacccctggcctcatcagcttcccagaatctgaggacccaggagaggccccg
gccagccagactgccacgcacaagagtttgataccggagccggctcaatcggatcccctg
ggcctgctggagcaccaggcagggaaaaaggggacgtctctgacacgcagcaacagtgtg
ggcgggcctctacagagcctggttgcccagagagaaccaggacacagcgtgtccaccacc
agcctgccctgcagcctgacagagatggatggcctgggacagaagcggcccaacccaatg
ccggtgtctgtgccctacctcagccccctggtcctccgcaaagaactagagaccctactg
gagaatgagggagaccaagtcatctacacccacaagttcctgagccagcaccccatcata
ttctggaacctggtgttttatttccaacgcctggacctgcccagctacctgcctggcctc
atcctcacctcggaacactgtaacaatggagtacagctccaccagacatccctgtctcaa
gacagtaaacaggtgtatgttcagctgctgtgggacaacatcaatctgcaccaggaacct
ggggatcccctctaccagagctggaggaccctgatggagaagaagggcaccctggccccc
acggactaccaggagacacggaccctcctcaacagcatcgtccgcagcatccagaccaac
gacgtctatggccccatcaatctgcttctccgggaggtcaagaggaacccagaggtcaaa
cgccaaaggggtatctatagggagatcctcttcctggcgctggtggcattgggacgggag
aacatygacgtcgaggcttttgaccgtgaataccgccgggcctttgatgagctgagccca
gagcagctcaaggccctgcacaagatcgaccggccacccaacaccaacgtccagtggtgc
ctcaagtgcttcggcgctccagtcatctga
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