Salvelinus sp. IW2-2015 (Arctic char): 111960241
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Entry
111960241 CDS
T05762
Name
(RefSeq) thyroid receptor-interacting protein 6
KO
K12792
thyroid receptor-interacting protein 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111960241
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
111960241
NCBI-ProteinID:
XP_023837917
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Position
LG37:6275293..6284934
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AA seq
575 aa
AA seq
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MSGPTWLPPRTLGSPERTVPQLSHSGPAMYRQPPMKVSSDPRPKYGVYDQKGGGGGMATR
YMATGPTGGPMQHQEDPGFHPKSNDHYYQPPPHGLKEDRSWNPHMDSYELMHRGPEKPSV
HHSNLDAEIDSLTCMLADLDSHPQNSTQLYDNVPYNKHISGDRYKPSTQPGALSQGRPSM
GYPPHPQTQYHPAPPYPSDPHQVPQYSPQPDYTYAQVSKPYPQPVPASYTTSSTPTGPRF
SVQVKTAQPVTYSQTGRQAEQAYTPPPPHQHSSRPPPQNQTGPQGWYPPHPASQAQELHS
DGGYKEIPGGSRGRGNQGPTPKRGPENPQSGSREAPSPAYQPSQGSAAPRQEEELDRLTK
KLVYDMNHPPTEEYFGRCARCGDNVLGDGSGCIAMEQVFHVECFTCITCHARLRGQPFYA
LDKKSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFNCVVCGCCLDGVPFTVDA
TSQIHCIDDFHRKFAPRCSVCGQAIMPEPGQEETVRIVALDRSFHVNCYVCEECGLLLSS
EGEGRGCYPLDGHILCKGCSARRIQDLSAKISTDC
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcccacctggctgccgccaaggactctgggtagcccagagagaactgttcct
caattgtcccactccgggccagccatgtacagacagccgcccatgaaggtctcctcggac
ccccggcccaagtatggggtctatgaccagaaaggaggtggaggaggaatggccactagg
tacatggctactggacccacaggtggacccatgcagcaccaagaggacccagggtttcac
cctaaatctaacgaccactactaccaaccacctccccacgggctcaaagaagaccggtcc
tggaaccctcacatggacagctatgagctaatgcatcgtggacctgagaagccaagtgta
caccactccaacctcgatgcagagattgactctctcacctgcatgctggccgatctggac
agccatccacagaacagcacacagctgtacgataacgtgccttacaacaaacacatctca
ggggaccgctacaaaccctcaacccagccaggagcactctctcagggcaggccgtccatg
ggttaccccccccacccccagacccagtaccatccagcacccccttaccccagtgatccc
caccaggttccccagtactccccccagccagactacacctatgcccaggtgtccaaaccc
tacccccagcctgtccctgcctcctataccacctcttctacccctactggcccgaggttc
agcgtccaggtcaaaacagcccagcctgtcacctactcccaaactggtagacaagccgag
caggcttacacccctcctccgccccaccagcactcctcgcgccccccaccccagaaccag
acgggcccccagggctggtaccctcctcatcccgcatcccaagcccaggagctgcactct
gatgggggctacaaggagatccccggggggtctagagggcgagggaaccagggccccacg
cccaagagaggcccggagaatccccaatcagggtcaagagaggccccaagtcccgcctat
cagcccagccaggggtcagcagctccgaggcaagaggaggaattggaccggctcactaag
aagttggtgtatgacatgaatcacccacctacagaggaatactttggtcgctgtgcgcgt
tgcggtgacaatgtgcttggcgacggcagtggctgtatcgccatggagcaggtgttccac
gtggagtgtttcacctgcatcacctgccacgcccgtctccgggggcaacccttctacgcc
ctggacaagaagagctactgtgaaagctgttacattagtaccctagagcgctgctctaag
tgctccaaacccatcttggaccgtatcctgcgggccatgggaaaggcctaccacccgcgc
tgcttcaactgtgtggtgtgtggctgctgcctggacggggttcccttcaccgtggacgcc
acctcccagattcactgcatagatgacttccacaggaagtttgctccccgctgctcagtg
tgtggccaggccatcatgcccgaaccgggacaggaggagaccgtcaggatagtggcgctg
gaccgcagcttccacgtcaactgctacgtgtgtgaggagtgtggtctgctcctgtcctcc
gagggcgaggggcgaggctgttatcccctggacggtcacatcctgtgtaagggctgcagc
gcccgccgcatccaggacctctccgccaaaatctccactgactgctaa
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