Salvelinus sp. IW2-2015 (Arctic char): 111960294
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Entry
111960294 CDS
T05762
Name
(RefSeq) RNA-binding protein 4 isoform X1
KO
K13189
RNA-binding protein 14
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111960294
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111960294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
UvrD_C
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
111960294
NCBI-ProteinID:
XP_023838009
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All DBs
Position
LG37:complement(2801028..2819142)
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AA seq
654 aa
AA seq
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MDKSNTVKLFVGNLALDTTQEELSAIFEAYGQVVSCSVLRQFAFVHLQGEGAAERAIREL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALQAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKSSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
LTTGTRAEGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYASSMNP
SHAALYGQLSQIAASPAAASAAAAYSTPVYAHAMANHHHPGAIYLAAPGVEMPAAAAAVN
QAYAMAPALYGGAQHAYGHLGMGAAMSASADPSAAIFEAARVQHYFAQGQQVLAEQQNAA
AVAAAQAAKSGERDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEAAE
AAEDPMAREQCQQYAECYHQQYQQLQQLQEQYQQYAEYYHQQHQQHQQLQQLQYYAEYYQ
QYQQYQQLQQYQQLQQYQQLQQLQYAYPPPNHHAIAAIPAHAMAGHAHHHGQPAHVTALD
AALRPVVPASAVAAAMVAAPRVYEPPLPPPPNRKEAVLRRAPELSLHTPEPPFR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctctttgtgggcaacctggctctagacaccacccag
gaggagctttctgccatctttgaggcgtacggccaggtggtcagctgcagcgttctccga
cagttcgccttcgtacacctacagggtgagggtgctgcggagcgggccatcagggagctg
aacggcagggagttccgggggaggaacctggtggtagaggagtcccggggcagacctctc
cactccaccaaggtgtttgtggggaacctgtcgggcatgtgcaccaccgaggacctccag
gagctcttccagacctttggtaaagtgctggagtgcgacaaagtcaaagccaggctctcc
tcttctgcaggctacgccttcgtgcacatggagaacaaggaggaggctcttcaggccatc
gaggccctccacggcacctccttcaagggacgcccgctctccgtggagctctccaaggtg
cagccctccaagcagaccccgacggggaagatcccctgtgtgagctgtgggaagcagggc
cactacgccggggagtgccctgtagggaagtcctctctggaacagtaccagagccaggca
gctgtgctagctgcagccgccgccgccgcagccggcctgcccctccaggtccagcaaagc
gtccacaactctgtctacaacacctcgacctttgaccccacctacgcggcgttgacgggt
ctcaccaccggcacgcgagcggaaggcaaccccgtcaaccaggcggtgtatggtgccctg
gcaacgcaggtctacggcgctaacgtggccaatcagctctatggggtccaggcagccaat
caggcggcagcgttgacgcaggcgggcgccacgcaggtgtatgccagctccatgaacccc
agccacgccgctctctacggtcagctcagtcagattgccgccagccccgctgcagcgtcc
gctgccgccgcctactccacaccagtttacgcgcatgccatggctaaccaccaccacccg
ggggccatctacctggcagcacctggcgtagagatgcctgcggccgccgcggcagtcaac
caggcctacgccatggcgccggcgctctatgggggtgcccagcatgcctacggccacttg
gggatgggtgccgccatgagcgcgtcggcagatccttcggcggccatctttgaagcagcg
agggtgcagcactacttcgcccagggacagcaggttctggctgagcagcagaacgcggcg
gcagtggcggcggcacaagcggcaaagtctggagagagggaccggagtccactgaggcgc
tctgcggggtccctgctgcccgatcccgtcatgaagcccttcatgtaccagagagccccc
aagcagcgccggccgctgctccccacccctgccgggcgagctgcagaggaagcagcggag
gctgcagaggaccccatggctagagagcagtgccaacagtacgctgaatgctaccaccaa
cagtaccagcagctccagcagttacaagagcagtaccaacagtatgctgagtactaccac
cagcagcaccaacagcaccagcagctccagcagttacagtactatgcggagtactaccag
cagtaccagcagtatcagcaactccagcagtaccagcaactccaacagtaccagcaactc
caacagctccagtacgcctacccgcctcccaaccaccacgccatagctgccatccctgcc
cacgccatggcgggccacgcccaccaccacggccaaccggcccacgtcacggcgctggac
gccgccctcaggccagtggtgcccgcctccgccgtggccgccgccatggtggcagcgccc
agagtgtatgagccgccgctgccgccgccaccgaaccgcaaggaggccgtcctccgccga
gcccccgaactctcccttcacacgcctgagccccccttcagatag
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