KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111960317
Entry
111960317         CDS       T05762                                 
Name
(RefSeq) protein transport protein Sec24D
  KO
K14007  protein transport protein SEC24
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111960317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111960317
Membrane trafficking [BR:salp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    111960317
SSDB
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical zf-Sec23_Sec24 Gelsolin GDP_Man_Dehyd
Other DBs
NCBI-GeneID: 111960317
NCBI-ProteinID: XP_023838048
LinkDB
Position
LG37:8668328..8708472
AA seq 1038 aa
MSQQGYVATPPYSQAQPGMGGYPAGFGSAPAQPLYRHYGGPPQSFPAPPTGMMKPVSSPS
GMPPPQVPSHYGSNGQQNGAHPQSYPAPPYGQPLQSPYHSMAHQGPPPAQQLTNQMGAMN
LGYGPGPMQSPQAPPTSPLTQQQFQTAPPPAMGHPPLGPHSSQMAPPQSPLAGPTMAGPQ
SMGGPPPMGGMGRPFPGPPPPGAGGFQQPGPGAAGPPGHPQQLQGQFGGQMAGPGMAGPG
MAGPGMAGPFQGGAAQMAGPPQKKLDPDSIPSTTQVIEDDQAKRGGQVYTTNLRGQVPPL
VTTDYTVQDQGNASPRFMRCTTYSFPCTADLAKQCQVPLATIIKPFATVPKNETPMYVVN
HGETGPIRCNRCKAYMCPYMQFMDGGRRYQCGFCNCVNEVPAFYFQHLDHMGRRVDFYER
PELSLGSYEFAATLDYCKNNKPASPPAYIFMIDVSYANIKSGLVRLVCDELKTLLDNLPR
EDGAESSMLKVGFVTYNKILHFYNVKSALAQPQMMVVSDTAEMFVPLLDGFLVNFQESRA
VINNLLDQIPDMFADTNESETVFAPVIQAGVEALKAAECSGKLFIFHSSIPTAEAPGKLK
NRDDKKLINTEKEKTLFQPQKAVYEQLSKDCVSQGCSVDLFLFPSQYVDIATMGDVATHT
GGSVFKYSNFQMERDGQHFLSDLRKDVEKAIGFDAIMRVRTSTGFRATDFFGAIHMNNTT
DVEMAAVDCDKAVTVEFKHDDTLSEETGALMQCALLYTTISGQRRLRIHNLSLNCSAQLS
ELYKSCETDALINFFAKSAYRAMLNQPLKTVKEILVNQAAHMLACYRKNCASPSAASQLI
LPDAMKVFPVYLNSLLKTGPLVGSAELSTDDRAHQRLSTTAMGVEDTQLLLYPRLIPLHN
MDVASDVVPTPVRCSEERLTDAGMLLLENGCSLFLWLGQACPPEMIQSIFNVPSLAHVPV
DLRSLPELDNPQSKKLRSIVDSLLDQRPSSMKLMIVKQKDQSEIMFRQHLVEDKGLHGGA
SYMDFLCFVHREIRQVLT
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgagtcagcagggttatgttgccacacctccctattcccaggcccagcctgggatggga
ggctacccagccgggtttgggagcgcgcctgcccagcccctctatagacactatggggga
ccacctcaatcattccccgccccaccaacaggtatgatgaagcctgtgtcgtccccttcc
gggatgcctccgccacaggtccccagtcattacggctcaaacggccagcagaacggagct
caccctcaaagctaccctgcccctccatatggacagccacttcaatccccctaccacagc
atggcccaccagggcccgcccccagcacagcagctcaccaatcagatgggtgccatgaac
ctcggatatggtccagggcccatgcagagccctcaggcacctcccacctctcccctaacc
cagcagcaattccagactgcccctcccccagctatgggacacccacccctgggcccccac
tcatctcagatggctcccccacaatcacccctagctggtccaactatggcagggccccaa
tctatgggtggccccccacccatgggaggcatgggtaggcccttccctggcccaccccct
ccaggtgctgggggcttccagcagcctgggcctggagctgccggaccaccaggacatcct
cagcaactacaaggtcaatttggggggcagatggcgggacccgggatggcgggacccggg
atggcgggacccgggatggcgggacccttccaaggtggggcagcccaaatggccggccca
cctcagaaaaagctggatcctgactccatccctagcacaacacaagtcatcgaggacgac
caagccaaacgagggggacaggtgtacactacgaacctcaggggccaggtgcccccgctg
gtcaccactgactatacagtacaggaccaaggaaacgccagtccaaggttcatgcgttgc
accacctactctttcccctgcacggctgacctggctaagcagtgccaagttcccctggcc
acaatcatcaaacccttcgccacagtgccaaagaatgagactcctatgtacgtcgtgaac
catggtgagactggcccaatccgctgtaaccgctgcaaggcctacatgtgtccctacatg
cagttcatggacggcggccgccgctaccagtgtggcttctgcaactgcgtcaacgaagtg
ccagcattttatttccaacacctggaccacatgggcagaagggtggacttctacgagagg
ccagagctgtcgctggggtcctacgagttcgccgccaccctggattattgcaagaacaac
aagccagccagtcctccagcgtacatcttcatgatcgacgtgtcctatgccaacatcaag
agcggactggtcagactggtgtgtgatgagctgaagaccctgctagacaacctgcccaga
gaggatggtgctgagagctcgatgttgaaggtgggcttcgtcacctacaacaagatccta
catttctacaacgtgaagagtgccctggcccagccccagatgatggtagtatccgacacg
gcagagatgttcgtcccgctgctcgacggcttccttgtcaacttccaggagtcgcgggca
gtcatcaacaatctcctggaccagatccctgatatgtttgccgacaccaatgagagcgag
acggtctttgcccccgtcatccaggctggggtagaggcactgaaggcagcagaatgcagc
ggcaagctgttcatcttccactcctccatccccaccgccgaggcccctgggaaactgaag
aacagggacgacaagaagttgattaacacagagaaagagaagactctgttccagccccag
aaggctgtctacgagcagctgtccaaggactgtgtgtctcagggctgcagcgtggacctc
ttcctcttccccagccagtacgtggacatcgccaccatgggagacgttgccacacacaca
ggaggctccgtcttcaagtacagcaacttccagatggaaagggatggacagcatttcctg
agtgacctgaggaaggatgtggagaaggccatcgggtttgatgccatcatgagagtccgc
accagcacaggcttcagggctacagacttctttggtgccatccacatgaacaacaccaca
gacgtggagatggctgccgtggactgtgacaaggctgtgacggtggagttcaaacacgat
gacacacttagcgaggagacgggcgctctcatgcagtgtgcattgctgtacacgaccatc
agcggccagcggcgtctgcggatccacaacctcagtctgaactgcagcgcccagctgtct
gagctctacaagagctgtgagacggacgccctcatcaacttcttcgccaagtcagcatac
cgtgccatgctgaaccagcccctgaagacggtgaaggagatcctggtcaaccaggcggcc
cacatgctggcctgctacaggaaaaactgtgccagtccctccgctgccagccagctgatc
ctgcctgatgccatgaaggtgtttccggtttacttaaacagcctgttgaagactggtccc
ctggtgggcagcgctgagctctctacagatgacagggctcaccagagactcagcaccaca
gccatgggggtggaggatacccagctgctgctctatccacgccttatcccactgcacaac
atggacgttgccagtgacgtggtgccaactccggtgcgctgctctgaagagcgcctgaca
gatgcaggcatgttrctgctggagaatgggtgctccctcttcctgtggctgggtcaggcc
tgccccccagagatgatccagagcatcttcaacgtgccctccctcgcscatgtgcccgtt
gacctgaggtccctaccagagctggataacccccagtctaagaagctgcgctccatcgtt
gactccttgcttgaccagaggcccagctccatgaagctcatgattgtgaagcagaaggac
cagtctgagattatgttccgccagcacctggtagaggacaaggggctccacggtggagcc
tcctacatggacttcctgtgcttcgtccaccgcgagatcagacaagtcctcacttaa

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