Salvelinus sp. IW2-2015 (Arctic char): 111960341
Help
Entry
111960341 CDS
T05762
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111960341 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111960341 (taf6l)
03036 Chromosome and associated proteins [BR:
salp03036
]
111960341 (taf6l)
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111960341 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
111960341 (taf6l)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111960341 (taf6l)
STAGA complex
111960341 (taf6l)
TFTC complex
111960341 (taf6l)
SAGA complex
111960341 (taf6l)
SLIK complex
111960341 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CENP-S
Motif
Other DBs
NCBI-GeneID:
111960341
NCBI-ProteinID:
XP_023838079
LinkDB
All DBs
Position
LG37:13515044..13522150
Genome browser
AA seq
637 aa
AA seq
DB search
MEERRFAEVPRESVKLMAESAGVELSDDVAALLAEDVCYRLREATQSSSQFMRHAKRRKL
TVEDFNRALRWSNVEAIAGYGAQDALPFRPIKEGELFFVDDRDINLVELALATNIPKGCA
ETMVRVNVSYLDGKGNLEPQGTVPSAVQTLSEDLLKYYQQITRAILGEDPHLMKVALLDL
QSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVSSVM
YCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDPVRP
LCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYGAIL
VAVERLLKMKALSLSQPAEGSSSAQLGSGGVMGFRMSSPGLSPPPEPLSEAALGIASHLQ
GPGGAGTPWDDWTPVPLPAMYCELYSFFGDSLAVRFSTGPSLGGCPPSAPSQPSDTRKEH
PGPAANPDTTRKMPQLTANLNISPRQDGSPRTEPAPPSLAATAPGRSLARSSSSSSIQRR
NSSSRPGQRSAGPSRDVFTKARFPPPQTGPPTFSFLIGGRQMGRRCQGRRFQTSFSSPTP
LSTVPPRAYAHKLPVIGRVGKPVHRWTCSHYSLHLPL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggcgcttcgctgaagtccccagagagtctgtcaaactcatggctgagagt
gcgggagtggaactcagcgacgatgtggctgctttgttggctgaagatgtctgctaccgg
cttagggaagccacacagagcagctctcagttcatgagacatgccaagaggaggaagctg
acagtagaggacttcaacagagcactgcgctggagcaatgtggaggccatagctggctac
ggtgcgcaagatgccctacctttccgaccgatcaaggagggcgagctattctttgtggac
gaccgtgatatcaacctggttgaacttgccctggccaccaacatacccaagggctgtgca
gagaccatggtgcgagtgaacgtgtcttatctggatgggaaaggcaacctggagcctcaa
ggtacagttcccagtgctgtrcaaactctctcggaggatctgctcaagtactaccagcag
atcacccgggccatactgggagaggacccacaccttatgaaggtggctttgctggatctc
cagtccaactccaagattgctgccctcctgccatattttgtatatgtcatcagtggggtg
aagtctgtgagccacgacctggagcagctgaaccgtctgctgcacatggtgaagagcctg
gtgcagaacccctacttataccttggctcctacgtgcgcagcctggtgtccagcgtcatg
tactgcatcctggagccgctggccgcctccatcaaccccctcaacgaccactggacctta
agggactacgcagcactgctgctcagccacatcttctggacccatggagacctggtcagt
ggtctgtaccatcagattctgctgtctctgcagaaggttctgtcagacccggtccgcccg
ctgtgttctcactatggagctgtcgtggggctacacgcactcggatggaaggctgttgag
cgggtgttatatccacacctgccagcctactgggctaacctgcaagctgtcctggatgat
tactcagtctccaacgcccaggtgaaagcagacggacacaaggtctacggagccatcctg
gtggcggtggagcgcctgctgaagatgaaagccctgtctctgtcccagccagcggagggg
agcagcagcgcccagctgggctctgggggcgtgatgggtttcaggatgagttcccccggg
ctcagcccccctccagagcccctctccgaggccgccctgggcatcgccagccacctgcag
ggacctgggggggctggcaccccctgggatgactggacccccgtccccctacccgccatg
tactgtgagctctactccttcttcggcgacagcctggcggtacgcttcagcacgggcccc
agcttgggaggttgccccccgtcagccccctcccagccctctgatacgaggaaggagcac
cctggtcccgctgccaacccagacaccacgcgcaagatgccccagctcactgctaacctc
aacatcagccctcggcaagacgggagccctcgtactgagcccgccccacccagtctagct
gccactgctccaggaaggtccctggctcgctcttcctcctcatcctccatccagcgcaga
aactcctcctcccggccaggacagcgctcagcgggtccatcccgcgatgtgttcaccaag
gcccgtttcccccctcctcagaccggaccccccacattctccttcctcatcgggggacgt
cagatgggccggcgctgccaggggcgccgcttccagaccagcttcagctctcccacaccc
ctgtccaccgtaccgccccgtgcctacgcccacaagctgcctgtcatcgggagggttggc
aaaccggtgcaccgctggacctgctcccattactccctgcacctgcccctctga
DBGET
integrated database retrieval system
