Salvelinus sp. IW2-2015 (Arctic char): 111960580
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Entry
111960580 CDS
T05762
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111960580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111960580
Spliceosome [BR:
salp03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
111960580
Complex B
111960580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
111960580
NCBI-ProteinID:
XP_023838410
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Position
LG4p:15415477..15418126
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AA seq
281 aa
AA seq
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MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGTPVVPMGPGVPTPMPGMPPMSGAPRMMQMPGQPPYMPPPGMMPPPGMGPGGM
PPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgtctcaaccacaccatatacatcaacaacctaaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgccattttctctcagtttggtcaaatc
ctagacattttggttgcccgctccctgaagatgaggggtcaggcctttgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccgttctatgacaaa
cctatgcgtattgggtacgccaaaggggattctgacatcatcgctaaaatgaagggcacc
tatgtggagcgcgaccgtaagaaggagaagagggccaaggtcaagggcccagaggctgca
ggggccaagaagggtgtgccaggaacccctgtagtacctatgggccctggagttccaaca
cccatgcctggaatgccacccatgagcggggctccacgtatgatgcaaatgcccgggcag
cccccttacatgcccccgccaggcatgatgccgcctcctgggatgggccctggggggatg
ccccctggtgccatgcctcccggtgggatgatgccagggcaaatgccccacgcccaggtt
gcagaaaaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctctttaaccagttccctgggttcaaagaggtgcgtctggtacct
ggtcgccacgacatcgcctttgtagagtttgataatgacgtgcaggctggagcggccagg
gaggcactacagggcttcaagatcacccagaccaacgccatgaagatctcattcgccaag
aaataa
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