Salvelinus sp. IW2-2015 (Arctic char): 111960607
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Entry
111960607 CDS
T05762
Name
(RefSeq) ras-related protein Rab-4B
KO
K07880
Ras-related protein Rab-4B
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960607
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111960607
04031 GTP-binding proteins [BR:
salp04031
]
111960607
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
111960607
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111960607
GTP-binding proteins [BR:
salp04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
111960607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
AAA_7
Gtr1_RagA
Septin
ATPase
SRPRB
AAA_22
AAA_16
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
111960607
NCBI-ProteinID:
XP_023838447
LinkDB
All DBs
Position
LG4p:16527163..16538398
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AA seq
213 aa
AA seq
DB search
MSETYDFLFKFLVIGSAGTGKSCLLHQFIETKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ
IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCG
NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKTARTILNKMESGELDP
ERMGSGIQYGDSSLRQLRQPRGTTAQIKQQCNC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacatacgacttcctgtttaagttcctggtgattggcagtgctgggacaggg
aaatcttgcctcctgcaccagttcattgagaccaagttcaagcaggactccaaccacacc
atcggggttgagtttggttccagggtggtcaacgtcgggggtaagacggttaaactacag
atctgggacacagctggacaggagcgcttcaggtctgtgactcgcagctactaccgtgga
gcggcaggggcgctgcttgtctatgacattacaagccgggagacgtacaacgccctgacc
aactggctgacagacgcacggacgctggccagccccaacatcgtcatcatcctgtgtggg
aataagaaggacctggacgcggaccgagaggtcaccttcctcgaggcgtcccgcttcgca
caggagaacgagctgatgttcctggagaccagcgctctgacaggggagaacgtggaggag
gccttcctcaaaactgcccgcaccatcctcaacaagatggagtcaggtgaattggaccca
gagcgaatgggttccggtatacagtatggagattcttccctgaggcagctgagacagccc
agaggtaccaccgcacagatcaagcagcagtgtaactgctag
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