Salvelinus sp. IW2-2015 (Arctic char): 111960610
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Entry
111960610 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111960610
09142 Cell motility
04810 Regulation of actin cytoskeleton
111960610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960610
Membrane trafficking [BR:
salp04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
111960610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
GTP_EFTU
Cdh1_DBD_1
NOG1
FF
Motif
Other DBs
NCBI-GeneID:
111960610
NCBI-ProteinID:
XP_023838450
LinkDB
All DBs
Position
LG4p:16555338..16657941
Genome browser
AA seq
1541 aa
AA seq
DB search
MMMAKKQDVKAPTYNLVVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLST
SDFGGRVVNNDHFLFWGETGRVLEEGPECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRA
ASNKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLMVDGFLLCVDVSRGMNRSFDDQMKF
ITNLYNQLAKNKKPVVLVLTKCDEGVERYIKDSHTFALAKKNLQVVETSARSNXNVDLAF
LTLVQLIDKGRGKPKIIPYFEALKQQSQQIASAKDRYEWLVSRIVKNHNETWPNINXRMQ
TSXEYKEYVFLEGTAKAKKLFQQHVHRLKQEHIERRRRVYLSTLPQALXSLVPXLDEIDH
LSWSXVQKVLETKXDFSHWFVVLDDTPWETTPHIDNMEDERIPQDLLETPVAETIYESHL
EHLXNERKXAEMXWEFKEKLSASPFITAGKPWEEARSFIMNEDFYQWLEEPEYLDIYNRH
QKEIIDRAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLQAER
DALVLKHIHFVYHPTKETCPNSPHCVDCKIEQVLASKFPTRYSFFESHKPGDGNADRINL
VILGKDGLGRELANEIRALCTNDDRYVLDGKMYELSLRPIEGNVRLPVNSFHTPTFTPHG
VLCLYNSKESLSYIVESIEKLRESTLGRRENSLFQLPMNLLLVTKRGVGSVRDIGGETAH
TLILQGQQVAGKLQCGYLDPASPGVGYGRNVNEKQINQVLKGLLECRRPPGSIGSSSPPL
PPSFRDSHSQPIPETDLRIVMCLMCGDDYDVEQLLSPLLLPQHCRPASSLSSGTSVLLEL
TVGAQRHTIDLSLLSFHSSFALRKSRLVHGYIAVYSARRKASMETLCAFLCEVQDIIPVQ
LLAVXESQAELSDSEXAREQVSQGEELAREIEARFNTVVCGPGGVVGGLHRIDLFQPFLK
EVVEKRTIVEATHMYDNVAEACTTESMSPARCNSPSPINTLLDSEEDVEPSPPYPDXTXT
SHLGGFKLPDLESSDAFSVISEISTFESKLNNKVPPQVRPKPXXRKVNLGPYMDQQGTNR
RSLPPAVTWAPGSDGGYDPSDYAEPVDAVTKQRPTEEESIYSVPHDSTQGKIITIRNANK
HSNGGGNGSDSEADSSSLERRRKMSALGVKPRLYRDRSKRLGKFSSFRTSFSIGSDDELG
PPKAPEELGGAHKGDNSINEEGEDPKRRNILRSLRRNTKKPRPKPRHSLSKVESNYFGVP
LASVVTPDRPIPLFIDKCIRYIEATGITTEGIYRVSGNKSEMESMQRQFDQDHNLDLGXK
DFTINTVAGAMKAFFSELPEPLVPYSHQIELVEAFKINDRDQRVHAMKDILRRFPRENYD
VFKYVINHLNKVSQNNRLNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIESFIH
QCAFFFYNQPLSDTPGGHASPTATLSSHGGTSAYSSLAYNSPSLTPAPAPYVMPATPPVI
PHYGPPHTQSQHSPPHTPQSPIQALLPPLHPHHPPTEQHML
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcaaaaaagcaagatgtgaaggcgcccacctacaacctggtcgtggtgggc
ctgtccggcacagagaaagagaaggggcagtgtggtgtgggcaagtcctgcctgtgcaac
cgcttcgtccgtcccagcgcagacgacttttacctggaccacacctccgtgctaagcacc
agcgacttcgggggacgtgtggtgaataatgaccacttcctgttctggggggaaacgggg
cgggtgctggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttcatt
gatgaccaaacgttccagccacaccgttccacagccctccagccctacatcaagagggct
gcttccaacaagctggcctctgcagaraagytgatgtacttctgcacrgaccagctaggg
ctggagcaggactttgagcagaagcagatgccagaggggaagctgatggtggatggtttc
ctcctctgtgtggacgtcagcaggggcatgaaccgcagctttgacgaccagatgaagttc
atcactaatctctacaaccagctagccaagaacaagaagccagtggttctggtgctcacc
aagtgcgaygagggggtggarcgctacatcaaggactckcacaccttcgccytggccaag
aagaacctccaggtggtggagacrtcagcacgytcyaacrtcaatgtagacctggccttc
ctyacyctggtgcagctgatagacaagggccggggcaaacccaagatcatcccctacttt
gaggccctgaagcagcagagccagcagattgcctcggctaaagaccgctatgagtggctg
gtcagccgcatcgtgaagaaccacaatgagacrtggcccaacatmaaccrgcgcatgcag
acctcyscagagtacaaggagtatgtcttcctggagggcacggcyaaagccaagaagctc
ttccagcagcacgtccacaggctcaaacaggaacacattgagcgaaggagaagggtctat
ctcagcaccctgcctcaggcactggkttccctagtccctgmgctggaygagatcgaccac
ctgagctggtccgkggtccagaaggttctggagaccaagcrrgacttctcccattggtty
gttgtgttggacgacaccccstgggagaccacgccacacatagacaacatggaggacgag
aggattccccaggatctcctggagactcctgtggccgagacgatttacgagagccacctg
gagcacctgaraaaygagcgcaaamrggcggagatgargtgggagttyaaggaraagctc
agtgcctctcccttyatcacagcaggcaagccctgggaggaggcacgcagcttcatcatg
aatgaagacttctatcagtggctcgaggaaccagagtacctagacatctacaacaggcac
cagaaggagatcatcgaccgagccaaggaggacttccaggagctgctgctggagtactca
gagctcttctatgagctggaggtagacgccaagcccagtaaggagaagatgggggccatc
caggaggtgttaggggaggagcagaggttcaaggcactgcagaagttgcaggcagagagg
gacgctttggttctcaagcatatccactttgtctaccaccccaccaaggagacctgccca
aatagcccacactgtgtggactgtaagatygaacaggttctagcctccaagttccccact
cgatactccttcttcgagagccataaacccggcgacgggaacgcagatcggatwaacctg
gtyattctgggtaaagayggcctrggtagagaactggcyaatgagatcagggctttgtgc
acyaatgaygaccggtacgtgctggatgggaaaatgtatgagttgtccctccggcccata
gagggtaacgtgcgtctgccggtcaattccttccacacgcctaccttcaccccccatggc
gtactgtgtctctacaactctaaggagtcactatcctacattgtggagagcattgagaag
ctcagagagtccacgctaggccgaagggaaaacagtctatttcagctacctatgaacctg
ctcctagtcaccaaacggggagtagggtccgtcagggacattgggggggaaacggcccac
acgcttatcctccaggggcagcaggtggctgggaagctacagtgtggttacctagacccc
gcctcccctggggtgggctatggacgcaatgtgaacgaaaagcagatcaaccaggtgtta
aaaggtctgttagaatgccgtaggccccctgggagcataggcagcagctcccctccttta
cccccttccttcagagactctcactcccagcccatccccgagacagacctgcggatagtc
atgtgcctgatgtgtggggacgattatgacgtggagcagctcctytcgcctctcctgctg
ccccagcactgtcggccggcctccagcctgagcagtggmacgtccgtgctcctagagctc
acrgtgggggcycagaggcacaccatcgacctytccctgctctccttccactcctcattt
gccctacggaagagccggctggtgcacggctacattgcygtgtattckgccaggcgcaag
gcgtccatggagaccctgtgtgcgttcctgtgcgargtgcaggacatcatccccgtgcag
ytgctkgcrgtggkggagagycaggctgagctgtcggactcygargyggccagggagcag
gtgagccagggggaggagctggcccgggagatcgaggccaggtttaacacagtrgtgtgt
gggccyggaggggtggtgggaggmctgcacaggatagacctcttccagcccttcctgaag
gaggttgtggagaaacgcaccatagtggaggccacacacatgtacgataatgtagcagag
gcctgcaccactgagagyatgagcccggcccgctgcaattcccccagccccatcaacacc
ctgctagactctgaggaggaygtggagccctcgccyccctacccygaygktacccycacc
tcccacctggggggyttcaagctcccygacctggagtccagcgacgccttctcrgtcatc
tccgagatcagcaccttcgagagyaagctcaacaacaaggtscccccscaggtrcggccc
aagcccmccrtacggaaagtcaacctggggccctacatggaccagcaagggaccaaccgc
cgctccttaccccctgctgtcacctgggcgccgggcagygacggtggctacgacccctcg
gactacgccgagcccgtggatgccgtgaccaaacagaggcccacagaggaggagagcatc
tactcggtgccccatgacagcactcagggcaagatcatcaccatccgcaacgccaacaag
cattctaacggcgggggcaatggctcggatagtgaggctgacagcagctccctggagcgg
aggcggaagatgtctgctctgggggtgaagccgcggctgtaccgcgaccgctcgaaacgc
ctgggcaagttcagcagcttccgcactagcttctccatcggcagtgacgacgagctgggg
ccgcccaaagcaccagaggagctgggcggggcgcacaaaggggacaactccattaacgag
gagggcgaggaccccaagagaaggaacatcctcagaagcctgcgcagaaacaccaagaaa
ccgcggcccaagcccaggcattccttatccaaagtagaaagcaactactttggcgtgcca
ttggccagcgtggtgacacctgaccgacccatcccgctcttcatcgacaagtgcatccga
tatatcgaggcaacaggtatcactacagaagggatctacagggtgagtgggaacaagtca
gagatggagagcatgcagaggcagtttgaccaggaccataacctggacctgggtnggaag
gacttcactatcaacacggtggccggggccatgaaggcctttttctctgagctgccagaa
cccctggtgccctacagccatcagatcgaactggtggaggccttcaagatcaacgacagg
gatcagcgggttcacgccatgaaggacatcctgcgccgcttccccagggagaactacgat
gtcttcaaatacgtcatcaatcacttgaacaaggtgagccagaataaccgtttgaacctg
atgaccagtgagaatctgtccatctgtttttggcccactctgatgcggcccgacttcaca
acaatggacgccctgacggccacgcggacctaccagacaatcatcgagtccttcatccac
cagtgtgctttcttcttctacaatcagcccctgtctgacacccctggcgggcacgcctcc
cccaccgccaccctctcctcccacggaggaacctcggcctactcctccttggcgtacaac
tctccctccctcacaccggccccggccccttacgttatgcccgccacgccgcccgtcatc
ccacactacgggccgccccatacccagagccagcattccccgccccacaccccccagtcc
cccatccaggccctactgccccccctgcacccccatcacccccccacggaacaacacatg
ctgtga
DBGET
integrated database retrieval system
