Salvelinus sp. IW2-2015 (Arctic char): 111960620
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Entry
111960620 CDS
T05762
Name
(RefSeq) RNA-binding protein FUS isoform X1
KO
K13098
RNA-binding protein FUS
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03015
mRNA surveillance pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111960620
09122 Translation
03015 mRNA surveillance pathway
111960620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111960620
Spliceosome [BR:
salp03041
]
Complex A
Other components
Complex A specific factors
111960620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
111960620
NCBI-ProteinID:
XP_023838464
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All DBs
Position
LG4p:complement(17494850..17513927)
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AA seq
444 aa
AA seq
DB search
MASDSGYGQPGAPSYGTYPPAQQSGQAYGQGNGSGSYGGQSHAGYGQSAESYGQTTQAAS
YGQPYDGFGQQGSDSAAGYGGADKSSYSQPSSYGGAADGGSYGQAQGGYRGRSEGEGGQG
RRYGGDDGGSDRGSSDGYRGRGRGGYERGGYDRGGRGGPPSGMGGGDRGGYKNYGGPRDY
GSRDEPTGGSGGSQGSGSGGEQDNSDNNTIFVQGLGEDVTSDEVGNYFKQIGIIKLNKKT
GLPMINLYSDKATGRLKGEATVSFDDPPSAKAAIEWFDGKEFQGKPLKVSFATRRAEFTQ
RGGGAGGGGGGRGGGGGGGGGFGGRGRGRGFGGGGGGGGGGGGPNFDIKGGDWPCPNSSC
GNMNFARRYECNKCGTPKPGDSGGDRGGGGRGYGGDRGGGGYRGRGGFRGGDRGGYGGGG
YGGDRGYKMGGRGDHREDRRDRPY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattcgggctacggtcagcctggcgctccaagctatggaacgtatcctcct
gctcagcagagcgggcaggcctacggtcaaggaaatgggagtggctcgtatggtggacag
agtcacgctggctatggacagtctgccgagagttatggccaaacaacacaggcggcaagt
tatggccagccttatgatggctttgggcaacaaggctcggattccgctgctgggtatggt
ggcgctgacaagtcatcatacagtcagccaagttcctacggtggcgccgctgacggcggc
tcttatggacaagctcaaggcggctacagaggtcgaagtgaaggtgaaggcggtcagggc
aggaggtatggtggagatgatgggggctcagacaggggctcttctgacgggtatagaggc
cgagggcgtggtgggtacgagcgtgggggatacgacaggggtggaagaggcggccctcca
tccggtatgggaggtggtgaccgtggtggctacaaaaattacggtggtcctcgagactac
ggctcaagggatgaaccaactggaggtagcggtggtagccaaggtagcggcagcggtggg
gaacaggacaactctgacaacaacaccatctttgtccagggactgggagaagatgtcaca
agtgatgaagtggggaactacttcaaacagattgggatcattaagttgaacaagaagact
ggcttgcccatgatcaacctgtactctgacaaggctactggaagactgaagggagaggcc
actgtctcatttgatgatccaccttctgccaaagctgccattgaatggtttgacggcaaa
gaattccaagggaaacccctcaaagtgtcttttgccacccgaagagctgagttcacgcag
aggggtggcggtgcaggaggaggaggaggggggagaggaggaggaggaggaggaggtgga
ggttttggcggccgtggtcgtggacgtgggtttggaggaggaggaggaggaggtggtggt
ggtggtggacccaactttgacatcaagggaggggactggccatgtcctaacagttcttgt
ggcaacatgaactttgcgcgtagatacgaatgcaacaagtgtggcacaccgaaaccaggg
gacagcggaggagatcgtggtggtggaggccgagggtatggtggtgacaggggcggcggc
ggctacagaggccgtgggggattccgtggaggtgaccgcggtggttatggcggaggtgga
tatggtggtgacaggggctacaagatgggaggaagaggtgaccatagagaagacagaaga
gaccggccatactaa
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