Salvelinus sp. IW2-2015 (Arctic char): 111960628
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Entry
111960628 CDS
T05762
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03440
Homologous recombination
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111960628 (brca2)
03460 Fanconi anemia pathway
111960628 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111960628 (brca2)
03036 Chromosome and associated proteins [BR:
salp03036
]
111960628 (brca2)
03400 DNA repair and recombination proteins [BR:
salp03400
]
111960628 (brca2)
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111960628 (brca2)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
111960628 (brca2)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
111960628 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
111960628 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
111960628
NCBI-ProteinID:
XP_023838473
LinkDB
All DBs
Position
LG4p:17725691..17759184
Genome browser
AA seq
2807 aa
AA seq
DB search
MDIRRNMFDAFKDQIWEELGPLNPNWFEELTAEASSWDRGDTEKENPSTAISCGQDGSFK
TPLGKCPLDGDMFSTPKIFRQRRPQSPETLTEDALFSPDQGTSATEKMDTSPCLFGKSID
SETPSKSYRTRLHGDSFGLLDTPKPSMQAHSAKRISESLGAQLDPDMSWTSSLNTPVMSP
TIILTKSEEHRTMCPVRIATEEQVMFVRKLFPSAMESGSTMLSPEQNDRPLCQHNGPDSH
LPGVIDISPGFQDTLPGDSGSHWKQTLPDAIEDGEIRSTVAGVLDGAEDVLSIFFSNRSL
ALQRVKTKERIKRKQSGATKEHVPTSTMEHDKVSSERAGEYQHTGETSEPLESRTDMKSG
DLATSQWTPINVPDISGYDMDSFHHEGSSSTNHIIPQDGISETFRDFTGSQQPDGGFSKQ
TVQVESALSRRTLPYTSQPEGSQLTGSVVESALQHTFPRKTRTFVYCVKNPLLSVQEKYV
TQMLPASPGTAPRGENQNIKQSETIPNEAEFNHLNKTALDGKKPLVQQKSATEENIVSQA
PTKDPDLDMSQLCRVFAQDFSQVVDYSQPCSKRADAIKNGFSASACLLAMRLRNRKQLNK
LEWGQKPEHLNSGISDEMHISGSQFSNSANTSRMKSTLCDSGFPPSTLSDVTQTESSHVH
PSSEKSYGNQSSRGFETGNNWIISLPPEAIKKAKASLDDLTEENMTDVVTAASEVKAVLS
CVTGSQLSTEVKFISPLNIAKRSKQTSVKLNGQVHVQTPRSVNVSVSSHPGSGFKMASNK
KIHFFSANLEKDKDLFKEIEDEIPAVNIPEISLPEEGNMSCGLELVDGSHLPPLLYTHQR
SVDSQGPLTASQRADVSELCSLLEAADSQFEFTQFKPAKLNFYVPDGSPPRQSEKELGPD
FLTGIDFDDSFNSDVEKQSVKMATPDKNTTISHCKEICQVTTTKIKSSGASSSNSTEKPK
EHVIHRRVLYIPSYSSENIAERSFGLLTKTTNKNHLLDMDTNTSGMECESKDLPKLGVGF
KTAGGNAMIVSEKCLSKARALFADFEGKNCAPKCAVKNPEQVETSPVQYRGEVDTNVDSN
VTHFHGPEKKVDLKEPRDEYIDKIKVDFTHSHKHGDGGFQTASGKGVTISAKALQKANAV
FKDCDAMEGAGCASEKLSKTSVVSETGSNNFERNNCGFSTARGKRVDVSAKSLLKARTLL
NDCDELDNSKPGKIPSLNAKIPSQNIPQKSDCDFKKPSSKAASISAKIPFTAETPFDGGT
SHDVLGAKSKMLEPENSQTHAKDPLKNGCGFSTASGKRVSVSEGALLKAQALLSECHVDG
EELSKPKKKITVDLHTIQNPTQKHSGFKTATVSEVTVSPKVHKQAKAVFNNCDSNMDSLI
SAEAKQGNIDVKSADGLMNNPGKSYCAFMTAGGKNVHVSEKGILKAKSILNENLDNCTDS
NAIEEAWFSDGRFSLLTEDGTGVKKGAGNKSNSSDLNDDEKSCDFSTAGGRTVHMSDGAL
QKAKSILNECDVIENPQPENGHKVHLEKIPTKETHEISHGSTASGKGVFISEKALQEACE
DTLASDTDPHKRSEANRPLKVPTPHINVQRVPVKAVRLEDREVIQTIVGMACQSSSVECQ
AESSLLHFESLGFSGCSVTQRRYFAQEAMDCTKALLEDEDLTDHCPGTPIQANPMSCKGG
FEMRSGIVKRSAEDLGMTDQPPLKRRLLTKFDRTVDCSRRSELTPAKSSSDGIFKDRRVF
KYNVALQPNVTRPYRANQRCVDTRLNKTEPQKTTSDPTAEDRKPVSSKTAVFVPPFRKNV
KLEPQRSSGLKDKTRAPGVFVSPFRKDNRVTREGSFKPSEDNHSPFISEMPSKTTSVPLP
EYNPITDTGSDNAKESIKEQDPQNIDKTDLGDDGGHCLPVTLGGEDATAEESIAGQLAPD
GTLLDVVYDAECLQLARDMQDMRIKKKKRQTIRPLPGSLYLAKTSGVARLTLREAVGGRH
PVQHTHKQLYGYGVHRHVSDISSESAEAFRFVCRHFFRREAFVEGCIQLADGGWLIPRND
GTAGKHEFHRALCDSPGVDPKLISEAWVFNNYRWVVWKQACMERAFPAVMGSLCLTPEQV
LLQLKYRYDLEVDNSKRSALRKIMERDDTAVKTMVLCVCGVVTKGHNSTRQSWSETKTKT
PPGSAAGSKATSSPVGLIWLTDGWYAIKAQLDVPLTAMLRRGRLAIGGKVLVHGAELVGS
QDACSPLEAPDSLMLKIRANGTRVARWYTRLGFYSNPSPFLLPLSSLYSNGGPVGCVDIV
VLRSYPTQWMEKKSDGGFAFRAGRAEEREARRHGDAKHKAMEILFAKIQAQFEKEDVCGK
PRGRRRTLRGRDIETLLDGEELYDAVENDPVYLEGRLSEQQREALNSYRRCVGERRQAAL
QERFRQALESTQEGEGGSCHNRDVTPIWKLSVADSRAKPGSNAVYLLNIWRPSMDLQSLL
KEGCRYKAYKLSTSEGKKRAGNTSIQLTATKKTQFQNLQASAGWLSERFQAREAVGFRVL
LNRDLKPLCGEVDLVGYVISITDRQGHSPVVYLVDGWLDFVKVRCCSSLVQQGLEEVVKP
LALVALSNLQLRAHPSSPTPIRSAIPGLYAGELVSFSTNPKEPHLQEAATQLRTLVQGQE
HFFRTAEERLSNLVQGSAQCLPPPPWTPGWKADAKPDARTTMTPQQSVRSVGPFTPLNRV
VPPPPACSSGGDNKDPKSLKRKRCLEYLCRVPSPPPLCPLGTMTLPSPSVNKTFNTPRRT
ETHRILKTPLAPAPQHVHLPLEDEWVEDEELVMIDTQALHDGIGIDT
NT seq
8424 nt
NT seq
+upstream
nt +downstream
nt
atggacataaggagaaacatgtttgatgctttcaaggatcaaatatgggaagagttggga
cctctgaacccaaactggtttgaggaactcactgctgaagcttccagttgggatcggggt
gatacagagaaagagaatcccagcactgcaatatcttgtggacaagatggcagtttcaaa
acaccattggggaaatgtccccttgatggtgatatgttctctaccccgaagattttcagg
cagagaagaccacagtctcctgagacattgacagaagatgcacttttttcccctgatcaa
ggaacctctgcaacagaaaaaatggacacaagcccatgtttatttggaaaatcaatagac
agcgagacccccagtaaatcctatagaacaaggctgcatggagacagttttgggctgctt
gacacaccgaaaccctctatgcaggcacactctgccaaacgtatatctgaaagtcttggt
gcacagttagaccctgatatgtcctggaccagttctctcaatacacctgtcatgtcgccc
accatcattttgactaaaagtgaggagcataggactatgtgcccagtaagaattgctacc
gaagagcaggttatgtttgtgcgaaagcttttcccctcggccatggagtctggaagcaca
atgctgtcaccagaacagaatgatagacctctctgtcaacacaatggaccggattcccac
ttgcctggtgtgattgacatctcccctggctttcaagacacgctacctggtgacagtggc
agccattggaaacagactttaccagacgctattgaggacggagaaatccgcagcactgtg
gccggtgtcctagatggagctgaggatgtcctctccatattcttcagcaacagaagtttg
gctttacaaagggtgaagaccaaagagagaatcaaaaggaagcaaagtggcgcaactaag
gaacacgtacctacttctacaatggaacatgacaaagtatccagtgagagagcaggagaa
taccaacacactggggaaacctctgagcctcttgagtccaggactgacatgaagtctggg
gatttggcgacttctcagtggacgccaataaatgtacctgatatttcaggctatgatatg
gattcatttcaccatgaggggtcttcctctactaatcacataattccacaagatggcata
agtgaaacattccgtgacttcactgggagccagcagccggatggcggtttctctaagcag
actgtccaggtggagtctgccctttccagaagaacattaccatacaccagccagccagag
ggatctcaattgacagggtctgtagtcgaaagcgctctgcaacacacctttcccaggaaa
acaaggacatttgtttactgtgtcaaaaatccacttctgtcagtgcaagaaaaatatgtt
actcagatgttacctgcatcacctggaactgctcccagaggtgaaaatcagaacataaaa
caaagtgaaaccataccaaatgaagcggagtttaatcatcttaacaaaactgccttggat
gggaaaaagccgctagttcagcagaaaagtgcaactgaagaaaatattgtttcacaagca
ccgaccaaagaccctgatcttgatatgtcacagctttgcagggtatttgcgcaagatttt
agccaagtagttgactacagtcaaccatgcagcaaaagagcagatgctattaaaaatggc
ttctctgcatcagcttgtctcttagcaatgagactaaggaacagaaaacagttgaataaa
ctagaatggggccagaaacctgaacatcttaactctggcatcagtgatgaaatgcatatt
tctggttctcagtttagcaactctgcaaacacgtctagaatgaagagtacattgtgtgat
agcggcttccccccctccaccctttctgatgtcacacaaacagaatcatcccatgttcac
cctagctctgaaaaaagttatggaaatcagtcatctagagggtttgaaacgggtaacaac
tggattatctctttgcctccagaagcaataaagaaagcaaaagcatcattggatgactta
actgaggaaaatatgactgatgttgttactgctgccagtgaagtgaaagctgtgttgtca
tgtgtgacaggaagccaactgtccacagaagtgaagttcattagtccactcaacattgcc
aaaaggtcaaagcaaaccagcgtaaaattgaatggtcaagttcatgttcagacccctcgg
agcgtcaatgtttcggtttcctcacaccctgggtctggtttcaaaatggcctccaataag
aagatacattttttttcagcaaatctggagaaagacaaggatctgtttaaggagattgag
gatgaaatacctgcagtcaatattcctgagataagccttcctgaggaaggcaacatgtca
tgtggattggagcttgttgatggatctcatttaccacctctactctatacacaccagagg
tctgttgatagccaaggtccgttgacagcctcacagagagctgatgtttcagaattgtgc
agtctcttagaagctgcagacagccaatttgagttcacacagtttaaaccagcaaagctg
aacttctatgtaccagatggtagcccccctcgtcaatctgagaaagaattgggtcccgac
tttctcactggcatagatttcgatgacagtttcaactctgatgttgagaagcaatctgtg
aagatggccacccctgacaaaaatacaactatttctcattgcaaggaaatttgccaagta
acaaccaccaaaattaaatctagtggggcatcatccagcaattcaacagagaaacccaaa
gaacatgttatccacagaagagtactttacattcccagttatagctctgaaaacatagct
gagcgttcctttggtttgttgacaaaaaccacaaacaagaaccatctactcgatatggat
acgaacaccagtggaatggagtgtgaaagcaaagatctccccaagttgggtgtgggtttt
aaaactgctggcggaaatgctatgatagtttcagagaagtgtctgagcaaagcaagggcc
ttgtttgcagattttgagggaaaaaactgtgcacccaagtgtgcagtaaagaatccggaa
caagttgaaacgtcacctgttcaatatagaggcgaagttgatacaaatgttgattcaaat
gtgacacattttcatggccctgaaaagaaagtagatctgaaggaaccacgtgatgaatac
attgacaagattaaagtggactttacacattctcacaaacatggggatggtggattccag
acagccagtggtaaaggagtgaccatctcggcaaaggcccttcaaaaagcaaatgcagtc
ttcaaagactgtgacgctatggaaggtgcaggttgtgcatcagaaaagctgagcaaaaca
agtgttgtatcagagactggcagtaataattttgagagaaacaattgtggcttcagcact
gctcgagggaagagagttgatgtttctgcaaaatctctactgaaggcaaggactctcctg
aatgactgtgatgaattggacaattctaagccagggaaaatccccagcttgaatgcaaag
ataccaagtcagaatattccgcagaaaagtgactgtgattttaagaaacccagtagtaaa
gcagcctccatatcagcaaagatcccttttacagcagaaactccatttgatggtggcacg
tcacatgatgttctaggggcaaagagcaaaatgctcgaaccagagaattctcaaacccat
gccaaagatcctttgaaaaatggatgtggattcagtactgccagtggtaaaagagtgtct
gtgtccgaaggggcactgttgaaagcacaggctcttttgagtgaatgtcatgtagatgga
gaggaactttctaaaccaaagaaaaaaatcacagtagatcttcataccattcagaatcca
acacagaagcacagtggatttaagactgcaactgtctcagaagttaccgtatcacctaag
gtccataagcaagcaaaggctgttttcaacaactgcgattccaatatggacagcttaatc
agtgctgaagcaaagcaagggaatatagacgtaaagtcggcggatggtctgatgaacaat
ccagggaaaagctattgtgccttcatgacagctggtggaaagaatgtgcatgtatctgaa
aagggtattttgaaggcgaagagcattctgaatgaaaaccttgataactgcacagactca
aatgccattgaggaggcttggttttcagatggtagattttcgttactcactgaagatggt
acaggtgtcaaaaaaggagcagggaacaaatcaaattcttctgacctcaacgatgatgaa
aagagctgtgatttcagcactgccggtggcaggactgtgcatatgtccgatggagcactc
cagaaagcaaagtctattctgaacgaatgtgatgtaattgaaaatccacaacctgagaat
ggccacaaagtgcatctggaaaagattccaacaaaggaaacgcatgaaatctctcatggt
agcacagctagtgggaaaggggtgtttatttcagagaaggcacttcaagaagcatgtgag
gatacccttgccagtgatactgaccctcacaaaagatctgaagcaaataggccactgaag
gtccctactccccatattaatgttcagcgtgtgccggtcaaagcagtccgactggaggac
cgcgaagtgatccagaccattgttggaatggcatgtcagtcttcatctgtggaatgtcaa
gcggagtcttccttgttacattttgaatcccttggattcagtggctgctctgtgactcag
aggaggtactttgcccaggaggccatggattgtaccaaggctcttttagaggacgaagac
ttgaccgatcattgtcctggaacaccaatccaagctaaccccatgtcctgcaaggggggt
tttgagatgagaagtggaattgtgaaaaggtcggcagaggatttagggatgacagaccag
cctcctctgaaaagaagactcttgaccaaattcgacagaactgtggattgtagtagacgg
tcagaactcactccagctaaaagcagttcagatggtatatttaaagacaggagagtcttc
aaatataatgtggctcttcaacctaatgtcaccaggccatatcgcgctaaccagagatgt
gtagacacaaggctgaataagaccgagccacagaagacaacgtcagatccaaccgccgaa
gaccgtaaaccagttagctccaagacagctgtatttgtccccccattccggaagaatgtc
aagcttgagccacagaggagcagtggtcttaaggacaagactagagcacctggtgtgttt
gtttccccgtttcgaaaagacaaccgcgtaaccagggagggttcctttaagccttcagaa
gataatcattctcccttcatctctgaaatgccttccaagaccacatctgttccacttcct
gagtacaaccccatcactgacactggtagtgataacgcaaaggagtccattaaggaacag
gacccacaaaatattgacaaaacggacctaggcgatgatggtggccattgccttcctgtc
accctaggaggagaggatgccactgcagaggagtctattgcaggtcagctagcccctgac
ggtacccttctagacgttgtttatgatgcagagtgcttgcagctggcccgagacatgcag
gacatgagaatcaagaagaagaagcggcagaccattagacctctccctggcagcctgtac
ctggccaagacatctggggtggccaggctgaccctcagggaggctgttggaggtcggcac
ccggtacaacacacacacaaacagctgtatggctacggagtgcaccggcatgtttcggat
atcagcagtgagagtgccgaggcgttccgctttgtctgccgacacttcttcagacgcgag
gcgtttgtagaggggtgcattcagctggccgacgggggttggctcatccctcgcaacgat
ggaaccgcagggaaacatgagttccacagagcgttgtgtgacagccctggcgtggacccc
aagctgatcagtgaggcctgggtgttcaacaactaccgctgggtggtgtggaaacaggcc
tgcatggagagggcattcccagcagtgatgggcagcctctgtctcacaccagaacaggtg
ctcctacaactgaaatacaggtacgacttggaggtggacaacagcaagaggtccgctcta
aggaagatcatggagagagacgacacggcagtcaagaccatggtgctttgtgtatgtggt
gttgtcaccaaaggccataactcaacaaggcagagctggagtgagaccaagaccaaaaca
ccacccgggagcgccgcagggtctaaagcgacgtcgtccccagtaggcttgatctggctg
acggatggctggtacgccatcaaggcccagctggacgtcccactgaccgccatgctccgc
cggggccgcctggcgattggggggaaggtgctggtccacggggccgagctggtgggatct
caggatgcctgctccccactagaggctcccgactccctcatgctgaagattagggccaac
ggcaccagagtggcgcgttggtacaccaggctagggttctacagcaaccctagtccgttc
ctcctccccctctcctccctctacagcaacggaggccccgtgggctgtgtggacattgtg
gtgctgaggagctaccctacccagtggatggagaagaagtcggacggagggtttgcgttc
cgcgcaggccgtgcagaggagagggaggcgcggcgtcacggggacgccaaacacaaagcc
atggagatcctgttcgccaagatccaggcccagtttgagaaggaggacgtttgcggtaaa
cccagaggccggagacggaccctgcgtggtcgagacattgagacactgctggacggggag
gagctgtacgacgcggtggagaatgacccagtttatctggagggccgtctgagtgagcag
caacgggaggcgttgaacagctataggcgttgtgttggtgagaggaggcaagcggcactg
caggagcggttccgccaggctctggaaagcacccaggagggcgagggcgggagctgtcac
aaccgagacgtgacccccatctggaagctcagcgtcgctgactccagggccaagccgggc
agcaatgcagtgtacctgttgaatatctggcgcccctccatggatctgcagtccttgctg
aaggagggctgtcgatacaaggcctacaaactatccacgtcggagggcaagaaacgggcc
ggtaacacctccattcagctcaccgccaccaagaaaacccagttccagaatttacaggct
tctgcagggtggttgtctgagcgtttccaagcccgagaggcggttggctttcgcgttctc
ctgaaccgggacttaaagccgctctgtggagaggtggatctggtaggctacgtcatctcc
atcacagacagacaaggtcactctccagtggtgtatctagtggatggctggctggacttt
gtcaaggtgcgctgctgcagcagtctggtccagcagggcttggaggaggtggtcaagcct
ctggctctggtggctctcagtaaccttcagctccgagcccatccctcctcccccacccct
atccgcagcgccatccctggcctatacgctggagaactggtctcgttttccaccaacccc
aaggagccacatctacaggaggctgccactcaactcagaacccttgtccagggccaggaa
cacttcttcaggactgcagaggagaggttatctaacttagtccaggggtctgcccagtgt
cttcctccgccgccatggactccaggctggaaagcagatgccaaaccagatgccaggact
actatgacaccccagcagtcagttcgaagcgttggccccttcacccccctgaacagggtc
gtcccccctccacccgcctgctcctccgggggggacaacaaagaccccaagagcctgaaa
agaaagaggtgcctggagtacctgtgtcgtgtcccctctccccctccactctgccccttg
ggcaccatgaccttaccctcgccgtccgtcaacaagaccttcaacacacctcgcaggacc
gagacccaccggatcctaaagacacctttggcccccgctccacagcatgtccacctgccc
ctagaggatgagtgggtggaggatgaagagctggtcatgattgacactcaggccctacac
gatggcatagggatagacacgtga
DBGET
integrated database retrieval system
