Salvelinus sp. IW2-2015 (Arctic char): 111960642
Help
Entry
111960642 CDS
T05762
Name
(RefSeq) claudin-19 isoform X1
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecules
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111960642
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111960642
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111960642
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111960642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111960642
04147 Exosome [BR:
salp04147
]
111960642
04515 Cell adhesion molecules [BR:
salp04515
]
111960642
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111960642
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111960642
Exosomal proteins of colorectal cancer cells
111960642
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
L1 family
111960642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
111960642
NCBI-ProteinID:
XP_023838514
LinkDB
All DBs
Position
LG4p:complement(18028583..18042428)
Genome browser
AA seq
234 aa
AA seq
DB search
MLLAFQVLGLSLGVIGWCLENSCTNSHSWRVRSHSGAVTTSNWQFEGLWMSCAATSLGSV
QCQRYKTVLGLPGYIQACRALMIIALLLGLASIIVSVLGLKCTKIGSTSQQVKGKITLTG
GSLFILSGLSTLTAVSWYTARVVQEFHDPFFAGVRFELGTGLYMGWGAACLAILGGVMLC
CYGREVHQHHQQGDIHTTTPKQAVYNRSTGKHLCQSLGIQKLMFKAVSNVFCFF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcttttagccttccaggtcctgggtctgtctttaggggtgattggctggtgtctggag
aacagctgcactaattcccattcctggagggtacgcagccattctggggctgtcacaacc
agcaactggcagttcgagggcttgtggatgtcctgcgcagccacgtccctgggctctgtg
cagtgccagaggtacaagactgtactggggctaccaggctacatacaggcatgtcgagcc
ctgatgatcatcgctctgctcctgggtctagcgtccatcattgtctcagtgctggggctg
aaatgcacaaagatcggcagcacttctcaacaggtcaagggcaaaatcactctgaccggc
ggcagcttgttcatcttatcaggtctttccaccttgactgctgtgtcatggtacactgca
cgggtggtgcaggagttccatgatccattttttgcaggagtaaggtttgagctgggtaca
ggtctatacatgggctggggagctgcctgtctggccattctaggtggggtcatgctctgc
tgttatggaagagaggtccatcagcaccaccaacagggggatattcatacaactactcca
aaacaagccgtgtacaacagatctacagggaagcacctgtgtcagagtctgggaattcaa
aagcttatgtttaaagcagtttcaaatgttttttgttttttttaa
DBGET
integrated database retrieval system