Salvelinus sp. IW2-2015 (Arctic char): 111960692
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Entry
111960692 CDS
T05762
Name
(RefSeq) peroxisome assembly factor 2
KO
K13339
peroxin-6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111960692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960692
Membrane trafficking [BR:
salp04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
111960692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
AAA_22
ABC_tran
AAA_5
DUF815
RuvB_N
nSTAND3
RNA_helicase
TIP49
TsaE
Mg_chelatase
AAA_7
NPHP3_N
AAA_28
Vps4_C
AAA_25
AAA_24
AAA_14
AAA_2
IstB_IS21
AAA_17
Parvo_NS1
Wza_C
Motif
Other DBs
NCBI-GeneID:
111960692
NCBI-ProteinID:
XP_023838617
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Position
LG1:complement(9578401..9594119)
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AA seq
1089 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVIKSQFRYAFPSCNEPTSTLLFTSRKLQTLGKTAVLL
CAHSTEETSGCGADGNDTTLKLYTSKIFLKHYGLQDDIRGVVRPLSPFSLGKVVIGARTR
QSFKWANSDKFSNGLLILASCQGQPLLARQGDSLSLPYHPLLGDDISQVQHSLFDLVVLE
CTPLTQGMITINTTVVVTDCRDIAQHGALETSNPLATRNLTSLFVSDFAHYANSLGGGSS
LLDNRQVLDSSLSVFLQALECRLDVRIVDIRRLYGQGRIVLVEKRDAKIDFDSTVFVSKQ
LLLKLGLFNREWVVVSRFNCSSEMTKTSYRGESLPSPGQADDDAPGKEPSKGTEMVHLGS
VVVADFSKCAELDLHDNVGFISPTHWFNLSNGEPVPVSSRAVKIKRWNRVVSQSGLQLSE
SLSRSASPLLAKELHIDAVISPEYSSHGPFDSILCEHFTIPRLVQLGGVLGIPSEGHPEV
LESNSEGITRWPVVYFKVKKVCGSTEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVGEE
PSLWTSLSPPGLSSTVDQFSTIIQPHMNESSAALMSGCTILLLGPSGSGKFTSVRAVCRR
LHLHLVKVDCVTLCADTAAACEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGTEEDAR
VIDALCQFIAHSPASVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLASLSEG
MPLGRDVNLARLAKNTAGFLLGDLSALLTQAGKSAHGRILQSCFPEGGSVQEEEDLCACG
VTILAQDFTNALETLQDAHSQAIGAPKIPSVRWQDIGGLQQVKREILDTVQLPLERPELL
SLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSK
ARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRP
DLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDVVERCPPQLTG
ADIYALCSDAMMSAIKRKIARVTDGLDTEDTPLILSAEDFNQALDCLKPSVSEQELLKYK
LIQQKLTAK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtagaactgtcatgtttagatacatttccaacccacttaaatcctttg
cacgtgcttgttatcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttattcacatcacggaagcttcaaacactcgggaaaactgccgttttgctc
tgcgcgcactcaacagaggagacgtcaggttgtggggcggatggaaacgacacaacttta
aaactgtacacaagtaagatctttctcaaacactatggtctccaggatgatataagggga
gttgtacgcccactgtcaccgttttcccttggaaaagttgttataggggcacgaacaaga
cagagtttcaagtgggcaaactcggataagttttccaatggacttctcatactggcttcg
tgccaaggtcaacccctattggcacgacaaggggactcgctatcacttccctatcaccct
ttacttggagatgatatatctcaagtgcaacactctctgttcgatttagttgtgttggag
tgtacacctctaacgcaggggatgataacaatcaacacaacagtggtggtcaccgactgc
agagacattgcgcaacatggtgcactggagacgtcgaatcctttggctactagaaatttg
acctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagctct
ttacttgacaacaggcaagtattggactcgagtttatccgtttttttgcaagcactggag
tgtaggctggatgtcagaatcgtggatattcgtcgcttgtacggtcaagggagaattgta
ctagtggagaagcgcgatgctaaaatcgattttgacagtactgttttcgtaagcaaacag
ttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctaggtttaactgc
tcatcagaaatgacaaagacgtcctacagaggcgaatccctgccaagtcccgggcaagcc
gatgatgacgcacctggcaaagagccatctaagggcaccgaaatggtccatctcggctcg
gttgttgtggcagatttcagcaagtgtgcagagttggaccttcatgacaacgttggcttc
atatcgccgactcattggttcaacttgtcaaacggagagccagtgccagtcagtagcaga
gctgtgaagataaagagatggaaccgggtcgtttctcagtcaggtcttcagctttctgag
agcctctctcgatcagcatcaccgctgttagccaaagaactccatattgatgctgtcatc
tccccagaatacagttctcatggtccctttgacagtatcctctgtgagcactttaccata
ccaagacttgtgcagctgggcggtgttttgggcatcccatctgaagggcatcctgaagtc
ttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaaaag
gtttgtggctctacagaggaggaagaccaaggtccttaccttgcagacaccgtccacaca
tctctatacatgggcggctccaccaatagcctggctccctgttctcttgttggtgaggag
ccttccctctggactagcctgtctccccctgggctctccagcaccgtggaccaattctcc
actatcatccagccccacatgaatgaaagctctgctgctctgatgagtggctgcaccatc
ctcctcctgggaccgagtggcagtggcaaattcacctctgtcagagctgtatgccgtaga
ctccatctgcacttagtgaaggtggactgcgtgaccctctgcgccgacacggccgccgcc
tgcgaggcgaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgcattctg
ctgctcaggaacctgcagctgctgggccagcccagggatggcaccgaggaggatgccagg
gtcatagacgccctgtgccagttcattgcccactcccctgccagcgtggtcgtggtggca
gcggtgagtaaaccccgggagctgtcgtctgatgtgatggcagcctttatccaccaggtg
tcgatagagagccccagtgaggagcagcgccgggccatgctggccagcctcagcgagggc
atgcccctggggagggacgtcaacctggccaggctggccaagaacactgcgggctttcta
ttgggggacctcagtgcactgctgactcaggctggtaaatcagcccacggaaggatactg
caatcctgtttcccagaggggggcagtgtgcaggaggaagaggacctctgtgcctgtggg
gtaaccatcctggcccaggacttcaccaatgccttggagaccctccaagacgcccactct
caggccatcggagccccgaagatccccagtgtgcgctggcaggacattggcggcctgcag
caggtgaagcgggagatcctggacacggtgcagctgcccctggagaggcccgagctgctg
tccctgggcctgcgccgcgccggcttgctcctctacgggcctcccggcacgggcaagacc
ctgctggccaaggctgtggctaccgagtgctccatgaccttcctcagtgtcaaaggcccg
gaactcattaacatgtacgtgggtcaaagcgaggagaacgtgagagaggtgttctccaaa
gctcgagcggcggccccttgtatcatcttctttgacgagctggactctctagcgcccaac
agagggcgcagtggagactctggtggagtcatggacagggtggtctctcagctcctggct
gagcttgacggacttcactcctctggggacgtgtttgtgattggagccaccaaccggcca
gacctgctcgatcaatcactgctcagacctggcaggtttgacaaattggtgtatgttggg
atcaatgaagacaaagagtctcagctgcaagttctgaaggccatagtcagaaagttcaag
gtggaccccagcgtcagtctccaggatgtagtggaacgctgccctcctcagctcacaggg
gcggacatatatgctctctgctccgacgccatgatgtctgccattaagaggaagattgca
cgtgtcaccgatggtctggacaccgaggatactcctctcatactctctgccgaagacttt
aaccaagcattggattgcctcaaaccgtccgtctctgaacaagagctgctcaaatataaa
ctcattcagcagaaactcactgcaaaataa
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