Salvelinus sp. IW2-2015 (Arctic char): 111960753
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Entry
111960753 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111960753
03012 Translation factors [BR:
salp03012
]
111960753
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111960753
mRNA cycle factors
Stress granule specific factors
111960753
Translation factors [BR:
salp03012
]
Eukaryotic type
Initiation factors
eIF-4
111960753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
Motif
Other DBs
NCBI-GeneID:
111960753
NCBI-ProteinID:
XP_023838722
LinkDB
All DBs
Position
LG4p:complement(25354834..25417118)
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AA seq
1690 aa
AA seq
DB search
MNKAAQSLTRPHPAPSPGLQLPTFPPGQPPSVVFATPPPQMNPAPQPRQFAPVPRALHQQ
GGFRSLQAYYSRPSLPSNASRVPPGNTPRPVAPTHVYQPGQQMMMIPSQQIPFPNQQGPA
YFIPGQYRSTYVATPQQYPVPPGTPGFYPGTSPAEYGTYAGAYYPAQQQYTPSVPAAPVI
MNPPPQQQQLPPQQQIQPKRERKQIIIRDPNQGGKDITEEIMSGGTRSGTTPTPPQMSDD
SSESSGSEGPAVAQANGENVTPVVVRPDDRGKPAATLITGPPALSKTSELVKTAPAPTEV
KLPDTDCKSPSLPQDLPTPPRVTTTLHTTAPGTPPPSTSPIADMMDAPAPAAAPALSAPK
VPAYPAPLPEPRPTPAAEEQPSAAKDTREEVKKKKEEIKEVTEARAVTTSSKPEPSLAPV
TNPSSSTNGVSATQPLPEEEPSALSITMPSPQAAKPPLESPIAQPEELRLPNGLPLPSPQ
DPEKVSAESSECDLSPIAEPEVTPLQREAPASVAATVTPDPVVQATVAPVVLAETASTTE
VTPHQMEDEMDSPPSQRTTPPGANSMQAAVSVPKKKRKMKDLNIKEAVGDLLDAFKEEQV
VQSPPEQATPTSASDTEEPRPPPPLPSQEDETWRSXEDKLDAENIEPKPGNLKYQYKEEL
CRPIDPEEKKRYDRDFLLGFQFISAAMSKPEGLPQISDVVLDKANKAPLRQLDPSRLPGM
NMGTDFTPSFANLGRPGMGGGGGGGHRGGPPSGMGGGGPRRSQQGQRKEPRRIINISSSL
TDDVKLNKAEDAWKPAVKKAASGQAAPEEESDDPEQAKTQELFKRVRSILNKLTPQMFQQ
LMKQVKELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPEVTVN
FRKLLLNRCQKEFEKDKDDDVIFEKKQKELDAAAMEEKDRLKAELEEAKNMARRRSLGNI
KFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYF
VQMDKIIKEKKTSSRIRFMLQDVLDLRRNTWVPRRGEQGPKTIDQIHKEAELEEHREVLK
VQQQLLNQNTRGGGGGRGGGGGGGRDQGNRGGQHPQAGQRSQPQDEGWNTVPISTKSRPI
DTSRLSKITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAGEATPESGGRPA
TSTLNRFSALQPQQPSSGPSQDSDRRVPLRNSSSRDRGSNDRFDRRDDRDRNRHPVTKRS
FSRETEEHSREREHRGPSDPIRRVASMTDDRGSRDRGSRDRARSKENVKREAAATPPTQT
KPSLTEEELEKKATAIIEEYLHINDMKEALQCVVEMNSTQLLFVFVRSGLESTLERSPIA
RERTGLLLHQLYKAGTLPTEQYYRGLQEILEVAEDMAIDIPHIWLYLAELITPMLHEGGI
PMGPLFKEISKPLVPQGTAGVLLVXILTLLCRGMSRKKAGTMWREAGLSWKDFLPEDEDV
NKFVTEKNVEFTLGGEGDETEKSSKKELSSEELNKQLDRLIQDRADNQRIYDWVEANLDE
TQISSNVFVRAVMTAICQSAILCENPYKLDAKVITRRAKLLHKYLKDEQKELQALYALQA
LMVEMEQPANLLRMFFDTLYDEDVIKEDAFYKWESSKDPAEMQGKGVALKSVTAFFTWLR
EAEDEESDNS
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagcacagtctttaacgcgaccccaccctgccccctcccccggactccag
ctacccacgttccctcctggacagcccccctctgttgtctttgccaccccacctccacaa
atgaacccagcgccacagccccgacagttcgcccccgtgccccgtgctttacaccaacag
ggaggattcaggtcactgcaggcgtactacagccgtcccagtctgcccagcaatgcctcc
cgggtgccccccggcaacacgccgaggcccgtggcgcccacacacgtctaccagccgggc
caacagatgatgatgatcccctcacagcagatccccttccccaaccaacaaggccccgcc
tacttcatacccggacagtaccggtcaacgtacgtggccaccccccagcagtacccggtc
ccgccgggcaccccaggcttctacccaggcaccagcccagctgaatatggtacttatgca
ggggcatactacccagcccaacagcagtacacgccctctgtgccggctgctccggttatc
atgaaccctccaccccagcagcagcaactacctccacagcaacagatccagcccaaaagg
gagcgcaaacagatcataatacgagaccctaaccagggtggtaaagacatcactgaggag
attatgtcagggggcactcgcagtggcaccacccccacacccccacagatgagcgacgac
tcttcagagtcatctggatcagagggcccagccgttgcccaggccaacggtgaaaacgtg
acacctgtcgtggtcagaccagatgacagagggaaacctgcagccacactcatcactggc
cccccagccctgtctaaaacctctgaactggtcaagactgcccctgcccctacagaggtc
aaactcccagacacggactgtaaatccccttccttaccccaggacctacccacacccccg
cgggtaactaccaccctccacactactgcccctggtacccccccaccctcaactagtccc
attgcagacatgatggacgcaccagccccrgccgctgctccagccctatctgcccctaaa
gtgcctgcttaccctgcacccctgccygaaccccgccccactcctgcagccgaggagcag
ccctcagccgccaaggatacgcgggaggaggtgaagaagaagaaagaggagattaaagag
gtgacggaggctagagcagtgactacatcatctaaacctgagccttcccttgctccagtg
accaaccctagcagcagcactaacggtgtgtctgccacccagccactcccagaggaggag
ccatcagccctgtccatcaccatgccctctccccaggcagcaaaacccccgctggagtct
cccatcgcccagccagaggagctccggctgcccaacggcctgccgctccctagcccccag
gaccctgagaaggtttctgcagagtcgtctgagtgtgacctcagccccatcgctgagcct
gaggtgaccccattacagagggaggcacccgcgtctgtcgccgccacggtcacgcccgac
cccgttgtccaggcgaccgttgcccccgtggtcctagctgagactgctagtactacagag
gtaacccctcaccaaatggaagacgagatggactctccaccatcacagcgcaccacccca
cccggggcgaattctatgcaagctgctgtttctgtgcctaagaagaagaggaagatgaag
gatctgaacataaaggaggctgttggagacctcctggatgcctttaaggaggagcaggta
gtgcagagcccgccagagcaggccacacccacttctgcctctgacaccgaggagccccgc
ccaccgccacccctgccgtcgcaggaggatgagacgtggaggagcnaggaggacaaactg
gatgcagagaacattgaacccaagccggggaatctgaagtaccagtacaaagaggaacta
tgtaggcctatagacccagaggagaagaagaggtatgacagggacttcctgctgggcttc
cagttcatcagtgctgccatgtccaagcctgagggcctgcctcagatcagtgatgtggtg
ctggacaaggcgaataaggcccctctccgccagttggaccccagccgtttgccggggatg
aacatgggcactgacttcacgccctcatttgccaacctgggcagacctggaatgggggga
ggaggagggggtggacacagaggaggaccaccctctggtatgggtggtggaggaccgcgt
cgctcccagcagggccagcgtaaggagcccaggaggatcatcaacatctcttcgtctctg
acggacgacgtgaagctcaacaaggctgaggatgcctggaagcccgctgtcaagaaggct
gccagtgggcaagctgctcctgaggaggagagcgacgacccagaacaggccaagacccag
gagctgtttaagagggtccgtagtatcctgaacaagctgacccctcagatgttccaacag
ctgatgaagcaggtcaaggagytgaccatcgatacggaggagaggctgaagggagtgata
gatctgatctttgagaaagccatttctgaacccaacttctccgtggcctacgccaacatg
tgccgctgccttatggggctcaaagtccccactacagacaagccggaagtcactgtgaat
ttccgcaagctgcttctgaaccgctgtcagaaggagtttgagaaggacaaggacgatgat
gtcatctttgagaaaaagcaaaaagagctggacgctgcagccatggaggagaaggatcgc
ctgaaggcggagttggaggaggccaaaaacatggcacggcggcggtcgctaggcaacata
aagttcatcggtgagctgttcaagctcaagatgctgacggaggccatcatgcacgactgc
atcgtcaagctgctgaagaaccatgatgaggagtcactagagtgcctctgtagactcttg
tcaactatagggaaggacctggactttgaaaaggcgaagcctcgtatggaccagtacttt
gtccagatggacaagatcatcaaggagaagaagacatcgtccagaatccgcttcatgctg
caggacgtactggacctcaggaggaatacgtgggtccccaggagaggagagcagggcccc
aagaccatagaccagatccacaaggaggcagagctggaggagcacagggaggttctcaag
gtgcagcagcaactcctcaaccagaacacccgaggaggaggtggaggacgtggtggtggt
ggtggaggaggaagagatcaggggaaccgcgggggtcaacacccccaggcgggccagagg
agtcagccccaggacgagggctggaacacagttcccatctccaccaagagcagacccatc
gacaccagccgactcagcaagatcactaagcctggggctttggacttcaacaaccagctg
ctggctccccagctcgggggtaagggcatgtggggcagttggggcaagggcagcagtgga
ggcaccaccggagccaaacccgccggggaagccaccccagagtcaggaggccgcccagcc
accagcacccttaacaggttctcagccctgcagccacagcagccctcctcaggtccctca
caggactcggacagaagagttcctctaaggaacagctccagccgggaccgtggcagcaac
gaccgcttcgaccggcgggacgaccgggacaggaaccggcacccggtcaccaagcggagc
tttagcagggagacggaggagcacagcagagagagggagcaccgcggcccttctgatccc
atacgccgcgtagccagcatgaccgacgaccggggcagcagagaccggggcagcagagac
cgagctaggagcaaagagaatgtgaagagggaagctgctgcaacacctcctacccagacc
aaaccttccttgacggaagaagagctggagaagaaggccacagctatcatagaggagtac
ctacacatcaatgacatgaaggaggcgctgcagtgtgtagtggagatgaacagcacccag
ctgctctttgtgtttgtacggagcggtctggagtctactctggagcgcagccccatcgcc
agagaacgcacaggcctgctgctgcaccagctgtacaaggcaggcaccctgcccacagag
cagtactacagagggcttcaggagatactggaggtggcggaggacatggccatagacatc
ccccacatctggctctacctggctgagctcatcacccctatgctccacgaaggaggcatc
cccatgggaccgctcttcaaggagatatccaagcccctggttcctcaggggacggctgga
gttctgctggtccwgatcctcaccctactctgcagaggaatgagccgtaaaaaggcaggc
accatgtggagggaggcggggcttagctggaaagactttctacctgaggacgaggacgtc
aacaagtttgtgacagaaaagaatgtggagttcaccctgggaggagaaggtgatgagaca
gagaagagcagtaagaaggagctgagctcagaggagctgaacaaacagctggacagactc
atacaggacagggctgacaaccagaggatctacgattgggtcgaggctaacctggacgag
acacagatatcctccaacgtgtttgtcagagcagtcatgacagccatctgccagtcggcc
atcctgtgtgagaacccttacaagttggatgcaaaggtgatcacccggagggccaagctg
ctccacaagtacctgaaggatgagcagaaggagctgcaggctctctacgccttgcaggcc
ctcatggtggagatggagcagcctgccaacctgctgcggatgttctttgacacgctgtac
gacgaagatgtgatcaaagaggacgccttctacaagtgggagtccagcaaggaccccgct
gagatgcagggcaagggtgtggcactgaagtcagtcactgccttctttacctggctccgt
gaggccgaggacgaggagtctgacaacagctag
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integrated database retrieval system
