Salvelinus sp. IW2-2015 (Arctic char): 111960760
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Entry
111960760 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111960760
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
salp01007
]
111960760
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salp03016
]
111960760
Enzymes [BR:
salp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
111960760
Amino acid related enzymes [BR:
salp01007
]
Aminoacyl-tRNA synthetase
Class II (U)
111960760
Transfer RNA biogenesis [BR:
salp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111960760
Prokaryotic type
111960760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
DUF383
Motif
Other DBs
NCBI-GeneID:
111960760
NCBI-ProteinID:
XP_023838732
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Position
LG4p:25635268..25646829
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AA seq
589 aa
AA seq
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MPTVSVKRDLLFHALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQKMEAPRYRRVSPASSEPQRLVITEETTVVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNVCRKRTLVAIGTHDLDTISGPFTYTAKPPG
DIRFKPLNQAKEYTAQELMILYKTDSHLRHYLHIIEDEAVYPVIYDSNGIVLSMPPIING
DHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEEAEVVYPDGRTCQY
PELAYRKETLSADFIXRKVGISESTEHIAQLLTKMCLRSEVMSDGEQIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNIPRTTPRTYTVANQLPLNKLSELLRQDLAAAGFTEALTFALCS
QEDIADKLLKNISETRACHISNPKTAEFQVARTTLLSGLLKTVAANRKMPLPLRLFEISD
VVLKDETKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEVKPGQGNGYHIQAADD
STFFPGRCAEIFARGKSIGRLGVLHPDVINRFELTMPCSALDIDIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcagtgtcaaaagggatcttctgtttcatgcattgggcagaacatacact
gatgaagaatttgatgagttgtgttttgagtttgggctggagctcgatgagattacctca
gagaaggacatcatcagtcgtgagcagggggacaccaaggcagagggggcgtctgatgtg
attctgtataagatcgatgtcccagctaaccgctatgacctgctgtgtctggaagggctg
gtcaggggcctgcaggtcttcaagcagaagatggaagcccctcgctacaggcgtgtgagt
ccagccagcagtgagcctcagaggctggtcatcacagaggagacaactgttgtgcgaccc
cacgctgtggctgcagtcctgaggaacatcaccttcacacaggaacgctacgacagcttt
atcgaactacaggaaaaactccatcagaacgtctgtaggaaaaggactctggttgccatc
ggcacccatgacctggacaccatttcaggccccttcacctacacagccaaaccacctggt
gacatccgcttcaaacctctcaaccaggcaaaggagtacaccgcacaggaactcatgatt
ctctacaagacagacagccacttgcgacactatctgcacatcattgaagacgaggctgta
tatcctgtcatctatgacagcaacggcattgtactgtctatgcctccaatcatcaatggg
gaccattccaaaatctccttgaatacaaagaatgtttttatcgagtgcacagccactgat
cttaccaaggcaaaaattgtgttggacatgatggtgacgatgttctgcgagtattgtgaa
gagcctttcacggtagaagaggctgaggtggtgtacccagacggaaggacctgtcagtac
ccggagctggcttacaggaaggaaactctgtcagctgacttcatcnaccgcaaagttggc
atcagtgagtcgactgagcatatcgctcaacttttgaccaagatgtgcttgcgctcagag
gtcatgagtgacggcgaacagatcgaggtggagatcccgcccacgcgctctgacgtcatc
cacgcctgtgacatcatggaggacgctgccatggcatacggtttcaacaatattccccgc
accacgccgcgcacatataccgtagccaatcagctcccacttaataagctgtcagagctg
ctgagacaggacctggctgctgctggattcacggaggccctcaccttcgccctgtgttct
caggaggacatagctgacaagctgttgaagaacatctcagagaccagagcatgtcacatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccctgctctcaggcctgctg
aagactgttgctgccaacaggaagatgcctctgcctctgaggctgtttgagatttcagac
gtggtgctcaaggatgaaaccaaagacgtgggggccaggaacaaccgtcgcctttgtgct
gtctactacaacaagagtccggggtttgaggtgatccacggtctgatggacagggtcatg
cagctgctggaggtcaaaccaggccagggcaatggctaccacatccaggctgctgacgat
tccaccttcttccctggtcgctgtgctgagatctttgcgcgcgggaagagcataggacgc
ctcggggtccttcaccctgatgtcatcaaccgctttgagctcaccatgccatgctccgcc
ctggacatcgacatcgagcccttcctgtga
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