Salvelinus sp. IW2-2015 (Arctic char): 111960913
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Entry
111960913 CDS
T05762
Name
(RefSeq) DENN domain-containing protein 1A
KO
K20160
DENN domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960913
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111960913
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
Motif
Other DBs
NCBI-GeneID:
111960913
NCBI-ProteinID:
XP_023838842
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Position
LG4q.1:29:complement(34414180..34547110)
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AA seq
1107 aa
AA seq
DB search
MGSRIKDNPEATFEVYLEVTHPGTTGADPEVRRRFPEDYIDQETLQTVPKFCFPFSVDSL
SVSQVGQNFTFVLTDIESKQRFGFCRLSSGAHSCYCILSYLPWFEVFYKLLNILADYTIK
GQESQWRELLESLHTLPIPDPGVPVHLSVHSYFTVPDTRELPSIPENRNLTEYFVAVDVN
NMLHLYASMLYERRILICCSKLSTLTACVHGSAAMMYPMYWQHVYIPVLPQHLIDYCCAP
MPYLIGVHSSLMEKVKGMALDDVVVLNVDTNTLETPFDDLQSLPNDVVSSLKNRLKKVST
TTGDGVARAFLKTQAALFGCYRNALQIQPGEPITFSEEVFVTHRSSAMRQFLQNAIQLQL
FKQFIDGRLDLLNAGEGFSDVFEDEINMGEYAGSDKNYHQWLFTVKKGGGAIFNTVRTKA
NPAMKTVYKFAKDHARMGIKEVKSRLKQKELAENGYSSTVGTGGTGTGTGEEGTTAGSPT
STDGKDGSARTWDERRPITVHFGQVGERNRRDEKGELAENGYSSTVGTGGTGTGTGEEGT
TAGSPTSTDGKDGSARTWDERRPITVHFGQSLAALSLLCVGYGISLYLSFLFYLCHSLSL
SFSLCLCLSTSPSGGRPTRHYTVFLSEDSSGDELQHEDDSIASFPENFLFSAPFEWSPLP
PPYRSLKEAEGGEEPISGPSYTAPPSPVMEKFADINLLGNMFSCLDEPEGQQLSLAKSLE
DLRTPKDPQEQQKLIYQRMDLSGTLPGLKHSNPYNKMWSMHGQDDMAMSGRVSPNWDRPL
SVPPPDLEELRPPSRESFGPGVLERPDLFITPSQGECITIPRPQGRKTPEPGKVLGPPPV
PQPRTKPGVVGDGGTTTAGGQEFRQALGMGGDLMLQPTKMDFNDGRDVDLLSLLDPLNNP
AQTTTTTPALAGEGADTRSSAEPPTSRPVLPPRPYPQSLPPFHQHMPLNPFTPPLGYSTH
RHYSPTVAGNPFGGGAYGPPASAYFHASPHGHPPHPLSTMPGLYRLSSPVGSTLPPGMGS
MRSAFPSHGGPPPTSSGSHHALSNLLDSPSVPTPSLATRVLPKPPNTAEDSNETQDPFGD
LLAMAKPAAAPPKKKVEGLRGKWETFD
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggggtcccgtatcaaggacaaccctgaggccactttcgaggtgtacctggaggtgacc
catcctggaacaactggcgctgatccggaggtgcggaggcgattccccgaggactacatc
gaccaggaaactcttcagacagtccccaagttctgcttccccttcagtgtggacagtctg
tcggtgagccaagtgggccagaacttcacctttgttctgacggacatcgagagcaagcag
cgcttcggcttctgccgcctctcctcgggggcccacagctgctactgcatcctcagctat
ctgccctggtttgaggtattctacaagctgctcaatatcctcgctgactacacaatcaaa
ggccaggagagtcagtggcgagagctcctggagtcactccatacactccccatccctgat
cctggagtgccagtccatcttagcgtgcattcctactttactgtgcctgacacaagggaa
ctacccagcatacctgaaaacagaaacctaacagagtattttgtagccgtagatgtcaat
aacatgctccatctgtacgctagtatgctttatgagcgtcgaatcctcatctgctgtagc
aaactaagcaccttaacggcttgtgttcacgggtcggcagccatgatgtacccaatgtat
tggcaacacgtttacattcctgtcctgcctcagcacctcatagactactgctgtgcgccc
atgccctacctcattggagtacattccagcctaatggagaaggtgaaggggatggccctg
gatgacgtagtagtcctcaacgtagacaccaacaccctagaaacaccctttgacgacctc
caaagcctgcccaacgacgtggtgtcatccttaaagaatcgcctgaagaaggtttccacg
acgacgggagatggcgtggcccgagctttcctcaagacacaggccgctctcttcggctgc
tacaggaacgcgctgcagatccaaccgggagagccaataacgttcagcgaggaggtcttt
gtgacccaccgctccagtgccatgagacagttcctgcagaacgccatccagctgcagctc
ttcaaacagttcatcgatggccgcttggacctgctgaacgctggtgagggcttcagtgat
gttttcgaggatgagatcaacatgggagagtatgcaggcagcgacaaaaactaccaccaa
tggctattcacagtaaagaaagggggcggtgctatctttaacacagtgaggaccaaggct
aatccggccatgaaaacagtctataagtttgctaaagatcatgccaggatggggataaag
gaagtcaagagccgactaaagcaaaaggagctggcagagaacggctactcctcgacagtg
ggcactggtggcacaggaacgggcaccggggaggagggcaccactgccgggtcgcccacc
tccacagacggaaaggacggcagcgcccgcacctgggacgaacggcggcctatcactgtg
cactttggacaggtgggtgagaggaacaggagggatgaaaagggggagctggcagagaac
ggctactcctcgacagtgggcactggtggcacaggaacgggcaccggggaggagggcacc
actgccgggtcgcccacctccacagacggaaaggacggcagcgcccgcacctgggacgaa
cggcggcctatcactgtgcactttggacagtctctcgctgctctctcgctgctctgtgtg
ggatatgggatatctctttatctctccttccttttctatctctgtcattccctttcactt
tctttctctctctgcctatgcttatctacctcccccagtggtggccgtcccacacgtcac
tacacagtctttctgtccgaggactcatcaggcgacgagctgcagcacgaagacgactcc
attgccagcttccccgagaactttctcttctctgcccccttcgaatggtcacccctgccg
cctccttaccgctccctgaaagaggcggaggggggggaggagcccatcagcggcccctcc
tacacagccccgcccagcccagtgatggagaagtttgctgatatcaacctgctggggaac
atgttcagctgcttggacgagcctgagggacagcaactcagcctggccaagagcctggag
gacctccgcacacccaaagacccccaggagcagcagaaattaatctaccagcggatggac
ctgagtggcacccttccaggcctcaagcactccaacccctacaacaagatgtggagcatg
catgggcaggatgatatggccatgtccggacgggtgtctccgaattgggaccgacccctg
tccgtgcccccccctgacctggaagagctgcggccccctagccgagagagcttcggtccc
ggggtcctcgagcggccagatctcttcatcacccccagccaaggggagtgcatcaccatc
ccccgcccccaggggaggaaaaccccagagccaggtaaggtcttgggtcctccaccagtg
ccccagccccggaccaagccgggggtagtgggggatggtgggaccactacagcagggggg
caggagttccggcaggcccttgggatggggggtgacctgatgctgcagcccaccaagatg
gacttcaatgacgggagggatgtggacctgctcagcctcctggaccccctgaacaacccg
gcccagaccaccaccaccaccccagccttggcaggggaaggagcagacacccggtccagt
gccgaacctccaacctccaggcctgttctcccgccacgtccctaccctcagagcctgccc
cccttccaccaacacatgcccctgaaccccttcaccccgcccctcggctactccacccac
agacactactcgcccaccgtagcagggaatcccttcggcggcggtgcctacgggcctccc
gcctccgcctatttccacgcctccccccatggtcaccctcctcaccctctttctacaatg
ccggggctctacagactgtcctcccccgtggggtctaccctccctcctggtatgggatcc
atgcggtctgccttccccagtcatggcggtcctccccccacctcctcaggcagccaccat
gctctctctaacctgttggactccccctcggtccccacccctagccttgccactagggta
ctgccaaagcctcccaacactgcagaggactccaacgagactcaggatccctttggggac
ctactggccatggctaagccggccgctgcaccacctaaaaagaaggtagagggccttcgg
gggaagtgggagacttttgactaa
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