Salvelinus sp. IW2-2015 (Arctic char): 111961036
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Entry
111961036 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-beta-2-like
KO
K27096
liprin-beta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111961036
Membrane trafficking [BR:
salp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111961036
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
FxsA
PUMA_CC
Fib_alpha
WHEP-TRS
DUF16
Motif
Other DBs
NCBI-GeneID:
111961036
NCBI-ProteinID:
XP_023838936
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All DBs
Position
LG4q.1:29:complement(83434418..83534635)
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AA seq
983 aa
AA seq
DB search
MASDASHMLEAALEQMDDIIAGSKASAEYTNGLFELGSPGSAGPLQVLQLVEDLRLALEL
QPREEERNTLRAQVPSSTAHMLMDWLDMDRGSDRGSVNLRSPVNNEXYQERLVRLEGDKE
SLVLQVSVLTDQVEAQGEKIRDLETSLEEHYHKLNSTEEMLQQSSVEGGRSKDQQNKAEC
VVNLISELQEQMCRFQEEIHTRIMEKRAMEAQGESGAREAHDQSPDVGLGGSDVEEFCCR
CGGQNGLLQELRLLKSKVDVLEGEKSQYERKLKATKVEIADLQQILASKDSEIEGLQSQL
VSRGPMTNENPERDQEFQRLKMGMESLLAANDEKDRHIEELTVLLRQYRKMKEVMALAQV
SSEKLLVGSSEEELSGSLKXRALTHKAHSDIILQSVLADCSMSSRCSSPLVRSSSSFQKE
LTSSIQTSLETSMVMVSPSDAGCFHNGQWSQPQMLSSSLEELQSGSLPKHVVGQPVEAFS
ENRHMEMNKYQTLPGKLSRPDLNEDQEQCATPVQLSPDDSEDSELNLRKSERLDESTQSD
LSPLSSGVDSGKQSPVSPENKKNHLGIKKLWGKIRRTQSGTLQREDLEPGEFKRGGLRAT
ASPRLARTGETLTSVWDLKTPFSKWTPEQVCCWLEESGLDQYVILARHWANSGQTLLSAS
PQDLEKEMGIKNPLHRKKLQLALKSFSTKMTEKSSELDHIWVTRWLDDIGLPQYKGQFHE
GRVDGRMIQYLTVNDLLFLKVTSQLHHLSVKCAIHVLHVNKFNPNCLKRRPGDENKTSPS
EVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLL
RRHLATNFNMLVGSQAQQEKREFMESSGYTPLSTTAKVRPKKLGFSNFGHLRKKRCDEST
DYICPLEAAQVQAVLNGAHRPYSGFRGLSPILDRDPDRREQMAVTEGPVLQIEALSEGIN
QLTYLLSRDEVLKEMRRPQTALV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgcaagtcacatgttggaggcggccttggagcaaatggatgacatcatc
gcaggctccaaggcttcagccgagtacaccaacggcctgtttgagctgggctccccaggt
agcgcagggcccctgcaggtgctgcagctggttgaggacctgaggctggccctggagctg
cagcccagagaggaggagaggaacaccctgagggcccaggtccccagcagcactgctcac
atgctcatggactggctggacatggacaggggctcagacaggggctcggttaaccttcgc
tccccggtgaacaatgagrgctatcaggagcgtctggttcgcctagagggggacaaagag
tctctggttctccaggtgagcgtgctcacagaccaggtggaggcycarggagagaagatc
cgagacctggagacctctctggaggagcactaccacaaactcaactccactgaggaaatg
ctacagcagagttcagtggaaggaggaagatctaaggaccagcagaacaaagctgagtgt
gtggtaaatctgataagcgagctccaggagcagatgtgtaggtttcaggaagagatccac
acccgcatcatggagaaacgggccatggaggcccagggggagagtggtgcccgcgaggcc
cacgaccagagccctgacgtgggcttgggtggctctgacgtggaggagttttgctgtcgc
tgtggaggacagaatggcttactgcaagaactcaggctcctcaagagtaaagtggatgtg
ctggagggggagaaatcgcagtatgagagaaaactaaaggccacgaaggtggagatagca
gacttacagcagatactggcttccaaagactctgagatcgagggccttcagagccagctg
gtctccagaggcccaatgaccaatgagaatccagagagagaccaagaattccaaaggttg
aaaatggggatggagtctttgttagcggcaaatgatgagaaagaccgtcacatagaggag
ctcactgttctcctgagacagtacaggaagatgaaggaggtgatggccctcgcacaagtg
tccagtgagaagctccttgttgggagcagtgaggaggaactgagcgggagtctgaagnat
agagctctcacacataaagctcattcagacatcatccttcagagtgtattagcagactgt
tcaatgtcttccaggtgctcctctcctcttgtaaggtcttcctcatccttccagaaagag
ctgacctctagtatccagacctccctggagacgtccatggtgatggtctccccgagcgat
gctggctgcttccacaacggacaatggtcccaaccacagatgctttcaagcagcctggag
gagttacaaagcggatcgttaccaaagcatgtagtgggtcaaccagttgaagcgttttca
gagaatcggcacatggaaatgaacaaatatcagaccctaccagggaagctatctcgaccg
gacttgaatgaggatcaagagcagtgtgccacaccagtccagctctcccctgacgatagt
gaggacagtgagttgaacttaagaaagtcggagagactggatgagtccacgcagtcggac
ctgtcccccctctcgtctggagtggactcaggaaagcagtctcctgtctccccagagaac
aagaagaaccacctgggcatcaagaaactctgggggaagattcggaggacccagtctggc
accctgcagagagaggaccttgagcctggagagtttaagagggggggactgagagccacc
gccagccctcgtctggcccggactggagagacgttgacctctgtgtgggatttgaagaca
cccttctccaagtggactccggagcaggtctgttgctggctagaggagagtgggctggac
cagtatgtgattctggcccgacattgggccaacagtgggcagaccctcctctccgcctca
ccacaggacttagagaaggaaatggggattaagaatccactgcacaggaaaaagttgcag
ttggccctcaagtccttcagcaccaaaatgactgagaaatcctctgaactggaccacata
tgggtcacacgttggcttgatgacattggtttacctcaatacaagggtcagtttcacgag
ggaagagtggacggcagaatgattcagtacttgacagtgaatgacctcttgttcctgaaa
gtgaccagtcagctccatcatctcagtgtgaagtgtgctatccacgtcctccacgtcaac
aagttcaaccccaactgcctaaagagaagacctggagatgagaacaagacttctccctca
gaggtggttcagtggtctaaccacagggtgatggagtggcttcgctcagtggacctggcg
gaatacgcacccaacctgaggggcagcggggttcacggtggcctcatcattctggagcct
cgttttaactcagataccctggccatgctgctgaacatcccccctcagaagaccctgctg
cgacgtcacctggccactaacttcaacatgctggtgggctcccaggctcagcaggagaag
agggagttcatggagtcgtctggctacactcccctcagcaccacagccaaagtcaggcca
aagaagttgggcttctcaaacttcggccacctaaggaagaagaggtgtgacgagtcaaca
gactacatttgccccctggaggcggcccaggtccaggcggtgctgaacggggcccaccgg
ccctactccggcttcaggggcctcagccccatcctagacagagacccagacagacgggag
cagatggcggtgacagaggggcccgtgctgcagatagaagctctgtctgagggaattaac
caactcacgtatttgcttagccgagatgaggttctgaaggagatgagacgccctcaaaca
gcactagtctga
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