Salvelinus sp. IW2-2015 (Arctic char): 111961044
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Entry
111961044 CDS
T05762
Name
(RefSeq) sal-like protein 1
KO
K19871
sal-like protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111961044
03036 Chromosome and associated proteins [BR:
salp03036
]
111961044
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111961044
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111961044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_2
zf-C2HC_2
zf-C2H2_15
zf-C2HE
DUF3939
Zf-C2H2_ZNF451_2nd
Motif
Other DBs
NCBI-GeneID:
111961044
NCBI-ProteinID:
XP_023838942
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All DBs
Position
LG4q.1:29:complement(85603808..85611022)
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AA seq
1300 aa
AA seq
DB search
MSRRKQAKPQHVQSDHNLALSERIGDTHDSLATPPILVSCTHVCSRCCAEFVELSDLELH
VRDCSPNQLVLIVNGNEDPVSSAEMFHLALSPRKAVEPGETVNNSEMEECGDLSEEKSEV
KEESMNVSRTKNSHCRLDSPSSISSSRKSSTDSMTDIVSCTSVLPISLPQPGSDLLEHQG
TFSWFNSNVIFENLESTKVAVAQFPQQSRSDTGSSGSSKMAVSSLMEQLLALQLHQIQQL
QLIDQIRHQVLLFASQRSEVSETLTQTRISCPQVSLASTQASQLTTLSSQLSQQLAAAAG
LAQSLASQSXSIGHFKRLTANVQLPQSPFGRSIVHSSTEPLQSICKHIASAVSKPHSRKK
YTPASGLYPQLHFSAQTIRNSPALGTGISLNRSNTPRLPQPPPSNQTLSSAGPSIGTIVQ
DLNALKALAEQRKGKPPNVTSFEPKSSSKEAFFKHKCRFCSKVFGSDSALQIHLRSHTGE
RPYKCNICGNRFSTRGNLKVHFQRHKERFPHIQMNPYPVPEHLDNIPTSTGIPYGMSMPP
EKTVTCWQDSKPSLATLTTSVGLLLQTGSPNLPFLIKKEEQPVSITAYSSPVVRDSSSAV
KSTKSVDLIEAGKVPTFPTMNLKTDNVIPPLTFSSKMSSTTERSADYVSANVTSISTNPI
KLEQFKTKHPFRGGVLDPMQTSETLKLQQLVENIDKKVTDPNECVICNRILSCQSALKMH
YITHTGERPFRCKVCGRAFSTKGNLKTHHAVHRTTPPLRVHHSCPICHRKFTNAVVLQQH
IRMHMGCQIPNTPLSEQNYPMSMESDGGSIDERKLEELENPSDDIDFNDSGIAXMSRFNN
SSSGSISSSPSDSTEAGSSDAERTTNYHRPVEEKQVNWLKSKGMAKEDQKVYDSSSLGGD
RSGRSLAVSENTVDKQSLSQSKSVPVCSSHTSFEEMYQKALSQAHITGTGPLVSLDHLKS
LNPLKDPTNMVYTFREQLGIFKNTECDICGKTFACQSALDIHYRSHTRERPFICTVCNRR
FSTKGNLKQHMLTHQMRDLPSQLFEPTTPSLASSPNNSVHPLSSQMIKTEVNSFLGSARY
GVPRDLLGSLSLRTSSASSSPALATPPPRRTPKQHYCHTCGKTFSSSSALQIHERTHTGE
KPFACTVCGRAFTTKGNLKVHMGTHMWCSTPTRRGRRLSVDGPLTFMGTHPVKLPEPPQR
PDIRSSNGDSFFIWNHCTDSFSKNLAMRTNDISVGGGPYLSGPMGHGASSPIGGVNVGRD
KFHHTEHNAALALPGKDDTKRATHFCFTRLIDERKEMITN
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaggaaacaagcaaagcctcaacatgtacagtcggatcataatttggcttta
tcggaacgcattggggatacacacgacagtttagcgactccccccattttggtctcttgt
actcatgtctgcagcagatgctgtgctgagtttgttgaactatcagatctggaactacat
gtcagggattgctctcccaatcagttagtcctgatcgtcaatggtaatgaagatccagtg
tcgtctgctgaaatgttccatctagccttgtcgcctcgtaaagcagtggaaccaggcgaa
acagtcaacaactctgaaatggaagagtgcggtgatctgtcggaggagaagtcagaagtg
aaggaagaatccatgaatgtttccagaactaagaatagccattgccggctagatagcccc
agtagcatcagtagcagccggaaaagcagtactgacagcatgactgacattgtttcatgt
acctcagttctcccaatttcactacctcaacctggcagcgatctgttggaacatcagggg
acattctcctggttcaacagcaatgtcatctttgaaaacctagagagcactaaagtggca
gtggcccagtttccccagcagagccgatcggacaccggcagcagtggcagcagtaagatg
gctgtctcatctctgatggaacaactcctggccttgcagctgcatcagatccaacagctg
cagctgattgatcagattcgtcaccaggtcttactatttgcttcccagaggtctgaggta
tcagagacactgacacaaacacgcatcagctgccctcaggttagtctagcatcaacgcag
gccagtcagttgacaaccctcagttcccaactctcccagcagctagctgcagctgctggg
ttagcccagagtctcgccagccagtctyccagcatcggacactttaaacgattaacagca
aatgtacaattaccacagagcccctttggaaggagtattgtgcactctagcactgaaccc
ttacaaagtatatgtaaacacatagcttcagcagttagcaagccccactctagaaagaag
tacactcctgctagcggtctgtaccctcaactacatttttcagcccaaaccataaggaac
tcaccggcacttggcacaggtatctcgcttaaccgatcaaatacaccacgtctacctcag
ccaccacccagcaatcaaacactctctagcgctggaccaagcattggcacaattgtgcag
gacctgaatgccttaaaggcgctagccgaacaaaggaaaggaaaaccacccaatgtgact
tctttcgaacccaaaagctcttccaaagaggctttctttaaacataaatgcaggttttgc
tctaaggtttttgggagtgacagtgccttacagatccatttgcgatcccacactggggag
aggccatacaagtgcaacatctgcgggaatcgtttctccacccgtgggaacttgaaggta
cacttccagcggcacaaagagaggttcccccatatccaaatgaacccttaccctgttcca
gaacacctggacaacatcccaaccagcacaggaatcccttatggcatgtctatgccacca
gaaaaaacagttacatgctggcaagatagtaaaccatccctagccaccttgactacttct
gtaggcctgttgctccaaactggatcacccaacttaccctttctcatcaagaaagaggag
cagcctgtttcaataactgcatattccagtccagttgtacgtgattcatctagtgcagta
aagtctaccaagagcgtagacttgatagaggctggaaaagtcccaacgttccccaccatg
aatctgaaaacagacaacgttatacctcccttgacctttagctcgaagatgagctccaca
acagaaagatcagctgactatgtatctgccaatgtcacttccatcagcacaaatcccatc
aagttggagcagttcaagaccaaacatcccttcagaggaggagtccttgatcccatgcag
acatcagagaccttgaaactccagcagctggttgagaacattgacaagaaggtgacagac
cccaatgagtgcgtcatttgcaaccgcatactcagttgtcagagcgccctcaagatgcac
tacatcacccacacaggagagcggcccttcagatgtaaagtgtgcggacgggcgttctcc
accaaagggaacctgaagacgcaccatgcggttcatcgcaccacaccgccactgagggtc
caccactcctgccctatctgccataggaagttcactaacgctgttgtccttcagcagcac
atccgcatgcatatgggttgccagattcccaacacccctctctctgaacagaactaccca
atgtcaatggagtctgatggaggttcaatagatgagaggaaattagaagagttggagaac
ccttctgatgatatagacttcaatgacagtgggatcgcagycatgtctaggtttaataac
tcctcgtccggcagcatatcttcctctccatctgatagtacagaagcaggctcctctgat
gccgaaaggacaactaactatcataggccagtggaggagaagcaggtcaactggcttaag
tcaaagggaatggctaaagaggatcagaaggtctatgactcgtcatctcttggaggtgac
cgaagtggtaggagccttgctgtttctgagaataccgttgacaagcagtctctttcccaa
agcaagagtgttccagtatgttctagccacacaagctttgaggaaatgtaccagaaagct
ttatcccaggcacatatcactggcactggtccactggtgtcccttgaccacctaaaatct
ttaaacccactgaaggatcctactaacatggtctacactttccgtgaacaactaggcata
ttcaagaacactgaatgtgatatttgtggtaagacctttgcctgccaaagtgccttggac
atccattatcgaagccataccagggagagaccatttatttgtacagtgtgcaacagaagg
ttttccaccaaggggaacctcaagcagcacatgctaacacatcagatgagggacctgcca
tcccagttgtttgagcccaccactcccagccttgcctccagccccaacaactctgtacat
cctctgagctcccaaatgatcaagacagaagtgaacagtttcctgggtagtgcccgctat
ggggtaccaagggatcttctaggcagtttgagtttgaggacgtcctctgcctcttcctcc
ccagcgcttgccaccccgccacctcgacggactcccaagcagcattactgccacacttgt
gggaaaaccttctcttcttctagtgccctgcaaatccacgagaggactcacactggggag
aagccatttgcctgcactgtctgtggtcgggcattcaccaccaaagggaatctgaaggtc
catatgggaactcacatgtggtgtagcacccccaccaggcgaggacgcagactgtctgtg
gacggaccattgacgtttatgggaactcatcctgtgaagctaccagagcctccccagagg
ccagacattaggtccagcaatggagactccttttttatctggaaccactgtacagactcc
ttctccaagaacttggccatgaggaccaatgatatctcagtcggaggtgggccttacctc
tctggaccaatggggcatggggccagctcacccatagggggcgtaaatgttggtcgggac
aaatttcaccatacagaacacaatgctgctcttgcgctgcctggtaaagatgataccaaa
agagcgactcacttctgtttcactcgtttgatagatgagaggaaggaaatgattacaaat
taa
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