Salvelinus sp. IW2-2015 (Arctic char): 111961209
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Entry
111961209 CDS
T05762
Name
(RefSeq) protein ERGIC-53 isoform X1
KO
K10080
lectin, mannose-binding 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111961209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111961209
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
salp04091
]
111961209
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
111961209
Lectins [BR:
salp04091
]
L-type lectins
111961209
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
Laminin_I
GCN5L1
RebB
Motif
Other DBs
NCBI-GeneID:
111961209
NCBI-ProteinID:
XP_023839057
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Position
LG4q.1:29:172554..201040
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AA seq
510 aa
AA seq
DB search
MAVSIGRCLAADACLLILTLTFHHSNADNIVAGASTEEAPHRRFEYKYSFKGPHLSQTDG
IIPFWVHSGNAIPSADQVRITPSLRSQKGSVWTKNTVNFDHWEAEVTFRVSGRGRMGADG
LAIWFTTAQGLDGPVYGAADNWIGIGVFFDSFDNDGKKNNPAVLVVGNNGKLVYDHPNDG
TTQALGTCLRDFRNKPYPVRAKITYYKKTLTVLINNGFTPDKDDYEFCTKVDNMVIPQEG
YFGISAATGGLAGDDHDVLSFLTFRLTEPGQELPAPEAEIPKEEQDKYQEEFEDFQQELD
KKKEDYQKEHPEVQREPIEDMYESVNDRDIRQVFEGQSQIHLEIKQLHRQMAMILDEQNR
YVSVVTDEISKRQGELVGQAPSQEMGAVVATQQEILRNLNELKNSFHESLKQIGATQHQA
NPVSMGTYETVQHFSEIQEHLHVVKRNIEHLITRNGSPSENQGEKCPDPPKMPSCLGTTH
FLVFVVIQSVLFFSYIMYKSQQEAAAKKFF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccataggaaggtgtctggctgctgatgcttgtttattaatattaacttta
acatttcaccacagtaatgccgataatatcgttgccggtgcatcgactgaagaagctcca
caccgtcgatttgaatacaagtacagtttcaagggaccacacctgtctcaaaccgacggg
attattcctttttgggtgcacagtggaaatgccatccccagtgccgaccaggtccgtatc
accccctctctcaggagtcagaagggctcagtctggaccaaaaacacggtcaactttgac
cactgggaggctgaggtgacctttcgtgtgtctggacgggggaggatgggagccgacggc
ctggcgatatggttcaccactgcacaaggcctagatggtcctgtctatggagccgctgac
aactggatcggcatcggtgtcttcttcgattcctttgacaacgatgggaagaaaaataac
cctgctgtgctggtggtgggaaacaatggcaaacttgtttatgatcacccaaatgatggc
acgactcaagccctgggaacatgcttaagagactttcgtaacaaaccctatcctgtcaga
gccaaaataacatactacaagaagacactaacggtgctgattaacaatgggttcacgcca
gataaggatgactatgagttctgtaccaaggtggacaacatggtcattcctcaggagggc
tactttggcatctcagctgccacgggtggtctagcaggtgatgaccatgatgtcctgtcc
ttcttgacgttcagactaacagaacctggccaagaactgcctgcacctgaagcagagatc
cccaaggaggagcaggacaagtaccaggaggaatttgaggactttcagcaggagctggac
aaaaagaaagaggactatcagaaggagcatccggaagtccagagagaacccatcgaggac
atgtacgagagtgtcaacgacagggatatccgccaggtgtttgagggtcagagccagatc
cacctggagatcaaacagcttcaccgccagatggccatgatcctcgacgaacagaaccgc
tatgtttctgtggttacagacgagatatccaaacgccaaggggagttggtgggacaggct
cctagtcaagaaatgggtgcagtggtcgcaacacaacaggagatactgagaaacctgaac
gagttgaaaaactctttccatgagtctctgaagcagatcggcgccactcagcaccaagcc
aacccagtgagcatggggacatatgagacggtgcaacacttcagcgaaatccaggaacat
ctacacgtggtcaagaggaacatcgaacaccttatcacacgcaatgggagccccagtgaa
aatcagggagagaaatgccctgaccctcctaaaatgccttcctgtctgggtactactcac
ttcttggtctttgtggtcatccaatcagtcctgttcttcagctacatcatgtacaaaagt
caacaagaagcagcagcaaagaaattcttttga
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