Salvelinus sp. IW2-2015 (Arctic char): 111961288 Help Entry 111961288         CDS       T05762                                  Symbol itga1 Name (RefSeq) integrin alpha-1   KO K06480   integrin alpha 1 Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Pathway salp04510   Focal adhesion salp04512   ECM-receptor interaction salp04518   Integrin signaling salp04810   Regulation of actin cytoskeleton salp04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:salp00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111961288 (itga1)    04518 Integrin signaling     111961288 (itga1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111961288 (itga1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111961288 (itga1)    04810 Regulation of actin cytoskeleton     111961288 (itga1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:salp04147]     111961288 (itga1)    04515 Cell adhesion molecules [BR:salp04515]     111961288 (itga1)    04090 CD molecules [BR:salp04090]     111961288 (itga1) Exosome [BR:salp04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    111961288 (itga1) Cell adhesion molecules [BR:salp04515]  Integrins   Integrin alpha subunits    111961288 (itga1) CD molecules [BR:salp04090]  Proteins   111961288 (itga1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_1 VWA_2 FG-GAP_3 FG-GAP_2 Motif Other DBs NCBI-GeneID:  111961288 NCBI-ProteinID:  XP_023839210 LinkDB All DBs Position LG4q.1:29:complement(4879609..4949811) Genome browser AA seq 1188 aa AA seqDB search MLGRMQYIKLTTALALLPCVFSFNVDDKNGLNFNGPLEDMFGYSVQQFENSEGKWVLIGS PLAGQPAKRTGDVYKCPVNRGPNPKCIKLGLPENTTIPNLHEVKENMTMGTTLVTNPQGG FLACGPQYGYMCGQQTYISGVCTNVSSTFQVLNSIAPAVQECAKELDIVMVLDGSNSIWP WNSIIEFLLKFLKNIEIGPKLSQVGIVSYGEQVIHNVNLSQFKNTQSLLGKVRNLEQQQG VRTMTFLGIDTARKEAFTVERGARPGVKKVMIIVTDGESHDSHNLKNVTAECEKDDIERF GIAVLGDYNRNNRSITEVKKFIEEIKNISSDPVGDHFFNVSDEFALLTIVDALGSRIFAL EATSGNYTSSFEMEMSQAGFSAHTSKEGVMLGAVGAYEWNGTVVMHTDQGTMVPLNADFH DPLDERKESLAGYVGYDVQSASTPNGVLYITGAPRYNHTGRVIVYKLDGKHITVTQVLKG EQIGSYFGSVLQTVDVDQDSYTDILLVGAPMYMGPEREEQGQVYVYKLNEKGMFEHQATL KPDNQTCCTSAHSHGCTAVNKNDPCGARFGTAIAEVSDLDLDGNRDVAIGAPFENDHRGA VYIYHGAKKTIKEKYVQRIPGPGDGVKTKFFGQSIHGVMDLNGDGIIDVTIGGLGGASLF WSKDVAELYANMTFDPSKINLQQPSKGCMLGGRETACVKTRVCFSYSVKSEKDDTNLGTA IKYSLTLDSLRAKSRAAFVNIDEKSERKAQATAKIIDNLCVEHLFAMKAKLDFRDPIMVS LEFGLAEDTGPVLDGNLPTSLNKTIPLVDCGTDDKCIADLSLKAVPSIQSLVIKANKEKF HVLITTRNSKDNAYNTKVMLSFTENINYVKVEPKEKDCSLNNTKVECAVGYPFLKSNVEE VFKILFEVNPAHIWKEIQINVTATSDSDEVNTTLFDNSVKISIPVKYEAGLRFTADRHMK EDHVIVKEGEQHPSVFNSTSVIGEEVKISYTISRDVDMATPPLKLRVKYPYLSPRENILL YLTHVTSSQDVTCHAGHLINPLKINHNNVHTLNLKKETLSDFLVGCKDHPCKSFGCSIPH VNNSQVTVTFRVWKPTFIKAEFTSLHMIVHATLENQNPDLFMLSTANNARDVKIQVSKEA LGGIPLWIIIVSILIGLLILALVIFALWKAGFFERKSMEDMEKEDMKN NT seq 3567 nt NT seq  +upstreamnt  +downstreamnt atgctcgggcgaatgcagtatattaaattaacgacagcactcgcgttgctaccgtgtgtg ttctcgtttaacgtggatgacaagaatgggctgaatttcaatggtccgctggaggacatg tttggatactcagtccagcagtttgagaacagtgaagggaaatgggtacttatcggttct cccctggccggccagccagccaaacggactggagatgtctacaaatgccctgtgaatcga ggaccaaaccctaaatgtatcaaactggggctgcctgaaaacacaacaataccgaactta cacgaagtcaaggaaaacatgaccatgggaacgacgttggttaccaaccctcaaggaggc tttctggcttgtggtccccagtacggctacatgtgtggtcagcagacgtacatctctggg gtctgtaccaacgtcagctcaaccttccaggtactcaactccatcgccccggccgtgcaa gagtgcgccaaagagcttgacattgtcatggtgcttgacggctccaatagtatatggcca tggaacagcatcattgagttcctgctcaagtttctgaaaaatatcgaaattggtcctaaa ctgtcccaggtgggcattgtgtcgtatggagagcaagtcattcacaatgtgaacctcagc cagtttaaaaacactcaatctctgctgggcaaagtgaggaatcttgaacagcaacagggt gtcaggaccatgaccttcctgggtattgacacggcaaggaaagaggccttcaccgtggag cgaggggcgcggcccggggtcaagaaggtcatgataatcgtgacggatggagagtcacat gactctcataacctcaaaaatgtcaccgcagaatgcgagaaagacgacattgagaggttc ggtattgctgtgcttggtgattacaacaggaacaaccgaagcatcactgaggtgaaaaag ttcattgaggagatcaagaacatctccagcgatcctgtgggagatcacttcttcaacgtg tccgacgagtttgccttgctcaccatcgtagacgctctrggaagcaggatctttgccttg gaggcaacgtcaggtaactacacctcgtcgtttgagatggagatgtcccaggcaggtttt agtgcccacacctctaaggagggtgtgatgctgggagcagtgggggcgtatgagtggaac gggacagtagtgatgcacacagaccagggtaccatggttcccctaaacgcagacttccat gaccccctggacgagaggaaggagagcctggcagggtatgtgggttatgatgtgcagtcg gcatcaacccctaatggtgtattgtatatcacgggagcaccgcggtacaaccacacaggc agagtcattgtgtacaaactggatgggaaacacatcacagtcacacaagtgctgaaagga gagcagattggatcctactttggaagcgtgctccagacggttgatgttgaccaggactcg tacacagacatcctgctggtgggagctcctatgtacatgggcccagagagggaggaacag ggacaggtgtacgtttacaaactcaatgagaagggcatgtttgagcaccaggccacgctg aagccagacaaccagacgtgttgtacctcggcccactcccatggctgcaccgccgttaat aagaatgacccgtgtggcgcccgtttcggcaccgccatcgcagaggtcagtgacctggac ctggacgggaaccgggacgtggccatcggggcaccgttcgagaatgaccacagaggagcc gtctacatctaccacggagccaagaagactatcaaggagaaatacgtccagcgtatccca ggtcctggagacggggtgaagactaagttctttggccagtcaatccatggagtcatggac ctgaacggagatggaatcatagacgttaccatcggaggtctgggaggcgcttctctgttc tggtccaaggatgttgctgagctttatgccaacatgacctttgacccgagcaagatcaac ctacagcagccctctaaaggctgtatgttgggcgggagggaaactgcgtgcgtgaagacc agggtctgctttagctacagcgtcaagtctgagaaggatgacactaacttgggcacagcc attaagtacagcttgacactggactctctgagggcgaagtcgagggctgcgtttgtcaac atagacgagaaaagtgagaggaaggcccaggccaccgccaagatcatagacaatctgtgt gtggagcatttattcgccatgaaggctaaattggacttcagagacccgatcatggtctcc ctagagtttggcctggctgaggacacgggtcccgtcctggatggaaatctaccaacgtca cttaacaaaacgattcctttggtggactgtgggaccgatgacaagtgcatagctgaccta tcgctgaaggctgtgccaagtatacaaagtcttgtgatcaaagcgaacaaggagaagttc cacgttctgatcaccactagaaacagcaaagacaatgcttacaacaccaaagttatgctg agctttactgaaaacattaactacgtcaaggtcgagcccaaagaaaaagactgcagtcta aataataccaaagttgagtgtgctgtgggatatccattcctcaaaagcaatgtagaggag gtctttaagatcctgtttgaagtcaaccctgcacatatctggaaggagattcagatcaac gtaactgcaaccagtgacagtgatgaagtgaacaccaccctttttgacaactctgtgaaa atctccatccctgtgaagtacgaggctggacttagattcacagctgacaggcacatgaag gaggaccacgtcatagtgaaagagggagagcagcaccccagcgtcttcaacagcaccagt gtgataggagaagaggtcaagatcagctacacgattagtagggatgtggatatggcgact cctcctctgaagctaagggtgaagtacccgtacctctcacccagagagaacatcctgctt tacctgactcacgtcacctcctcacaggatgtgacatgccatgccggccatctgattaac cctttaaagatcaaccacaacaatgtccacactctcaaccttaaaaaagagaccctcagt gacttcctggtgggctgtaaggaccacccatgtaagtcatttggctgctccatccctcac gtcaacaacagccaggtcactgttaccttcagggtgtggaagcccacctttatcaaagca gagttcaccagtcttcatatgatagttcatgccaccctggagaaccagaaccccgatctc ttcatgttgagtaccgctaataacgccagagatgtgaagatccaggtgtctaaagaggct ttgggaggtataccgctgtggatcattatagtcagtatcctaataggacttctcattctg gccctggtcatmttcgccctatggaaggctggatttttcgaaagaaaatccatggaggac atggagaaggaggacatgaagaattaa

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